RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 FDPSP14324 419 aaKnown RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNF165P49910 485 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 HMGN5P82970 282 aaKnown RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 PPP1R18Q6NYC8 613 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 CPLX2Q6PUV4 134 aaKnown RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 MAMDC4Q6UXC1 1216 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNF710Q8N1W2 664 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 SRBD1Q8N5C6 995 aaKnown RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 NPLOC4Q8TAT6 608 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 SH3TC2Q8TF17 1288 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 SPOCK2Q92563 424 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 MAML3Q96JK9 1138 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 USP28Q96RU2 1077 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 PIGSQ96S52 555 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 MYL10Q9BUA6 226 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 GLT8D2Q9H1C3 349 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 DNAJC25Q9H1X3 360 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 KCNF1Q9H3M0 494 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 TMEM51Q9NW97 253 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 CYP39A1Q9NYL5 469 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 ADD3Q9UEY8 706 aaKnown RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 PCDHA1Q9Y5I3 950 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 DOCK3Q8IZD9 2030 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 CCDC85CA6NKD9 419 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 MSCO60682 206 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 CDKL5O76039 1030 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 KIF20AO95235 890 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 PLEKHA8P1O95397 391 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 IGHA2P01877 340 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 PRR29P0C7W0 189 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 CCL5P13501 91 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 ELNP15502 786 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 AKAP17AQ02040 695 aaKnown RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 GHRHRQ02643 423 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 SNW1Q13573 536 aaKnown RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 USH1GQ495M9 461 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 MUM1L1Q5H9M0 696 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 MAP3K21Q5TCX8 1036 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 NSMFQ6X4W1 530 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 RNF207Q6ZRF8 634 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 RBM43Q6ZSC3 357 aaKnown RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 RAB11FIP4Q86YS3 637 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 DRC7Q8IY82 874 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 CCDC144CPQ8IYA2 1237 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 FAM177A1Q8N128 213 aaPredicted RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 DNERQ8NFT8 737 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 MYRIPQ8NFW9 859 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 CLEC4DQ8WXI8 215 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 TRIB2Q92519 343 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 ERCC4Q92889 916 aaPredicted RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 CUL5Q93034 780 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 TINF2Q9BSI4 451 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 TRIM5Q9C035 493 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 CPVLQ9H3G5 476 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 GOLPH3LQ9H4A5 285 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 HMX1Q9NP08 348 aaPredicted RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 A1CFQ9NQ94 594 aaKnown RBP4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 PYCARDQ9ULZ3 195 aa4.75□□□□□ -1.65
GAPVD1-216ENST00000474637 TCHHQ07283 1943 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 CNTNAP5Q8WYK1 1306 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 A0A087WWV3 80 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 GOLGA6L6A8MZA4 724 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 CYTH3O43739 400 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 PGK2P07205 417 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 PRKAR2AP13861 404 aaKnown RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 RXRAP19793 462 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 PTGS1P23219 599 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 U2AF2P26368 475 aaKnown RBP eCLIP4.74□□□□□ -1.652e-8■■□□□ 14
GAPVD1-216ENST00000474637 ME1P48163 572 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 CACNB2Q08289 660 aaPredicted RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 BAATQ14032 418 aaPredicted RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 CCL14Q16627 93 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 CCDC186Q7Z3E2 898 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 HOMER1Q86YM7 354 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 FAM133AQ8N9E0 248 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 KIAA1524Q8TCG1 905 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 CCDC12Q8WUD4 166 aaPredicted RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNF396Q96N95 335 aaPredicted RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 GTPBP4Q9BZE4 634 aaKnown RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 RNF208Q9H0X6 261 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 GJB4Q9NTQ9 266 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 FLRT1Q9NZU1 646 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 KIF3AQ9Y496 699 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 GCOM1H8Y6P7 765 aaPredicted RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 NFIBO00712 420 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 CPLX1O14810 134 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 PRPF3O43395 683 aaKnown RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 GJB1P08034 283 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 POLR2MP0CAP2 368 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 CYBAP13498 195 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 IFNAR1P17181 557 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 CDK11BP21127 795 aaKnown RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 CALML3P27482 149 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 HSD17B4P51659 736 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 SSRP1Q08945 709 aaKnown RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 SLC35G1Q2M3R5 365 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 MCTP2Q6DN12 878 aa4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 ZNF771Q7L3S4 317 aaPredicted RBP4.74□□□□□ -1.65
GAPVD1-216ENST00000474637 TRIM22Q8IYM9 498 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms