RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
ITGB5-205ENST00000474838 COL6A3P12111 3177 aa18.72■□□□□ 0.59
ITGB5-205ENST00000474838 SH2B2O14492 632 aaPredicted RBP18.72■□□□□ 0.59
ITGB5-205ENST00000474838 DNAJB2P25686 324 aa18.72■□□□□ 0.59
ITGB5-205ENST00000474838 CCL23P55773 120 aa18.72■□□□□ 0.59
ITGB5-205ENST00000474838 PGM5Q15124 567 aa18.72■□□□□ 0.59
ITGB5-205ENST00000474838 NECTIN1Q15223 517 aa18.72■□□□□ 0.59
ITGB5-205ENST00000474838 TMTC2Q8N394 836 aa18.72■□□□□ 0.59
ITGB5-205ENST00000474838 MYL10Q9BUA6 226 aa18.72■□□□□ 0.59
ITGB5-205ENST00000474838 DDX41Q9UJV9 622 aaKnown RBP18.72■□□□□ 0.59
ITGB5-205ENST00000474838 CCDC69A6NI79 296 aa18.71■□□□□ 0.59
ITGB5-205ENST00000474838 CYP2C9P11712 490 aa18.71■□□□□ 0.59
ITGB5-205ENST00000474838 MYCLP12524 364 aaPredicted RBP18.71■□□□□ 0.59
ITGB5-205ENST00000474838 NFXL1Q6ZNB6 911 aa18.71■□□□□ 0.59
ITGB5-205ENST00000474838 SKAP1Q86WV1 359 aa18.71■□□□□ 0.59
ITGB5-205ENST00000474838 SLC17A8Q8NDX2 589 aa18.71■□□□□ 0.59
ITGB5-205ENST00000474838 HERVK_113Q902F9 699 aa18.71■□□□□ 0.59
ITGB5-205ENST00000474838 RRP36Q96EU6 259 aaKnown RBP18.71■□□□□ 0.59
ITGB5-205ENST00000474838 CDX2Q99626 313 aaPredicted RBP18.71■□□□□ 0.59
ITGB5-205ENST00000474838 LZTS2Q9BRK4 669 aa18.71■□□□□ 0.59
ITGB5-205ENST00000474838 MTIF3Q9H2K0 278 aaKnown RBP18.71■□□□□ 0.59
ITGB5-205ENST00000474838 RGS20O76081 388 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 FGBP02675 491 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 SMARCA1P28370 1054 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 CCND2P30279 289 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 LIFRP42702 1097 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 GNAQP50148 359 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 LAMC2Q13753 1193 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 DGKDQ16760 1214 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 RNF20Q5VTR2 975 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 KCNV1Q6PIU1 500 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 VSIG10LQ86VR7 867 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 IL31RAQ8NI17 732 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 PPTC7Q8NI37 304 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 SEC63Q9UGP8 760 aaKnown RBP18.7■□□□□ 0.58
ITGB5-205ENST00000474838 FRMPD4Q14CM0 1322 aa18.7■□□□□ 0.58
ITGB5-205ENST00000474838 CALM1P0DP23 149 aa18.69■□□□□ 0.58
ITGB5-205ENST00000474838 CALM2P0DP24 149 aa18.69■□□□□ 0.58
ITGB5-205ENST00000474838 CALM3P0DP25 149 aa18.69■□□□□ 0.58
ITGB5-205ENST00000474838 CASTP20810 708 aaKnown RBP18.69■□□□□ 0.58
ITGB5-205ENST00000474838 COL9A3Q14050 684 aaPredicted RBP18.69■□□□□ 0.58
ITGB5-205ENST00000474838 SESTD1Q86VW0 696 aa18.69■□□□□ 0.58
ITGB5-205ENST00000474838 FCHSD1Q86WN1 690 aa18.69■□□□□ 0.58
ITGB5-205ENST00000474838 RPUSD2Q8IZ73 545 aaKnown RBP18.69■□□□□ 0.58
ITGB5-205ENST00000474838 PIBF1Q8WXW3 757 aa18.69■□□□□ 0.58
ITGB5-205ENST00000474838 SCLYQ96I15 445 aa18.69■□□□□ 0.58
ITGB5-205ENST00000474838 PITPNM1O00562 1244 aa18.68■□□□□ 0.58
ITGB5-205ENST00000474838 CDC45O75419 566 aa18.68■□□□□ 0.58
ITGB5-205ENST00000474838 PLEKHA8P1O95397 391 aa18.68■□□□□ 0.58
ITGB5-205ENST00000474838 PFKMP08237 780 aa18.68■□□□□ 0.58
ITGB5-205ENST00000474838 DHX37Q8IY37 1157 aaKnown RBP18.68■□□□□ 0.58
ITGB5-205ENST00000474838 PPP1R13LQ8WUF5 828 aa18.68■□□□□ 0.58
ITGB5-205ENST00000474838 KAT2BQ92831 832 aa18.68■□□□□ 0.58
ITGB5-205ENST00000474838 TIFAQ96CG3 184 aa18.68■□□□□ 0.58
ITGB5-205ENST00000474838 CXXC1Q9P0U4 656 aaPredicted RBP18.68■□□□□ 0.58
ITGB5-205ENST00000474838 NOD1Q9Y239 953 aa18.68■□□□□ 0.58
ITGB5-205ENST00000474838 TANC1Q9C0D5 1861 aa18.68■□□□□ 0.58
ITGB5-205ENST00000474838 BAZ2BQ9UIF8 2168 aaKnown RBP18.68■□□□□ 0.58
ITGB5-205ENST00000474838 TGFB3P10600 412 aa18.67■□□□□ 0.58
ITGB5-205ENST00000474838 HOXD8P13378 290 aaPredicted RBP18.67■□□□□ 0.58
ITGB5-205ENST00000474838 UBA1P22314 1058 aaKnown RBP18.67■□□□□ 0.58
ITGB5-205ENST00000474838 CHMP4BP1P59074 171 aa18.67■□□□□ 0.58
ITGB5-205ENST00000474838 KATNAL1Q9BW62 490 aa18.67■□□□□ 0.58
ITGB5-205ENST00000474838 PBX4Q9BYU1 374 aa18.67■□□□□ 0.58
ITGB5-205ENST00000474838 SLC12A7Q9Y666 1083 aa18.67■□□□□ 0.58
ITGB5-205ENST00000474838 GRXCR1A8MXD5 290 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 STAM2O75886 525 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 GGPS1O95749 300 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 F2P00734 622 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 RXRAP19793 462 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 RFC2P35250 354 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 BFSP2Q13515 415 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 PTGISQ16647 500 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 GNPTABQ3T906 1256 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 CELF3Q5SZQ8 465 aaKnown RBP18.66■□□□□ 0.58
ITGB5-205ENST00000474838 MYSM1Q5VVJ2 828 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 OTOP2Q7RTS6 562 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 SGMS1Q86VZ5 419 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 SRBD1Q8N5C6 995 aaKnown RBP18.66■□□□□ 0.58
ITGB5-205ENST00000474838 CCDC155Q8N6L0 562 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 MYLIPQ8WY64 445 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 CUL5Q93034 780 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 VWCEQ96DN2 955 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 SPATA33Q96N06 139 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 LRRC2Q9BYS8 371 aa18.66■□□□□ 0.58
ITGB5-205ENST00000474838 PIK3CDO00329 1044 aa18.65■□□□□ 0.58
ITGB5-205ENST00000474838 ZNF286BP0CG31 522 aa18.65■□□□□ 0.58
ITGB5-205ENST00000474838 PBX2P40425 430 aa18.65■□□□□ 0.58
ITGB5-205ENST00000474838 PSEN2P49810 448 aa18.65■□□□□ 0.58
ITGB5-205ENST00000474838 RAB30Q15771 203 aa18.65■□□□□ 0.58
ITGB5-205ENST00000474838 GDF6Q6KF10 455 aaPredicted RBP18.65■□□□□ 0.58
ITGB5-205ENST00000474838 RETREG2Q8NC44 543 aa18.65■□□□□ 0.58
ITGB5-205ENST00000474838 SMARCC2Q8TAQ2 1214 aa18.65■□□□□ 0.58
ITGB5-205ENST00000474838 CAGE1Q8TC20 777 aa18.65■□□□□ 0.58
ITGB5-205ENST00000474838 INPP4AQ96PE3 977 aaPredicted RBP18.65■□□□□ 0.58
ITGB5-205ENST00000474838 ZNF576Q9H609 170 aa18.65■□□□□ 0.58
ITGB5-205ENST00000474838 GTF2IRD1Q9UHL9 959 aa18.65■□□□□ 0.58
ITGB5-205ENST00000474838 HAS3O00219 553 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 FOSL2P15408 326 aa18.64■□□□□ 0.57
ITGB5-205ENST00000474838 SP2Q02086 613 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms