RNA–Protein interactions for RNA: ENST00000473689.5

IMP4-213, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-213ENST00000473689 HOMER1Q86YM7 354 aa23.96■■□□□ 1.43
IMP4-213ENST00000473689 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.96■■□□□ 1.43
IMP4-213ENST00000473689 MAFAQ8NHW3 353 aaPredicted RBP23.96■■□□□ 1.43
IMP4-213ENST00000473689 MTIF3Q9H2K0 278 aaKnown RBP23.96■■□□□ 1.43
IMP4-213ENST00000473689 HOXA13P31271 388 aaPredicted RBP23.95■■□□□ 1.42
IMP4-213ENST00000473689 SESTD1Q86VW0 696 aa23.95■■□□□ 1.42
IMP4-213ENST00000473689 MAP3K14Q99558 947 aa23.95■■□□□ 1.42
IMP4-213ENST00000473689 MTA3Q9BTC8 594 aa23.95■■□□□ 1.42
IMP4-213ENST00000473689 LSG1Q9H089 658 aaKnown RBP23.95■■□□□ 1.42
IMP4-213ENST00000473689 PFKMP08237 780 aa23.94■■□□□ 1.42
IMP4-213ENST00000473689 FOSL2P15408 326 aa23.94■■□□□ 1.42
IMP4-213ENST00000473689 CASTP20810 708 aaKnown RBP23.94■■□□□ 1.42
IMP4-213ENST00000473689 PGM5Q15124 567 aa23.94■■□□□ 1.42
IMP4-213ENST00000473689 CATIPQ7Z7H3 387 aa23.94■■□□□ 1.42
IMP4-213ENST00000473689 CTAGE1Q96RT6 745 aa23.94■■□□□ 1.42
IMP4-213ENST00000473689 LY9Q9HBG7 655 aa23.94■■□□□ 1.42
IMP4-213ENST00000473689 SCN10AQ9Y5Y9 1956 aa23.94■■□□□ 1.42
IMP4-213ENST00000473689 GCOM1H8Y6P7 765 aaPredicted RBP23.93■■□□□ 1.42
IMP4-213ENST00000473689 PITPNM1O00562 1244 aa23.93■■□□□ 1.42
IMP4-213ENST00000473689 POLR2MP0CAP2 368 aa23.93■■□□□ 1.42
IMP4-213ENST00000473689 LAMC2Q13753 1193 aa23.93■■□□□ 1.42
IMP4-213ENST00000473689 DGKDQ16760 1214 aa23.93■■□□□ 1.42
IMP4-213ENST00000473689 MRVI1Q9Y6F6 885 aa23.93■■□□□ 1.42
IMP4-213ENST00000473689 CDH23Q9H251 3354 aa23.92■■□□□ 1.42
IMP4-213ENST00000473689 IQCF3P0C7M6 154 aa23.92■■□□□ 1.42
IMP4-213ENST00000473689 MYCLP12524 364 aaPredicted RBP23.92■■□□□ 1.42
IMP4-213ENST00000473689 COL9A3Q14050 684 aaPredicted RBP23.92■■□□□ 1.42
IMP4-213ENST00000473689 RAB30Q15771 203 aa23.92■■□□□ 1.42
IMP4-213ENST00000473689 KCNV1Q6PIU1 500 aa23.92■■□□□ 1.42
IMP4-213ENST00000473689 IL31RAQ8NI17 732 aa23.92■■□□□ 1.42
IMP4-213ENST00000473689 PPTC7Q8NI37 304 aa23.92■■□□□ 1.42
IMP4-213ENST00000473689 ESYT1Q9BSJ8 1104 aa23.92■■□□□ 1.42
IMP4-213ENST00000473689 HOXD8P13378 290 aaPredicted RBP23.91■■□□□ 1.42
IMP4-213ENST00000473689 SMARCA1P28370 1054 aa23.91■■□□□ 1.42
IMP4-213ENST00000473689 RFC2P35250 354 aa23.91■■□□□ 1.42
IMP4-213ENST00000473689 NECTIN1Q15223 517 aa23.91■■□□□ 1.42
IMP4-213ENST00000473689 PTGISQ16647 500 aa23.91■■□□□ 1.42
IMP4-213ENST00000473689 MYSM1Q5VVJ2 828 aa23.91■■□□□ 1.42
IMP4-213ENST00000473689 GDF6Q6KF10 455 aaPredicted RBP23.91■■□□□ 1.42
IMP4-213ENST00000473689 DHX37Q8IY37 1157 aaKnown RBP23.91■■□□□ 1.42
IMP4-213ENST00000473689 ZNF654Q8IZM8 581 aa23.91■■□□□ 1.42
IMP4-213ENST00000473689 MSRAQ9UJ68 235 aa23.91■■□□□ 1.42
IMP4-213ENST00000473689 YBX2Q9Y2T7 364 aaKnown RBP23.91■■□□□ 1.42
IMP4-213ENST00000473689 SLC4A7Q9Y6M7 1214 aa23.91■■□□□ 1.42
IMP4-213ENST00000473689 HAS3O00219 553 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 SLC27A2O14975 620 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 PRC1O43663 620 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 DDAH1O94760 285 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 TGFB3P10600 412 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 SP2Q02086 613 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 BFSP2Q13515 415 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 CELF3Q5SZQ8 465 aaKnown RBP23.9■■□□□ 1.42
IMP4-213ENST00000473689 DEFB128Q7Z7B8 93 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 TMTC2Q8N394 836 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 RETREG2Q8NC44 543 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 SPZ1Q9BXG8 430 aa23.9■■□□□ 1.42
IMP4-213ENST00000473689 PPFIA4O75335 1185 aa23.89■■□□□ 1.41
IMP4-213ENST00000473689 CHMP4BP1P59074 171 aa23.89■■□□□ 1.41
IMP4-213ENST00000473689 FCHSD1Q86WN1 690 aa23.89■■□□□ 1.41
IMP4-213ENST00000473689 TMEM87BQ96K49 555 aa23.89■■□□□ 1.41
IMP4-213ENST00000473689 MYL10Q9BUA6 226 aa23.89■■□□□ 1.41
IMP4-213ENST00000473689 GTF2IRD1Q9UHL9 959 aa23.89■■□□□ 1.41
IMP4-213ENST00000473689 NOD1Q9Y239 953 aa23.89■■□□□ 1.41
IMP4-213ENST00000473689 SH2B2O14492 632 aaPredicted RBP23.88■■□□□ 1.41
IMP4-213ENST00000473689 F2P00734 622 aa23.88■■□□□ 1.41
IMP4-213ENST00000473689 CCND2P30279 289 aa23.88■■□□□ 1.41
IMP4-213ENST00000473689 MCM5P33992 734 aa23.88■■□□□ 1.41
IMP4-213ENST00000473689 PSEN2P49810 448 aa23.88■■□□□ 1.41
IMP4-213ENST00000473689 HSDL1Q3SXM5 330 aa23.88■■□□□ 1.41
IMP4-213ENST00000473689 CASC1Q6TDU7 716 aa23.88■■□□□ 1.41
IMP4-213ENST00000473689 ZFP91Q96JP5 570 aaPredicted RBP23.88■■□□□ 1.41
IMP4-213ENST00000473689 NKX2-4Q9H2Z4 354 aa23.88■■□□□ 1.41
IMP4-213ENST00000473689 HDAC6Q9UBN7 1215 aa23.88■■□□□ 1.41
IMP4-213ENST00000473689 UNC80Q8N2C7 3258 aa23.88■■□□□ 1.41
IMP4-213ENST00000473689 FRMPD4Q14CM0 1322 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 KIF5BP33176 963 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 LIFRP42702 1097 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 RABGGTBP53611 331 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 MRPS9P82933 396 aaKnown RBP23.87■■□□□ 1.41
IMP4-213ENST00000473689 RBL2Q08999 1139 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 GPNMBQ14956 572 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 BMP2KLQ5H9B9 411 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 CREB3L3Q68CJ9 461 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 CTCFLQ8NI51 663 aaPredicted RBP23.87■■□□□ 1.41
IMP4-213ENST00000473689 CAGE1Q8TC20 777 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 PIBF1Q8WXW3 757 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 DHX38Q92620 1227 aaKnown RBP23.87■■□□□ 1.41
IMP4-213ENST00000473689 GPKOWQ92917 476 aaPredicted RBP eCLIP23.87■■□□□ 1.41
IMP4-213ENST00000473689 LZTS2Q9BRK4 669 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 PRDM12Q9H4Q4 367 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 SLC28A3Q9HAS3 691 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 PCDHA11Q9Y5I1 949 aa23.87■■□□□ 1.41
IMP4-213ENST00000473689 ZBBXA8MT70 800 aa23.86■■□□□ 1.41
IMP4-213ENST00000473689 GGPS1O95749 300 aa23.86■■□□□ 1.41
IMP4-213ENST00000473689 ATP2A2P16615 1042 aaKnown RBP23.86■■□□□ 1.41
IMP4-213ENST00000473689 UBA1P22314 1058 aaKnown RBP23.86■■□□□ 1.41
IMP4-213ENST00000473689 MFSD10Q14728 455 aa23.86■■□□□ 1.41
IMP4-213ENST00000473689 KIAA0753Q2KHM9 967 aa23.86■■□□□ 1.41
IMP4-213ENST00000473689 SRBD1Q8N5C6 995 aaKnown RBP23.86■■□□□ 1.41
IMP4-213ENST00000473689 C7orf31Q8N865 590 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms