RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 MCM3APO60318 1980 aa30.69■■■□□ 2.5
CCM2-211ENST00000478582 LRRC26Q2I0M4 334 aa30.69■■■□□ 2.5
CCM2-211ENST00000478582 MCTP2Q6DN12 878 aa30.69■■■□□ 2.5
CCM2-211ENST00000478582 TAPT1Q6NXT6 567 aa30.69■■■□□ 2.5
CCM2-211ENST00000478582 BICD2Q8TD16 824 aa30.69■■■□□ 2.5
CCM2-211ENST00000478582 PCDHA6Q9UN73 950 aa30.69■■■□□ 2.5
CCM2-211ENST00000478582 PCDHA8Q9Y5H6 950 aa30.69■■■□□ 2.5
CCM2-211ENST00000478582 RBM47A0AV96 593 aaKnown RBP30.68■■■□□ 2.5
CCM2-211ENST00000478582 SPDYE3A6NKU9 549 aa30.68■■■□□ 2.5
CCM2-211ENST00000478582 DTNBO60941 627 aa30.68■■■□□ 2.5
CCM2-211ENST00000478582 EIF3JO75822 258 aaKnown RBP30.68■■■□□ 2.5
CCM2-211ENST00000478582 MYCNP04198 464 aaPredicted RBP30.68■■■□□ 2.5
CCM2-211ENST00000478582 XBP1P17861 261 aa30.68■■■□□ 2.5
CCM2-211ENST00000478582 AP3B2Q13367 1082 aa30.68■■■□□ 2.5
CCM2-211ENST00000478582 CCDC144BQ3MJ40 725 aa30.68■■■□□ 2.5
CCM2-211ENST00000478582 GALNT17Q6IS24 598 aa30.68■■■□□ 2.5
CCM2-211ENST00000478582 ALG1Q9BT22 464 aa30.68■■■□□ 2.5
CCM2-211ENST00000478582 LRRC37A2A6NM11 1700 aa30.67■■■□□ 2.5
CCM2-211ENST00000478582 NLRP5P59047 1200 aa30.67■■■□□ 2.5
CCM2-211ENST00000478582 HMGN5P82970 282 aaKnown RBP30.67■■■□□ 2.5
CCM2-211ENST00000478582 IQSEC1Q6DN90 963 aa30.67■■■□□ 2.5
CCM2-211ENST00000478582 XRRA1Q6P2D8 792 aa30.67■■■□□ 2.5
CCM2-211ENST00000478582 CHRDL2Q6WN34 429 aa30.67■■■□□ 2.5
CCM2-211ENST00000478582 EEPD1Q7L9B9 569 aa30.67■■■□□ 2.5
CCM2-211ENST00000478582 FBXO16Q8IX29 292 aaPredicted RBP30.67■■■□□ 2.5
CCM2-211ENST00000478582 CCND2P30279 289 aa30.66■■■□□ 2.5
CCM2-211ENST00000478582 DAGLBQ8NCG7 672 aa30.66■■■□□ 2.5
CCM2-211ENST00000478582 IL31RAQ8NI17 732 aa30.66■■■□□ 2.5
CCM2-211ENST00000478582 EHMT1Q9H9B1 1298 aa30.66■■■□□ 2.5
CCM2-211ENST00000478582 STAM2O75886 525 aa30.65■■■□□ 2.5
CCM2-211ENST00000478582 PGK1P00558 417 aa30.65■■■□□ 2.5
CCM2-211ENST00000478582 PCNX4Q63HM2 1172 aa30.65■■■□□ 2.5
CCM2-211ENST00000478582 RNF180Q86T96 592 aa30.65■■■□□ 2.5
CCM2-211ENST00000478582 REXO1Q8N1G1 1221 aaKnown RBP30.65■■■□□ 2.5
CCM2-211ENST00000478582 PHF20Q9BVI0 1012 aa30.65■■■□□ 2.5
CCM2-211ENST00000478582 PDGFCQ9NRA1 345 aa30.65■■■□□ 2.5
CCM2-211ENST00000478582 PCDHA4Q9UN74 947 aa30.65■■■□□ 2.5
CCM2-211ENST00000478582 ADAMTS3O15072 1205 aa30.64■■■□□ 2.5
CCM2-211ENST00000478582 MYCLP12524 364 aaPredicted RBP30.64■■■□□ 2.5
CCM2-211ENST00000478582 NPY5RQ15761 445 aa30.64■■■□□ 2.5
CCM2-211ENST00000478582 SNX21Q969T3 373 aa30.64■■■□□ 2.5
CCM2-211ENST00000478582 TMEM260Q9NX78 707 aa30.64■■■□□ 2.5
CCM2-211ENST00000478582 ZMYND8Q9ULU4 1186 aaPredicted RBP30.64■■■□□ 2.5
CCM2-211ENST00000478582 DUSP11O75319 330 aaKnown RBP30.63■■■□□ 2.49
CCM2-211ENST00000478582 ADCYAP1R1P41586 468 aa30.63■■■□□ 2.49
CCM2-211ENST00000478582 ATN1P54259 1190 aaPredicted RBP30.63■■■□□ 2.49
CCM2-211ENST00000478582 MRPS9P82933 396 aaKnown RBP30.63■■■□□ 2.49
CCM2-211ENST00000478582 SCFD2Q8WU76 684 aa30.63■■■□□ 2.49
CCM2-211ENST00000478582 LENG1Q96BZ8 264 aaPredicted RBP30.63■■■□□ 2.49
CCM2-211ENST00000478582 ANO3Q9BYT9 981 aa30.63■■■□□ 2.49
CCM2-211ENST00000478582 PRO3102Q9H379 93 aa30.63■■■□□ 2.49
CCM2-211ENST00000478582 ADAMTS4O75173 837 aa30.62■■■□□ 2.49
CCM2-211ENST00000478582 TNFAIP2Q03169 654 aa30.62■■■□□ 2.49
CCM2-211ENST00000478582 JAKMIP3Q5VZ66 844 aa30.62■■■□□ 2.49
CCM2-211ENST00000478582 SLC39A5Q6ZMH5 540 aa30.62■■■□□ 2.49
CCM2-211ENST00000478582 BLIDQ8IZY5 108 aa30.62■■■□□ 2.49
CCM2-211ENST00000478582 KCNJ14Q9UNX9 436 aa30.62■■■□□ 2.49
CCM2-211ENST00000478582 PHF24Q9UPV7 400 aa30.62■■■□□ 2.49
CCM2-211ENST00000478582 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.61■■■□□ 2.49
CCM2-211ENST00000478582 M0R2N6 131 aa30.61■■■□□ 2.49
CCM2-211ENST00000478582 ADCY6O43306 1168 aa30.61■■■□□ 2.49
CCM2-211ENST00000478582 RGS20O76081 388 aa30.61■■■□□ 2.49
CCM2-211ENST00000478582 CUL4AQ13619 759 aa30.61■■■□□ 2.49
CCM2-211ENST00000478582 WDR11Q9BZH6 1224 aa30.61■■■□□ 2.49
CCM2-211ENST00000478582 GJB4Q9NTQ9 266 aa30.61■■■□□ 2.49
CCM2-211ENST00000478582 GNEQ9Y223 722 aaKnown RBP30.61■■■□□ 2.49
CCM2-211ENST00000478582 Q9Y3F1 56 aa30.61■■■□□ 2.49
CCM2-211ENST00000478582 SMPD1P17405 629 aa30.6■■■□□ 2.49
CCM2-211ENST00000478582 SYN1P17600 705 aa30.6■■■□□ 2.49
CCM2-211ENST00000478582 SREBF1P36956 1147 aa30.6■■■□□ 2.49
CCM2-211ENST00000478582 DUSP28Q4G0W2 176 aa30.6■■■□□ 2.49
CCM2-211ENST00000478582 INPP4AQ96PE3 977 aaPredicted RBP30.6■■■□□ 2.49
CCM2-211ENST00000478582 TSEN34Q9BSV6 310 aaKnown RBP30.6■■■□□ 2.49
CCM2-211ENST00000478582 SYNRGQ9UMZ2 1314 aa30.6■■■□□ 2.49
CCM2-211ENST00000478582 TTLL4Q14679 1199 aa30.59■■■□□ 2.49
CCM2-211ENST00000478582 CCDC62Q6P9F0 684 aa30.59■■■□□ 2.49
CCM2-211ENST00000478582 SEPT14Q6ZU15 432 aa30.59■■■□□ 2.49
CCM2-211ENST00000478582 KLHDC9Q8NEP7 349 aa30.59■■■□□ 2.49
CCM2-211ENST00000478582 CRYGNQ8WXF5 182 aa30.59■■■□□ 2.49
CCM2-211ENST00000478582 FERMT2Q96AC1 680 aa30.59■■■□□ 2.49
CCM2-211ENST00000478582 PGBD1Q96JS3 809 aa30.59■■■□□ 2.49
CCM2-211ENST00000478582 NKRFO15226 690 aaKnown RBP eCLIP30.58■■■□□ 2.49
CCM2-211ENST00000478582 RTP1P59025 263 aa30.58■■■□□ 2.49
CCM2-211ENST00000478582 NKX3-2P78367 333 aa30.58■■■□□ 2.49
CCM2-211ENST00000478582 KCNV1Q6PIU1 500 aa30.58■■■□□ 2.49
CCM2-211ENST00000478582 RASGRP4Q8TDF6 673 aa30.58■■■□□ 2.49
CCM2-211ENST00000478582 UPF3AQ9H1J1 476 aaKnown RBP30.58■■■□□ 2.49
CCM2-211ENST00000478582 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.58■■■□□ 2.49
CCM2-211ENST00000478582 K7ELQ4 463 aaPredicted RBP30.57■■■□□ 2.48
CCM2-211ENST00000478582 TGFB3P10600 412 aa30.57■■■□□ 2.48
CCM2-211ENST00000478582 ICAM3P32942 547 aa30.57■■■□□ 2.48
CCM2-211ENST00000478582 SNX17Q15036 470 aa30.57■■■□□ 2.48
CCM2-211ENST00000478582 GNPTABQ3T906 1256 aa30.57■■■□□ 2.48
CCM2-211ENST00000478582 FAM184AQ8NB25 1140 aa30.57■■■□□ 2.48
CCM2-211ENST00000478582 GDF15Q99988 308 aa30.57■■■□□ 2.48
CCM2-211ENST00000478582 SPC25Q9HBM1 224 aa30.57■■■□□ 2.48
CCM2-211ENST00000478582 UBIAD1Q9Y5Z9 338 aa30.57■■■□□ 2.48
CCM2-211ENST00000478582 CYP3A4P08684 503 aa30.56■■■□□ 2.48
CCM2-211ENST00000478582 TXNP10599 105 aaKnown RBP30.56■■■□□ 2.48
CCM2-211ENST00000478582 GJA9P57773 515 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms