RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 KCNJ6P48051 423 aa6.66□□□□□ -1.34
UBR3-209ENST00000477461 ZNF143P52747 638 aaPredicted RBP6.66□□□□□ -1.34
UBR3-209ENST00000477461 TTLL7Q6ZT98 887 aa6.66□□□□□ -1.34
UBR3-209ENST00000477461 MILR1Q7Z6M3 343 aa6.66□□□□□ -1.34
UBR3-209ENST00000477461 VPS37DQ86XT2 251 aa6.66□□□□□ -1.34
UBR3-209ENST00000477461 DCP2Q8IU60 420 aaKnown RBP6.66□□□□□ -1.34
UBR3-209ENST00000477461 CCDC103Q8IW40 242 aa6.66□□□□□ -1.34
UBR3-209ENST00000477461 TRMT2BQ96GJ1 504 aaKnown RBP6.66□□□□□ -1.34
UBR3-209ENST00000477461 CHAMP1Q96JM3 812 aa6.66□□□□□ -1.34
UBR3-209ENST00000477461 PALD1Q9ULE6 856 aa6.66□□□□□ -1.34
UBR3-209ENST00000477461 SMARCA5O60264 1052 aaPredicted RBP6.65□□□□□ -1.34
UBR3-209ENST00000477461 STAT5AP42229 794 aa6.65□□□□□ -1.34
UBR3-209ENST00000477461 GJA9P57773 515 aa6.65□□□□□ -1.34
UBR3-209ENST00000477461 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
UBR3-209ENST00000477461 RPL11P62913 178 aaKnown RBP6.65□□□□□ -1.34
UBR3-209ENST00000477461 ETV3LQ6ZN32 361 aa6.65□□□□□ -1.34
UBR3-209ENST00000477461 ZNF227Q86WZ6 799 aa6.65□□□□□ -1.34
UBR3-209ENST00000477461 DIO2Q92813 273 aa6.65□□□□□ -1.34
UBR3-209ENST00000477461 NTMQ9P121 344 aa6.65□□□□□ -1.34
UBR3-209ENST00000477461 LCP1P13796 627 aa6.64□□□□□ -1.35
UBR3-209ENST00000477461 HOXC12P31275 282 aa6.64□□□□□ -1.35
UBR3-209ENST00000477461 NFKB2Q00653 900 aa6.64□□□□□ -1.35
UBR3-209ENST00000477461 IQCEQ6IPM2 695 aa6.64□□□□□ -1.35
UBR3-209ENST00000477461 GGNQ86UU5 652 aa6.64□□□□□ -1.35
UBR3-209ENST00000477461 ZNF761Q86XN6 746 aaPredicted RBP6.64□□□□□ -1.35
UBR3-209ENST00000477461 RCBTB1Q8NDN9 531 aa6.64□□□□□ -1.35
UBR3-209ENST00000477461 C11orf84Q9BUA3 381 aaPredicted RBP6.64□□□□□ -1.35
UBR3-209ENST00000477461 FBXL7Q9UJT9 491 aa6.64□□□□□ -1.35
UBR3-209ENST00000477461 PCDHA2Q9Y5H9 948 aa6.64□□□□□ -1.35
UBR3-209ENST00000477461 MEFVO15553 781 aaPredicted RBP6.63□□□□□ -1.35
UBR3-209ENST00000477461 SUSD5O60279 629 aa6.63□□□□□ -1.35
UBR3-209ENST00000477461 ABCC9O60706 1549 aa6.63□□□□□ -1.35
UBR3-209ENST00000477461 ZFYVE27Q5T4F4 411 aa6.63□□□□□ -1.35
UBR3-209ENST00000477461 MCTP2Q6DN12 878 aa6.63□□□□□ -1.35
UBR3-209ENST00000477461 MRM1Q6IN84 353 aaKnown RBP6.63□□□□□ -1.35
UBR3-209ENST00000477461 NLRP10Q86W26 655 aa6.63□□□□□ -1.35
UBR3-209ENST00000477461 KREMEN2Q8NCW0 462 aa6.63□□□□□ -1.35
UBR3-209ENST00000477461 ADAMTS17Q8TE56 1095 aa6.63□□□□□ -1.35
UBR3-209ENST00000477461 SEC14L1Q92503 715 aa6.63□□□□□ -1.35
UBR3-209ENST00000477461 ST7Q9NRC1 585 aa6.63□□□□□ -1.35
UBR3-209ENST00000477461 JAG2Q9Y219 1238 aa6.63□□□□□ -1.35
UBR3-209ENST00000477461 DENND5AQ6IQ26 1287 aa6.62□□□□□ -1.35
UBR3-209ENST00000477461 LINC00482Q8N8I6 264 aa6.62□□□□□ -1.35
UBR3-209ENST00000477461 TMEM169Q96HH4 297 aa6.62□□□□□ -1.35
UBR3-209ENST00000477461 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.35
UBR3-209ENST00000477461 YIPF4Q9BSR8 244 aa6.62□□□□□ -1.35
UBR3-209ENST00000477461 KRTAP4-5Q9BYR2 181 aa6.62□□□□□ -1.35
UBR3-209ENST00000477461 LNPKQ9C0E8 428 aa6.62□□□□□ -1.35
UBR3-209ENST00000477461 PRKAG3Q9UGI9 489 aa6.62□□□□□ -1.35
UBR3-209ENST00000477461 MYO1BO43795 1136 aa6.61□□□□□ -1.35
UBR3-209ENST00000477461 ADRB1P08588 477 aa6.61□□□□□ -1.35
UBR3-209ENST00000477461 GRIA2P42262 883 aa6.61□□□□□ -1.35
UBR3-209ENST00000477461 FXNQ16595 210 aa6.61□□□□□ -1.35
UBR3-209ENST00000477461 TNNI3KQ59H18 835 aa6.61□□□□□ -1.35
UBR3-209ENST00000477461 MROH9Q5TGP6 573 aa6.61□□□□□ -1.35
UBR3-209ENST00000477461 DBX2Q6ZNG2 339 aa6.61□□□□□ -1.35
UBR3-209ENST00000477461 PPIL6Q8IXY8 311 aa6.61□□□□□ -1.35
UBR3-209ENST00000477461 KYQ8NBH2 561 aa6.61□□□□□ -1.35
UBR3-209ENST00000477461 TMEM145Q8NBT3 493 aa6.61□□□□□ -1.35
UBR3-209ENST00000477461 K7ESM1 405 aa6.6□□□□□ -1.35
UBR3-209ENST00000477461 DDX3XO00571 662 aaKnown RBP eCLIP6.6□□□□□ -1.35
UBR3-209ENST00000477461 GJB6O95452 261 aa6.6□□□□□ -1.35
UBR3-209ENST00000477461 INSRRP14616 1297 aa6.6□□□□□ -1.35
UBR3-209ENST00000477461 THBS2P35442 1172 aa6.6□□□□□ -1.35
UBR3-209ENST00000477461 RGL3Q3MIN7 710 aa6.6□□□□□ -1.35
UBR3-209ENST00000477461 SPATS1Q496A3 300 aa6.6□□□□□ -1.35
UBR3-209ENST00000477461 E4F1Q66K89 784 aaPredicted RBP6.6□□□□□ -1.35
UBR3-209ENST00000477461 ZC3H18Q86VM9 953 aaKnown RBP6.6□□□□□ -1.35
UBR3-209ENST00000477461 ZNF428Q96B54 188 aa6.6□□□□□ -1.35
UBR3-209ENST00000477461 CLDND1Q9NY35 253 aa6.6□□□□□ -1.35
UBR3-209ENST00000477461 COA3Q9Y2R0 106 aaPredicted RBP6.6□□□□□ -1.35
UBR3-209ENST00000477461 X6R8D5 127 aa6.6□□□□□ -1.35
UBR3-209ENST00000477461 RPL13P26373 211 aaKnown RBP6.59□□□□□ -1.35
UBR3-209ENST00000477461 ITGA1P56199 1179 aa6.59□□□□□ -1.35
UBR3-209ENST00000477461 EFEMP1Q12805 493 aa6.59□□□□□ -1.35
UBR3-209ENST00000477461 GNL2Q13823 731 aaKnown RBP6.59□□□□□ -1.35
UBR3-209ENST00000477461 HHIPL2Q6UWX4 724 aa6.59□□□□□ -1.35
UBR3-209ENST00000477461 MIB1Q86YT6 1006 aa6.59□□□□□ -1.35
UBR3-209ENST00000477461 FAM126BQ8IXS8 530 aa6.59□□□□□ -1.35
UBR3-209ENST00000477461 ARRDC4Q8NCT1 418 aa6.59□□□□□ -1.35
UBR3-209ENST00000477461 CCDC140Q96MF4 163 aa6.59□□□□□ -1.35
UBR3-209ENST00000477461 ZSWIM3Q96MP5 696 aa6.59□□□□□ -1.35
UBR3-209ENST00000477461 ZNF408Q9H9D4 720 aa6.59□□□□□ -1.35
UBR3-209ENST00000477461 CPP00450 1065 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 SCG5P05408 212 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 DNAJA1P31689 397 aaKnown RBP6.58□□□□□ -1.36
UBR3-209ENST00000477461 LTBRP36941 435 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 SLC6A11P48066 632 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 GTF2A2P52657 109 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 GFRA1P56159 465 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 NKX3-2P78367 333 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 KCNAB2Q13303 367 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 LSAMPQ13449 338 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 CR1LQ2VPA4 569 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 RIOX2Q8IUF8 465 aa6.58□□□□□ -1.36
UBR3-209ENST00000477461 HGSO14964 777 aaPredicted RBP6.57□□□□□ -1.36
UBR3-209ENST00000477461 STEAP3Q658P3 488 aa6.57□□□□□ -1.36
UBR3-209ENST00000477461 TTLL6Q8N841 843 aa6.57□□□□□ -1.36
UBR3-209ENST00000477461 TXNDC5Q8NBS9 432 aaKnown RBP6.57□□□□□ -1.36
UBR3-209ENST00000477461 HNRNPLLQ8WVV9 542 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms