RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 ENAHQ8N8S7 591 aaPredicted RBP12.64□□□□□ -0.39
CDRT1-205ENST00000475944 TBC1D5Q92609 795 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 DSCC1Q9BVC3 393 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 KATNAL1Q9BW62 490 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 KRT23Q9C075 422 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 CNNM2Q9H8M5 875 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 ZSWIM5Q9P217 1185 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 COL20A1Q9P218 1284 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 CTNNA3Q9UI47 895 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 MTCH2Q9Y6C9 303 aa12.64□□□□□ -0.39
CDRT1-205ENST00000475944 MYO9BQ13459 2157 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 TLL1O43897 1013 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 CFBP00751 764 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 SELPP16109 830 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 EIF2AK2P19525 551 aaKnown RBP12.63□□□□□ -0.39
CDRT1-205ENST00000475944 TAP1Q03518 808 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 RBL2Q08999 1139 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 LRRC8DQ7L1W4 858 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 ARNTL2Q8WYA1 636 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 EMID1Q96A84 441 aaPredicted RBP12.63□□□□□ -0.39
CDRT1-205ENST00000475944 UBAC1Q9BSL1 405 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 CERS4Q9HA82 394 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 GTF2IRD1Q9UHL9 959 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 DDX41Q9UJV9 622 aaKnown RBP12.63□□□□□ -0.39
CDRT1-205ENST00000475944 MRVI1Q9Y6F6 885 aa12.63□□□□□ -0.39
CDRT1-205ENST00000475944 KIAA1217Q5T5P2 1943 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 TTC28Q96AY4 2481 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 RFXAPO00287 272 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 EIF3JO75822 258 aaKnown RBP12.62□□□□□ -0.39
CDRT1-205ENST00000475944 NR3C2P08235 984 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 COL9A1P20849 921 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 LAMC2Q13753 1193 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 IFIT1BQ5T764 474 aaKnown RBP12.62□□□□□ -0.39
CDRT1-205ENST00000475944 CNKSR3Q6P9H4 555 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 C7orf31Q8N865 590 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 PPTC7Q8NI37 304 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 KAT2BQ92831 832 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 CTAGE1Q96RT6 745 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 AMNQ9BXJ7 453 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 JMJD4Q9H9V9 463 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 VAT1LQ9HCJ6 419 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 PXMP2Q9NR77 195 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 MAP3K20Q9NYL2 800 aaKnown RBP12.62□□□□□ -0.39
CDRT1-205ENST00000475944 COG5Q9UP83 839 aa12.62□□□□□ -0.39
CDRT1-205ENST00000475944 CHD7Q9P2D1 2997 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 EPOPA6NHQ4 379 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 EFCAB14O75071 495 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 F2P00734 622 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 CKBP12277 381 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 BMP1P13497 986 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 PSEN2P49810 448 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 HSD17B4P51659 736 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 WDR5P61964 334 aaKnown RBP12.61□□□□□ -0.39
CDRT1-205ENST00000475944 NUCB1Q02818 461 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 TFF2Q03403 129 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 KCNV1Q6PIU1 500 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 DHX37Q8IY37 1157 aaKnown RBP12.61□□□□□ -0.39
CDRT1-205ENST00000475944 SAMD3Q8N6K7 520 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 ZBED2Q9BTP6 218 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 HDAC6Q9UBN7 1215 aa12.61□□□□□ -0.39
CDRT1-205ENST00000475944 MYH6P13533 1939 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 ABHD14A-ACY1A0A1B0GW23 586 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 KLRF2D3W0D1 207 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 HAS3O00219 553 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 ARHGEF15O94989 841 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 CXCL10P02778 98 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 GHRHRQ02643 423 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 TRAF1Q13077 416 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 PTK7Q13308 1070 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 MFSD10Q14728 455 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 KIAA0753Q2KHM9 967 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 STAG2Q8N3U4 1231 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 DHX38Q92620 1227 aaKnown RBP12.6□□□□□ -0.39
CDRT1-205ENST00000475944 ALG1Q9BT22 464 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
CDRT1-205ENST00000475944 COL4A4P53420 1690 aaPredicted RBP12.59□□□□□ -0.39
CDRT1-205ENST00000475944 OPLAHO14841 1288 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 ZBTB5O15062 677 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 NBNO60934 754 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 ZNF286BP0CG31 522 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 MYCLP12524 364 aaPredicted RBP12.59□□□□□ -0.39
CDRT1-205ENST00000475944 KCNQ1P51787 676 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 GRB10Q13322 594 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 IKBKEQ14164 716 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 GPNMBQ14956 572 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 KRT40Q6A162 431 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 MTMR8Q96EF0 704 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 NECAB3Q96P71 396 aaPredicted RBP12.59□□□□□ -0.39
CDRT1-205ENST00000475944 PDCD2LQ9BRP1 358 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 PCDHA1Q9Y5I3 950 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 TRIP12Q14669 1992 aaPredicted RBP12.59□□□□□ -0.39
CDRT1-205ENST00000475944 TET1Q8NFU7 2136 aa12.59□□□□□ -0.39
CDRT1-205ENST00000475944 PTPRSQ13332 1948 aa12.58□□□□□ -0.39
CDRT1-205ENST00000475944 LCHNA4D1U4 455 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 GJB5O95377 273 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 GGPS1O95749 300 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 IGHDP01880 384 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms