RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 EIF4A3P38919 411 aaKnown RBP23.43■■□□□ 1.34
COL18A1-207ENST00000473212 MATR3P43243 847 aaKnown RBP eCLIP23.43■■□□□ 1.34
COL18A1-207ENST00000473212 KIF11P52732 1056 aa23.43■■□□□ 1.34
COL18A1-207ENST00000473212 AMPD3Q01432 767 aa23.43■■□□□ 1.34
COL18A1-207ENST00000473212 ECM1Q16610 540 aa23.43■■□□□ 1.34
COL18A1-207ENST00000473212 NEDD1Q8NHV4 660 aa23.43■■□□□ 1.34
COL18A1-207ENST00000473212 SEC63Q9UGP8 760 aaKnown RBP23.43■■□□□ 1.34
COL18A1-207ENST00000473212 DMGDHQ9UI17 866 aaKnown RBP23.43■■□□□ 1.34
COL18A1-207ENST00000473212 FAM184BQ9ULE4 1060 aa23.43■■□□□ 1.34
COL18A1-207ENST00000473212 COL24A1Q17RW2 1714 aa23.43■■□□□ 1.34
COL18A1-207ENST00000473212 PPFIA4O75335 1185 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 VWA3BQ502W6 1294 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 SOGA3Q5TF21 947 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 MMGT1Q8N4V1 131 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 DEF6Q9H4E7 631 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 MMRN2Q9H8L6 949 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 KANSL2Q9H9L4 492 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 CD209Q9NNX6 404 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 SIK3Q9Y2K2 1263 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 UFL1O94874 794 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 PPP1R2P41236 205 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 UBE2SQ16763 222 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 NFRKBQ6P4R8 1299 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 SND1Q7KZF4 910 aaKnown RBP eCLIP23.42■■□□□ 1.344e-14■□□□□ 9.9
COL18A1-207ENST00000473212 NDST4Q9H3R1 872 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 SALL4Q9UJQ4 1053 aa23.42■■□□□ 1.34
COL18A1-207ENST00000473212 GNA11P29992 359 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 HNRNPH3P31942 346 aaKnown RBP23.41■■□□□ 1.34
COL18A1-207ENST00000473212 RHBDL3P58872 404 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 APBA1Q02410 837 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 CENPPQ6IPU0 288 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 MTMR9Q96QG7 549 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 GSTO1P78417 241 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 SLC7A5Q01650 507 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 PICALMQ13492 652 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 CALCRLQ16602 461 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 ZNF804AQ7Z570 1209 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 SPATA4Q8NEY3 305 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 FAM76AQ8TAV0 307 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 CALML4Q96GE6 196 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 OSBPL9Q96SU4 736 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 GPCPD1Q9NPB8 672 aa23.41■■□□□ 1.34
COL18A1-207ENST00000473212 AKR1B10O60218 316 aa23.4■■□□□ 1.34
COL18A1-207ENST00000473212 SV2BQ7L1I2 683 aa23.4■■□□□ 1.34
COL18A1-207ENST00000473212 FGFBP2Q9BYJ0 223 aa23.4■■□□□ 1.34
COL18A1-207ENST00000473212 LEMD3Q9Y2U8 911 aa23.4■■□□□ 1.34
COL18A1-207ENST00000473212 GOLGA6CA6NDK9 693 aa23.4■■□□□ 1.34
COL18A1-207ENST00000473212 NCK2O43639 380 aa23.4■■□□□ 1.34
COL18A1-207ENST00000473212 GOLGA6DP0CG33 693 aa23.4■■□□□ 1.34
COL18A1-207ENST00000473212 PDHBP11177 359 aa23.4■■□□□ 1.34
COL18A1-207ENST00000473212 RRAGAQ7L523 313 aa23.4■■□□□ 1.34
COL18A1-207ENST00000473212 GOLGA6AQ9NYA3 693 aa23.4■■□□□ 1.34
COL18A1-207ENST00000473212 LRRC53A6NM62 1247 aa23.39■■□□□ 1.34
COL18A1-207ENST00000473212 MFSD14BQ5SR56 506 aa23.39■■□□□ 1.34
COL18A1-207ENST00000473212 TMC4Q7Z404 712 aa23.39■■□□□ 1.34
COL18A1-207ENST00000473212 LARP4BQ92615 738 aaKnown RBP23.39■■□□□ 1.34
COL18A1-207ENST00000473212 LZTS2Q9BRK4 669 aa23.39■■□□□ 1.34
COL18A1-207ENST00000473212 GPR75-ASB3A0A0A6YYF3 556 aa23.39■■□□□ 1.33
COL18A1-207ENST00000473212 COBLL1Q53SF7 1204 aa23.39■■□□□ 1.33
COL18A1-207ENST00000473212 IQCDQ96DY2 449 aa23.39■■□□□ 1.33
COL18A1-207ENST00000473212 TBC1D7Q9P0N9 293 aa23.39■■□□□ 1.33
COL18A1-207ENST00000473212 TNNI2P48788 182 aa23.38■■□□□ 1.33
COL18A1-207ENST00000473212 ZNF572Q7Z3I7 529 aaPredicted RBP23.38■■□□□ 1.33
COL18A1-207ENST00000473212 C8orf37Q96NL8 207 aa23.38■■□□□ 1.33
COL18A1-207ENST00000473212 F8W031 263 aaPredicted RBP23.38■■□□□ 1.33
COL18A1-207ENST00000473212 RFC4P35249 363 aa23.38■■□□□ 1.33
COL18A1-207ENST00000473212 MAGEA9P43362 315 aa23.38■■□□□ 1.33
COL18A1-207ENST00000473212 RC3H1Q5TC82 1133 aaKnown RBP23.38■■□□□ 1.33
COL18A1-207ENST00000473212 TTBK2Q6IQ55 1244 aa23.38■■□□□ 1.33
COL18A1-207ENST00000473212 CNBD1Q8NA66 436 aa23.38■■□□□ 1.33
COL18A1-207ENST00000473212 HYOU1Q9Y4L1 999 aa23.38■■□□□ 1.33
COL18A1-207ENST00000473212 PPP1R11O60927 126 aaPredicted RBP23.37■■□□□ 1.33
COL18A1-207ENST00000473212 LCA5LO95447 670 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 LDHCP07864 332 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 PRLRP16471 622 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 CORO7P57737 925 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 CACNB1Q02641 598 aaPredicted RBP23.37■■□□□ 1.33
COL18A1-207ENST00000473212 MAN2A1Q16706 1144 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 SNX29Q8TEQ0 813 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 DDX12PQ92771 950 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 ALS2CR12Q96Q35 445 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 SHOX2O60902 331 aaPredicted RBP23.37■■□□□ 1.33
COL18A1-207ENST00000473212 AKR1B1P15121 316 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 MAGEA1P43355 309 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 GFPT1Q06210 699 aaPredicted RBP23.37■■□□□ 1.33
COL18A1-207ENST00000473212 CCDC181Q5TID7 509 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 LRRC55Q6ZSA7 311 aa23.37■■□□□ 1.33
COL18A1-207ENST00000473212 SLC16A2P36021 539 aa23.36■■□□□ 1.33
COL18A1-207ENST00000473212 ITIH3Q06033 890 aa23.36■■□□□ 1.33
COL18A1-207ENST00000473212 UNC13DQ70J99 1090 aa23.36■■□□□ 1.33
COL18A1-207ENST00000473212 CDK5RAP3Q96JB5 506 aa23.36■■□□□ 1.33
COL18A1-207ENST00000473212 RIOX1Q9H6W3 641 aa23.36■■□□□ 1.33
COL18A1-207ENST00000473212 NLRC4Q9NPP4 1024 aa23.36■■□□□ 1.33
COL18A1-207ENST00000473212 TCP1P17987 556 aaKnown RBP23.36■■□□□ 1.33
COL18A1-207ENST00000473212 NT5C2P49902 561 aa23.36■■□□□ 1.33
COL18A1-207ENST00000473212 LTBP4Q8N2S1 1624 aa23.36■■□□□ 1.33
COL18A1-207ENST00000473212 DNAJC21Q5F1R6 531 aaKnown RBP23.35■■□□□ 1.33
COL18A1-207ENST00000473212 CCDC84Q86UT8 332 aaPredicted RBP23.35■■□□□ 1.33
COL18A1-207ENST00000473212 BAP1Q92560 729 aa23.35■■□□□ 1.33
COL18A1-207ENST00000473212 BUB1O43683 1085 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms