RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 HIC1Q14526 733 aa19.19■□□□□ 0.66
HPS4-210ENST00000473782 CTC1Q2NKJ3 1217 aa19.19■□□□□ 0.66
HPS4-210ENST00000473782 ZNF618Q5T7W0 954 aa19.19■□□□□ 0.66
HPS4-210ENST00000473782 BTNL9Q6UXG8 535 aa19.19■□□□□ 0.66
HPS4-210ENST00000473782 HDAC6Q9UBN7 1215 aa19.19■□□□□ 0.66
HPS4-210ENST00000473782 CTNNA3Q9UI47 895 aa19.19■□□□□ 0.66
HPS4-210ENST00000473782 ZDBF2Q9HCK1 2354 aa19.19■□□□□ 0.66
HPS4-210ENST00000473782 PATL2C9JE40 543 aaKnown RBP19.18■□□□□ 0.66
HPS4-210ENST00000473782 EFCAB14O75071 495 aa19.18■□□□□ 0.66
HPS4-210ENST00000473782 LGR5O75473 907 aa19.18■□□□□ 0.66
HPS4-210ENST00000473782 CALML3P27482 149 aa19.18■□□□□ 0.66
HPS4-210ENST00000473782 RPS6P62753 249 aaKnown RBP19.18■□□□□ 0.66
HPS4-210ENST00000473782 ARHGAP1Q07960 439 aa19.18■□□□□ 0.66
HPS4-210ENST00000473782 SMAD2Q15796 467 aaKnown RBP19.18■□□□□ 0.66
HPS4-210ENST00000473782 TIGD5Q53EQ6 642 aa19.18■□□□□ 0.66
HPS4-210ENST00000473782 BMP8AQ7Z5Y6 402 aa19.18■□□□□ 0.66
HPS4-210ENST00000473782 KBTBD3Q8NAB2 608 aa19.18■□□□□ 0.66
HPS4-210ENST00000473782 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.18■□□□□ 0.66
HPS4-210ENST00000473782 CACNA1HO95180 2353 aa19.17■□□□□ 0.66
HPS4-210ENST00000473782 ZNF200P98182 395 aaPredicted RBP19.17■□□□□ 0.66
HPS4-210ENST00000473782 PDE4DQ08499 809 aa19.17■□□□□ 0.66
HPS4-210ENST00000473782 PTPROQ16827 1216 aa19.17■□□□□ 0.66
HPS4-210ENST00000473782 RNF135Q8IUD6 432 aa19.17■□□□□ 0.66
HPS4-210ENST00000473782 OSBPL7Q9BZF2 842 aa19.17■□□□□ 0.66
HPS4-210ENST00000473782 STX8Q9UNK0 236 aa19.17■□□□□ 0.66
HPS4-210ENST00000473782 SPTBN4Q9H254 2564 aa19.16■□□□□ 0.66
HPS4-210ENST00000473782 RNF113AO15541 343 aaKnown RBP19.16■□□□□ 0.66
HPS4-210ENST00000473782 GPM6BQ13491 265 aa19.16■□□□□ 0.66
HPS4-210ENST00000473782 LY6KQ17RY6 165 aa19.16■□□□□ 0.66
HPS4-210ENST00000473782 RNF207Q6ZRF8 634 aa19.16■□□□□ 0.66
HPS4-210ENST00000473782 DBF4BQ8NFT6 615 aa19.16■□□□□ 0.66
HPS4-210ENST00000473782 EDAQ92838 391 aa19.16■□□□□ 0.66
HPS4-210ENST00000473782 CRBNQ96SW2 442 aa19.16■□□□□ 0.66
HPS4-210ENST00000473782 UPF3BQ9BZI7 483 aaKnown RBP19.16■□□□□ 0.66
HPS4-210ENST00000473782 NSUN3Q9H649 340 aaKnown RBP19.16■□□□□ 0.66
HPS4-210ENST00000473782 CLDND1Q9NY35 253 aa19.16■□□□□ 0.66
HPS4-210ENST00000473782 DCHS1Q96JQ0 3298 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 HAS3O00219 553 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 MBTPS2O43462 519 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 APPP05067 770 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 LINC00271P0C7V0 271 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 GNAT2P19087 354 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 PTPN5P54829 565 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 PDE4BQ07343 736 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 PPARAQ07869 468 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 PTK7Q13308 1070 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 RPAINQ86UA6 219 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 MYOCDQ8IZQ8 938 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 DNERQ8NFT8 737 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 SEC62Q99442 399 aaKnown RBP19.15■□□□□ 0.66
HPS4-210ENST00000473782 FAM50BQ9Y247 325 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 MICAL3Q7RTP6 2002 aa19.15■□□□□ 0.66
HPS4-210ENST00000473782 FOXP2O15409 715 aa19.14■□□□□ 0.65
HPS4-210ENST00000473782 SMARCA5O60264 1052 aaPredicted RBP19.14■□□□□ 0.65
HPS4-210ENST00000473782 SYDE2Q5VT97 1194 aa19.14■□□□□ 0.65
HPS4-210ENST00000473782 EP400NLQ6ZTU2 488 aa19.14■□□□□ 0.65
HPS4-210ENST00000473782 TMEM192Q8IY95 271 aa19.14■□□□□ 0.65
HPS4-210ENST00000473782 SAMD11Q96NU1 681 aa19.14■□□□□ 0.65
HPS4-210ENST00000473782 MTMR7Q9Y216 660 aa19.14■□□□□ 0.65
HPS4-210ENST00000473782 ATG2AQ2TAZ0 1938 aa19.13■□□□□ 0.65
HPS4-210ENST00000473782 PSEN2P49810 448 aa19.13■□□□□ 0.65
HPS4-210ENST00000473782 HYAL1Q12794 435 aa19.13■□□□□ 0.65
HPS4-210ENST00000473782 CLUL1Q15846 466 aa19.13■□□□□ 0.65
HPS4-210ENST00000473782 PLEKHG4Q58EX7 1191 aa19.13■□□□□ 0.65
HPS4-210ENST00000473782 FBXO11Q86XK2 927 aa19.13■□□□□ 0.65
HPS4-210ENST00000473782 DCAF4Q8WV16 495 aa19.13■□□□□ 0.65
HPS4-210ENST00000473782 TOP1MTQ969P6 601 aa19.13■□□□□ 0.65
HPS4-210ENST00000473782 ZBTB40Q9NUA8 1239 aa19.13■□□□□ 0.65
HPS4-210ENST00000473782 COL4A6Q14031 1691 aa19.13■□□□□ 0.65
HPS4-210ENST00000473782 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.12■□□□□ 0.65
HPS4-210ENST00000473782 AMHP03971 560 aa19.12■□□□□ 0.65
HPS4-210ENST00000473782 GTF2F1P35269 517 aaKnown RBP eCLIP19.12■□□□□ 0.65
HPS4-210ENST00000473782 CCDC96Q2M329 555 aa19.12■□□□□ 0.65
HPS4-210ENST00000473782 TRIM67Q6ZTA4 783 aa19.12■□□□□ 0.65
HPS4-210ENST00000473782 TBC1D5Q92609 795 aa19.12■□□□□ 0.65
HPS4-210ENST00000473782 ALG1Q9BT22 464 aa19.12■□□□□ 0.65
HPS4-210ENST00000473782 CACNA1AO00555 2505 aa19.12■□□□□ 0.65
HPS4-210ENST00000473782 FRMPD2Q68DX3 1309 aaPredicted RBP19.11■□□□□ 0.65
HPS4-210ENST00000473782 TMEM221A6NGB7 291 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 M0R296 226 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 HMMRO75330 724 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 TBX10O75333 385 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 F2P00734 622 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 GH1P01241 217 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 CASTP20810 708 aaKnown RBP19.11■□□□□ 0.65
HPS4-210ENST00000473782 TSHZ3Q63HK5 1081 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 C7orf31Q8N865 590 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 ECHDC1Q9NTX5 307 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 FAM86C1Q9NVL1 165 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 COL20A1Q9P218 1284 aa19.11■□□□□ 0.65
HPS4-210ENST00000473782 CTDSPL2Q05D32 466 aa19.1■□□□□ 0.65
HPS4-210ENST00000473782 MFSD10Q14728 455 aa19.1■□□□□ 0.65
HPS4-210ENST00000473782 DGKDQ16760 1214 aa19.1■□□□□ 0.65
HPS4-210ENST00000473782 SEPT14Q6ZU15 432 aa19.1■□□□□ 0.65
HPS4-210ENST00000473782 CHST3Q7LGC8 479 aa19.1■□□□□ 0.65
HPS4-210ENST00000473782 PBXIP1Q96AQ6 731 aa19.1■□□□□ 0.65
HPS4-210ENST00000473782 GPCPD1Q9NPB8 672 aa19.1■□□□□ 0.65
HPS4-210ENST00000473782 DDX41Q9UJV9 622 aaKnown RBP19.1■□□□□ 0.65
HPS4-210ENST00000473782 TSPY2A6NKD2 308 aa19.09■□□□□ 0.65
HPS4-210ENST00000473782 C5orf67F2Z3F1 127 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms