RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 NSUN6Q8TEA1 469 aaKnown RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 DIS3LQ8TF46 1054 aaKnown RBP3.32□□□□□ -1.88
XRN1-210ENST00000472697 GJA10Q969M2 543 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 ISL2Q96A47 359 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 SGCZQ96LD1 299 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 FANCD2OSQ96PS1 177 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 MDFIQ99750 246 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 PAGR1Q9BTK6 254 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 JAM3Q9BX67 310 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 EPN3Q9H201 632 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 KLHL11Q9NVR0 708 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 SRPK3Q9UPE1 567 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 CORO2BQ9UQ03 480 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 SHROOM2Q13796 1616 aa3.32□□□□□ -1.88
XRN1-210ENST00000472697 SPDYE3A6NKU9 549 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 PDE6AP16499 860 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 GEMIN4P57678 1058 aaKnown RBP3.31□□□□□ -1.88
XRN1-210ENST00000472697 STYK1Q6J9G0 422 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 ZPBP2Q6X784 338 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 CCDC149Q6ZUS6 474 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 OSTM1Q86WC4 334 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 PPIL6Q8IXY8 311 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 AMOTL1Q8IY63 956 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 PSMG3-AS1Q96PY0 264 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 NELL2Q99435 816 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 UNKQ9C0B0 810 aaKnown RBP3.31□□□□□ -1.88
XRN1-210ENST00000472697 IPPKQ9H8X2 491 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 PRDM11Q9NQV5 511 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 MAN1C1Q9NR34 630 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 SMC4Q9NTJ3 1288 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 RRN3Q9NYV6 651 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 GPRC5BQ9NZH0 403 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 CLEC1BQ9P126 229 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 FBLN5Q9UBX5 448 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 HDAC9Q9UKV0 1011 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 AP4E1Q9UPM8 1137 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 PTPN22Q9Y2R2 807 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 SLC12A7Q9Y666 1083 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 GAPVD1Q14C86 1478 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 PRR33A8MZF0 331 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 C11orf95C9JLR9 678 aaPredicted RBP3.31□□□□□ -1.88
XRN1-210ENST00000472697 DDX3XO00571 662 aaKnown RBP eCLIP3.31□□□□□ -1.88
XRN1-210ENST00000472697 MECP2P51608 486 aaKnown RBP3.31□□□□□ -1.88
XRN1-210ENST00000472697 C19orf57Q0VDD7 668 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 MAP7Q14244 749 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 GAS6Q14393 721 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 NOL9Q5SY16 702 aaKnown RBP3.31□□□□□ -1.88
XRN1-210ENST00000472697 KLHDC7AQ5VTJ3 777 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 CXorf57Q6NSI4 855 aaKnown RBP3.31□□□□□ -1.88
XRN1-210ENST00000472697 ESRP1Q6NXG1 681 aaKnown RBP3.31□□□□□ -1.88
XRN1-210ENST00000472697 C16orf54Q6UWD8 224 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 TOGARAM2Q6ZUX3 1019 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 PTRH1Q86Y79 214 aaKnown RBP3.31□□□□□ -1.88
XRN1-210ENST00000472697 CPXCR1Q8N123 301 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 GPATCH11Q8N954 259 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 ENOX1Q8TC92 643 aaKnown RBP3.31□□□□□ -1.88
XRN1-210ENST00000472697 SLC5A5Q92911 643 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 RILPL2Q969X0 211 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 TMEM169Q96HH4 297 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 ELF4Q99607 663 aaPredicted RBP3.31□□□□□ -1.88
XRN1-210ENST00000472697 ZNF700Q9H0M5 742 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 ZHX3Q9H4I2 956 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 PICK1Q9NRD5 415 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 ANKRD6Q9Y2G4 727 aa3.31□□□□□ -1.88
XRN1-210ENST00000472697 ABCC10Q5T3U5 1492 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 CCDC66A2RUB6 948 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 RNASEH2AO75792 299 aaKnown RBP3.3□□□□□ -1.88
XRN1-210ENST00000472697 TBC1D8O95759 1140 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 IGHA1P01876 353 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 KRT15P19012 456 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 ITGA6P23229 1130 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 RECQLP46063 649 aaPredicted RBP3.3□□□□□ -1.88
XRN1-210ENST00000472697 JAM2P57087 298 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 POU5F1BQ06416 359 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 PDE4BQ07343 736 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 KIAA0753Q2KHM9 967 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 KIF4BQ2VIQ3 1234 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 CCDC93Q567U6 631 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 GPR158Q5T848 1215 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 UNQ6494/PRO21346Q6UXR6 183 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 OVCH1Q7RTY7 1134 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 CNPY4Q8N129 248 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 CACTIN-AS1Q8N1I8 211 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 AGGF1Q8N302 714 aaeCLIP3.3□□□□□ -1.88
XRN1-210ENST00000472697 C1orf131Q8NDD1 294 aaKnown RBP3.3□□□□□ -1.88
XRN1-210ENST00000472697 RCBTB1Q8NDN9 531 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 PLBD2Q8NHP8 589 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 LMBR1Q8WVP7 490 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 RTF1Q92541 710 aaKnown RBP3.3□□□□□ -1.88
XRN1-210ENST00000472697 B3GNT5Q9BYG0 378 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 ANO3Q9BYT9 981 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 CDIP1Q9H305 208 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 SENP2Q9HC62 589 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 ATP13A2Q9NQ11 1180 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 WHRNQ9P202 907 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 LIMCH1Q9UPQ0 1083 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 APOBEC2Q9Y235 224 aaKnown RBP3.3□□□□□ -1.88
XRN1-210ENST00000472697 INVSQ9Y283 1065 aa3.3□□□□□ -1.88
XRN1-210ENST00000472697 PCDHA2Q9Y5H9 948 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms