RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 SH3GLB2Q9NR46 395 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 PXMP2Q9NR77 195 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 FAM184BQ9ULE4 1060 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 MCM3APO60318 1980 aa12.07□□□□□ -0.48
SMARCD3-208ENST00000472789 MEIS2O14770 477 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 MSCO60682 206 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 SGPL1O95470 568 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 F13A1P00488 732 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 IGHA2P01877 340 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 NR3C2P08235 984 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 ZNF865P0CJ78 1059 aaPredicted RBP12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 RARBP10826 455 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 AKR1A1P14550 325 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 GJA8P48165 433 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 NLRP5P59047 1200 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 GHRHRQ02643 423 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 STXBP2Q15833 593 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 CCDC144BQ3MJ40 725 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 MCTP1Q6DN14 999 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 SEPT14Q6ZU15 432 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 TNPO1Q92973 898 aaKnown RBP12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 LENG1Q96BZ8 264 aaPredicted RBP12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 AIFM3Q96NN9 605 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 IWS1Q96ST2 819 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 GLT8D2Q9H1C3 349 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 EHMT1Q9H9B1 1298 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 VTA1Q9NP79 307 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 RIC8AQ9NPQ8 531 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 PDGFCQ9NRA1 345 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 MTMR6Q9Y217 621 aa12.06□□□□□ -0.48
SMARCD3-208ENST00000472789 LOC102724159A0A0B4J2E5 919 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 PIK3CDO00329 1044 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 GNA11P29992 359 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 CCND2P30279 289 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 ADCYAP1R1P41586 468 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 TNFAIP2Q03169 654 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 PGM5Q15124 567 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 PWP2Q15269 919 aaKnown RBP12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 JAKMIP3Q5VZ66 844 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 ATL3Q6DD88 541 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 GALNT17Q6IS24 598 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 MORC4Q8TE76 937 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 PGBD1Q96JS3 809 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 PDCD2LQ9BRP1 358 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 TMEM260Q9NX78 707 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 PCDHA6Q9UN73 950 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 PCDHA8Q9Y5H6 950 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 LCTP09848 1927 aa12.05□□□□□ -0.48
SMARCD3-208ENST00000472789 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 ESYT2A0FGR8 921 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 PGK1P00558 417 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 EDNRBP24530 442 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 KRT40Q6A162 431 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 CHRDL2Q6WN34 429 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 CLEC17AQ6ZS10 378 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 BRAPQ7Z569 592 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 REXO1Q8N1G1 1221 aaKnown RBP12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 IL31RAQ8NI17 732 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 BICD2Q8TD16 824 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 RASGRP4Q8TDF6 673 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 SHISA4Q96DD7 197 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 ANO3Q9BYT9 981 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 WDR11Q9BZH6 1224 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 ZMYND12Q9H0C1 365 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 XPNPEP3Q9NQH7 507 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 RTEL1Q9NZ71 1219 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 CFAP45Q9UL16 551 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 KCNJ14Q9UNX9 436 aa12.04□□□□□ -0.48
SMARCD3-208ENST00000472789 DDX11L8A8MPP1 907 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 EIF3JO75822 258 aaKnown RBP12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 FARP2O94887 1054 aaPredicted RBP12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 FOSP01100 380 aaPredicted RBP12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 TXNP10599 105 aaKnown RBP12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 AP3B2Q13367 1082 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 PKP1Q13835 747 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 GJC2Q5T442 439 aaPredicted RBP12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 FOXD4L5Q5VV16 416 aaPredicted RBP12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 LHX8Q68G74 356 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 IQSEC1Q6DN90 963 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 TAPT1Q6NXT6 567 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 VSIG10LQ86VR7 867 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 ARRDC4Q8NCT1 418 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 SCFD2Q8WU76 684 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 FOXD4L4Q8WXT5 416 aaPredicted RBP12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 ZNF396Q96N95 335 aaPredicted RBP12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 KATNBL1Q9H079 304 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 CRISPLD2Q9H0B8 497 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 AP5M1Q9H0R1 490 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 FOXP1Q9H334 677 aaPredicted RBP12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 SPC25Q9HBM1 224 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 ZDHHC9Q9Y397 364 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 MRVI1Q9Y6F6 885 aa12.03□□□□□ -0.48
SMARCD3-208ENST00000472789 KBTBD13C9JR72 458 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 DYNC1LI2O43237 492 aaPredicted RBP12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 SORBS3O60504 671 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 DUSP11O75319 330 aaKnown RBP12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 MMP1P03956 469 aa12.02□□□□□ -0.49
SMARCD3-208ENST00000472789 C6orf222P0C671 652 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms