RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 PSTPIP2Q9H939 334 aa20.2■□□□□ 0.82
SREBF1-211ENST00000476994 C6orf50Q9HD87 102 aa20.2■□□□□ 0.82
SREBF1-211ENST00000476994 A1CFQ9NQ94 594 aaKnown RBP20.2■□□□□ 0.82
SREBF1-211ENST00000476994 NRBP1Q9UHY1 535 aa20.2■□□□□ 0.82
SREBF1-211ENST00000476994 VPS37CA5D8V6 355 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-211ENST00000476994 BTBD18B2RXH4 712 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 H3BQV1 296 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 PDIA4P13667 645 aaKnown RBP20.19■□□□□ 0.82
SREBF1-211ENST00000476994 U2AF2P26368 475 aaKnown RBP eCLIP20.19■□□□□ 0.82
SREBF1-211ENST00000476994 GNA11P29992 359 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 MDM2Q00987 491 aaPredicted RBP20.19■□□□□ 0.82
SREBF1-211ENST00000476994 RESTQ13127 1097 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 NR5A1Q13285 461 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 UBE2SQ16763 222 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 USP17L6PQ6QN14 398 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 SAMD3Q8N6K7 520 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 RASGRP4Q8TDF6 673 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 COL20A1Q9P218 1284 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 FBXO40Q9UH90 709 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 PCDHA6Q9UN73 950 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 PCDHA8Q9Y5H6 950 aa20.19■□□□□ 0.82
SREBF1-211ENST00000476994 ZSCAN22P10073 491 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-211ENST00000476994 KRT2P35908 639 aa20.18■□□□□ 0.82
SREBF1-211ENST00000476994 MRPL12P52815 198 aaKnown RBP20.18■□□□□ 0.82
SREBF1-211ENST00000476994 EARS2Q5JPH6 523 aaKnown RBP20.18■□□□□ 0.82
SREBF1-211ENST00000476994 SLC30A10Q6XR72 485 aa20.18■□□□□ 0.82
SREBF1-211ENST00000476994 GLT8D2Q9H1C3 349 aa20.18■□□□□ 0.82
SREBF1-211ENST00000476994 FOXP1Q9H334 677 aaPredicted RBP20.18■□□□□ 0.82
SREBF1-211ENST00000476994 CYP39A1Q9NYL5 469 aa20.18■□□□□ 0.82
SREBF1-211ENST00000476994 DIS3Q9Y2L1 958 aaKnown RBP20.18■□□□□ 0.82
SREBF1-211ENST00000476994 IGHA2P01877 340 aa20.17■□□□□ 0.82
SREBF1-211ENST00000476994 RARBP10826 455 aa20.17■□□□□ 0.82
SREBF1-211ENST00000476994 HOXA13P31271 388 aaPredicted RBP20.17■□□□□ 0.82
SREBF1-211ENST00000476994 RTP1P59025 263 aa20.17■□□□□ 0.82
SREBF1-211ENST00000476994 RPS6P62753 249 aaKnown RBP20.17■□□□□ 0.82
SREBF1-211ENST00000476994 ANO1Q5XXA6 986 aa20.17■□□□□ 0.82
SREBF1-211ENST00000476994 MCF2L2Q86YR7 1114 aa20.17■□□□□ 0.82
SREBF1-211ENST00000476994 REXO1Q8N1G1 1221 aaKnown RBP20.17■□□□□ 0.82
SREBF1-211ENST00000476994 DEFB123Q8N688 67 aa20.17■□□□□ 0.82
SREBF1-211ENST00000476994 SYTL5Q8TDW5 730 aaPredicted RBP20.17■□□□□ 0.82
SREBF1-211ENST00000476994 TMEM260Q9NX78 707 aa20.17■□□□□ 0.82
SREBF1-211ENST00000476994 MAP3K20Q9NYL2 800 aaKnown RBP20.17■□□□□ 0.82
SREBF1-211ENST00000476994 ATP11BQ9Y2G3 1177 aa20.17■□□□□ 0.82
SREBF1-211ENST00000476994 DNAJC25-GNG10A0A024R161 153 aa20.16■□□□□ 0.82
SREBF1-211ENST00000476994 FAM205CA6NFA0 338 aa20.16■□□□□ 0.82
SREBF1-211ENST00000476994 GCOM1H8Y6P7 765 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-211ENST00000476994 EDIL3O43854 480 aa20.16■□□□□ 0.82
SREBF1-211ENST00000476994 CFBP00751 764 aa20.16■□□□□ 0.82
SREBF1-211ENST00000476994 POLR2MP0CAP2 368 aa20.16■□□□□ 0.82
SREBF1-211ENST00000476994 BAATQ14032 418 aaPredicted RBP20.16■□□□□ 0.82
SREBF1-211ENST00000476994 PRAMEF19Q5SWL8 479 aa20.16■□□□□ 0.82
SREBF1-211ENST00000476994 BICD2Q8TD16 824 aa20.16■□□□□ 0.82
SREBF1-211ENST00000476994 TINF2Q9BSI4 451 aa20.16■□□□□ 0.82
SREBF1-211ENST00000476994 CNPY2Q9Y2B0 182 aa20.16■□□□□ 0.82
SREBF1-211ENST00000476994 FRMPD4Q14CM0 1322 aa20.16■□□□□ 0.82
SREBF1-211ENST00000476994 F13A1P00488 732 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 AP3B2Q13367 1082 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 SAFBQ15424 915 aaKnown RBP eCLIP20.15■□□□□ 0.82
SREBF1-211ENST00000476994 JAKMIP3Q5VZ66 844 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 NSMFQ6X4W1 530 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 RNF207Q6ZRF8 634 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 RNF180Q86T96 592 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 FERMT3Q86UX7 667 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 FAM133AQ8N9E0 248 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 SLC17A8Q8NDX2 589 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 CRYGNQ8WXF5 182 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 FGD4Q96M96 766 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 CHMP5Q9NZZ3 219 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 ASTN1O14525 1302 aa20.15■□□□□ 0.82
SREBF1-211ENST00000476994 LTBP2Q14767 1821 aa20.14■□□□□ 0.81
SREBF1-211ENST00000476994 PGK2P07205 417 aa20.14■□□□□ 0.81
SREBF1-211ENST00000476994 NUCB2P80303 420 aa20.14■□□□□ 0.81
SREBF1-211ENST00000476994 SLC39A5Q6ZMH5 540 aa20.14■□□□□ 0.81
SREBF1-211ENST00000476994 NOSTRINQ8IVI9 506 aa20.14■□□□□ 0.81
SREBF1-211ENST00000476994 PGBD1Q96JS3 809 aa20.14■□□□□ 0.81
SREBF1-211ENST00000476994 PURBQ96QR8 312 aaKnown RBP20.14■□□□□ 0.81
SREBF1-211ENST00000476994 BRMS1Q9HCU9 246 aa20.14■□□□□ 0.81
SREBF1-211ENST00000476994 XPNPEP3Q9NQH7 507 aa20.14■□□□□ 0.81
SREBF1-211ENST00000476994 PRDM5Q9NQX1 630 aaPredicted RBP20.14■□□□□ 0.81
SREBF1-211ENST00000476994 ADCYAP1R1P41586 468 aa20.13■□□□□ 0.81
SREBF1-211ENST00000476994 LRRC41Q15345 812 aa20.13■□□□□ 0.81
SREBF1-211ENST00000476994 MCTP1Q6DN14 999 aa20.13■□□□□ 0.81
SREBF1-211ENST00000476994 MSL3Q8N5Y2 521 aaKnown RBP20.13■□□□□ 0.81
SREBF1-211ENST00000476994 ANO3Q9BYT9 981 aa20.13■□□□□ 0.81
SREBF1-211ENST00000476994 FOSP01100 380 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-211ENST00000476994 AKR1A1P14550 325 aa20.12■□□□□ 0.81
SREBF1-211ENST00000476994 ZNF792Q3KQV3 632 aa20.12■□□□□ 0.81
SREBF1-211ENST00000476994 FOXD4L5Q5VV16 416 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-211ENST00000476994 KRT25Q7Z3Z0 450 aa20.12■□□□□ 0.81
SREBF1-211ENST00000476994 BRAPQ7Z569 592 aa20.12■□□□□ 0.81
SREBF1-211ENST00000476994 ANKRD35Q8N283 1001 aa20.12■□□□□ 0.81
SREBF1-211ENST00000476994 FOXD4L4Q8WXT5 416 aaPredicted RBP20.12■□□□□ 0.81
SREBF1-211ENST00000476994 TAAR1Q96RJ0 339 aa20.12■□□□□ 0.81
SREBF1-211ENST00000476994 SOWAHBA6NEL2 793 aa20.11■□□□□ 0.81
SREBF1-211ENST00000476994 WNT7AO00755 349 aa20.11■□□□□ 0.81
SREBF1-211ENST00000476994 SREBF1P36956 1147 aa20.11■□□□□ 0.81
SREBF1-211ENST00000476994 TOB1P50616 345 aaPredicted RBP20.11■□□□□ 0.81
SREBF1-211ENST00000476994 CNTN2Q02246 1040 aa20.11■□□□□ 0.81
SREBF1-211ENST00000476994 MCTP2Q6DN12 878 aa20.11■□□□□ 0.81
SREBF1-211ENST00000476994 PIK3AP1Q6ZUJ8 805 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms