RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 CATIPQ7Z7H3 387 aa26.16■■□□□ 1.78
C9orf3-213ENST00000471978 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.16■■□□□ 1.78
C9orf3-213ENST00000471978 SAMD3Q8N6K7 520 aa26.16■■□□□ 1.78
C9orf3-213ENST00000471978 DDX41Q9UJV9 622 aaKnown RBP26.16■■□□□ 1.78
C9orf3-213ENST00000471978 HOXA13P31271 388 aaPredicted RBP26.15■■□□□ 1.78
C9orf3-213ENST00000471978 ANTXR2P58335 489 aa26.15■■□□□ 1.78
C9orf3-213ENST00000471978 MB21D2Q8IYB1 491 aaPredicted RBP26.15■■□□□ 1.78
C9orf3-213ENST00000471978 IGDCC4Q8TDY8 1250 aa26.15■■□□□ 1.78
C9orf3-213ENST00000471978 MRVI1Q9Y6F6 885 aa26.15■■□□□ 1.78
C9orf3-213ENST00000471978 KIAA1217Q5T5P2 1943 aa26.15■■□□□ 1.78
C9orf3-213ENST00000471978 CYTH3O43739 400 aa26.14■■□□□ 1.78
C9orf3-213ENST00000471978 MYCLP12524 364 aaPredicted RBP26.14■■□□□ 1.78
C9orf3-213ENST00000471978 VWCEQ96DN2 955 aa26.14■■□□□ 1.78
C9orf3-213ENST00000471978 PDCD2LQ9BRP1 358 aa26.14■■□□□ 1.78
C9orf3-213ENST00000471978 MSRAQ9UJ68 235 aa26.14■■□□□ 1.78
C9orf3-213ENST00000471978 NOD1Q9Y239 953 aa26.14■■□□□ 1.78
C9orf3-213ENST00000471978 PNMA6FA0A0J9YX94 578 aa26.13■■□□□ 1.77
C9orf3-213ENST00000471978 GCOM1H8Y6P7 765 aaPredicted RBP26.13■■□□□ 1.77
C9orf3-213ENST00000471978 POLR2MP0CAP2 368 aa26.13■■□□□ 1.77
C9orf3-213ENST00000471978 CASTP20810 708 aaKnown RBP26.13■■□□□ 1.77
C9orf3-213ENST00000471978 RAB30Q15771 203 aa26.13■■□□□ 1.77
C9orf3-213ENST00000471978 PFKMP08237 780 aa26.12■■□□□ 1.77
C9orf3-213ENST00000471978 DGKDQ16760 1214 aa26.12■■□□□ 1.77
C9orf3-213ENST00000471978 DEFB128Q7Z7B8 93 aa26.12■■□□□ 1.77
C9orf3-213ENST00000471978 VSIG10LQ86VR7 867 aa26.12■■□□□ 1.77
C9orf3-213ENST00000471978 RETREG2Q8NC44 543 aa26.12■■□□□ 1.77
C9orf3-213ENST00000471978 EMID1Q96A84 441 aaPredicted RBP26.12■■□□□ 1.77
C9orf3-213ENST00000471978 SLC4A7Q9Y6M7 1214 aa26.12■■□□□ 1.77
C9orf3-213ENST00000471978 BAZ2BQ9UIF8 2168 aaKnown RBP26.12■■□□□ 1.77
C9orf3-213ENST00000471978 ZBBXA8MT70 800 aa26.11■■□□□ 1.77
C9orf3-213ENST00000471978 PITPNM1O00562 1244 aa26.11■■□□□ 1.77
C9orf3-213ENST00000471978 LAMC2Q13753 1193 aa26.11■■□□□ 1.77
C9orf3-213ENST00000471978 PGM5Q15124 567 aa26.11■■□□□ 1.77
C9orf3-213ENST00000471978 DHX37Q8IY37 1157 aaKnown RBP26.11■■□□□ 1.77
C9orf3-213ENST00000471978 KAT2BQ92831 832 aa26.11■■□□□ 1.77
C9orf3-213ENST00000471978 LSG1Q9H089 658 aaKnown RBP26.11■■□□□ 1.77
C9orf3-213ENST00000471978 RGS20O76081 388 aa26.1■■□□□ 1.77
C9orf3-213ENST00000471978 BFSP2Q13515 415 aa26.1■■□□□ 1.77
C9orf3-213ENST00000471978 PTGISQ16647 500 aa26.1■■□□□ 1.77
C9orf3-213ENST00000471978 KCNV1Q6PIU1 500 aa26.1■■□□□ 1.77
C9orf3-213ENST00000471978 CASC1Q6TDU7 716 aa26.1■■□□□ 1.77
C9orf3-213ENST00000471978 FCHSD1Q86WN1 690 aa26.1■■□□□ 1.77
C9orf3-213ENST00000471978 IL31RAQ8NI17 732 aa26.1■■□□□ 1.77
C9orf3-213ENST00000471978 PIBF1Q8WXW3 757 aa26.1■■□□□ 1.77
C9orf3-213ENST00000471978 LY9Q9HBG7 655 aa26.1■■□□□ 1.77
C9orf3-213ENST00000471978 PRC1O43663 620 aa26.09■■□□□ 1.77
C9orf3-213ENST00000471978 IQCF3P0C7M6 154 aa26.09■■□□□ 1.77
C9orf3-213ENST00000471978 RFC2P35250 354 aa26.09■■□□□ 1.77
C9orf3-213ENST00000471978 SESTD1Q86VW0 696 aa26.09■■□□□ 1.77
C9orf3-213ENST00000471978 ZNF654Q8IZM8 581 aa26.09■■□□□ 1.77
C9orf3-213ENST00000471978 PPTC7Q8NI37 304 aa26.09■■□□□ 1.77
C9orf3-213ENST00000471978 CTCFLQ8NI51 663 aaPredicted RBP26.09■■□□□ 1.77
C9orf3-213ENST00000471978 MAP3K14Q99558 947 aa26.09■■□□□ 1.77
C9orf3-213ENST00000471978 ESYT1Q9BSJ8 1104 aa26.09■■□□□ 1.77
C9orf3-213ENST00000471978 MYL10Q9BUA6 226 aa26.09■■□□□ 1.77
C9orf3-213ENST00000471978 VCANP13611 3396 aa26.09■■□□□ 1.77
C9orf3-213ENST00000471978 DDAH1O94760 285 aa26.08■■□□□ 1.77
C9orf3-213ENST00000471978 CCND2P30279 289 aa26.08■■□□□ 1.77
C9orf3-213ENST00000471978 GDF6Q6KF10 455 aaPredicted RBP26.08■■□□□ 1.77
C9orf3-213ENST00000471978 MTA3Q9BTC8 594 aa26.08■■□□□ 1.77
C9orf3-213ENST00000471978 NKX2-4Q9H2Z4 354 aa26.08■■□□□ 1.77
C9orf3-213ENST00000471978 YBX2Q9Y2T7 364 aaKnown RBP26.08■■□□□ 1.77
C9orf3-213ENST00000471978 CHD7Q9P2D1 2997 aa26.08■■□□□ 1.77
C9orf3-213ENST00000471978 SORBS3O60504 671 aa26.07■■□□□ 1.76
C9orf3-213ENST00000471978 KIF5BP33176 963 aa26.07■■□□□ 1.76
C9orf3-213ENST00000471978 MCM5P33992 734 aa26.07■■□□□ 1.76
C9orf3-213ENST00000471978 RABGGTBP53611 331 aa26.07■■□□□ 1.76
C9orf3-213ENST00000471978 CCDC155Q8N6L0 562 aa26.07■■□□□ 1.76
C9orf3-213ENST00000471978 C7orf31Q8N865 590 aa26.07■■□□□ 1.76
C9orf3-213ENST00000471978 ZFP91Q96JP5 570 aaPredicted RBP26.07■■□□□ 1.76
C9orf3-213ENST00000471978 KATNAL1Q9BW62 490 aa26.07■■□□□ 1.76
C9orf3-213ENST00000471978 PRDM12Q9H4Q4 367 aa26.07■■□□□ 1.76
C9orf3-213ENST00000471978 SLC28A3Q9HAS3 691 aa26.07■■□□□ 1.76
C9orf3-213ENST00000471978 SCN5AQ14524 2016 aa26.06■■□□□ 1.76
C9orf3-213ENST00000471978 SLC27A2O14975 620 aa26.06■■□□□ 1.76
C9orf3-213ENST00000471978 ZNF286BP0CG31 522 aa26.06■■□□□ 1.76
C9orf3-213ENST00000471978 ACTN1P12814 892 aa26.06■■□□□ 1.76
C9orf3-213ENST00000471978 ATP2A2P16615 1042 aaKnown RBP26.06■■□□□ 1.76
C9orf3-213ENST00000471978 PSEN2P49810 448 aa26.06■■□□□ 1.76
C9orf3-213ENST00000471978 CELF3Q5SZQ8 465 aaKnown RBP26.06■■□□□ 1.76
C9orf3-213ENST00000471978 MYSM1Q5VVJ2 828 aa26.06■■□□□ 1.76
C9orf3-213ENST00000471978 NFXL1Q6ZNB6 911 aa26.06■■□□□ 1.76
C9orf3-213ENST00000471978 RRP36Q96EU6 259 aaKnown RBP26.06■■□□□ 1.76
C9orf3-213ENST00000471978 GAS2L1Q99501 681 aaPredicted RBP26.06■■□□□ 1.76
C9orf3-213ENST00000471978 ALG1Q9BT22 464 aa26.06■■□□□ 1.76
C9orf3-213ENST00000471978 SPZ1Q9BXG8 430 aa26.06■■□□□ 1.76
C9orf3-213ENST00000471978 FTOQ9C0B1 505 aaKnown RBP eCLIP26.06■■□□□ 1.76
C9orf3-213ENST00000471978 SH2B2O14492 632 aaPredicted RBP26.05■■□□□ 1.76
C9orf3-213ENST00000471978 GGPS1O95749 300 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 F2P00734 622 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 TGFB3P10600 412 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 SP2Q02086 613 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 MFSD10Q14728 455 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 TMTC2Q8N394 836 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 CAGE1Q8TC20 777 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 TMEM87BQ96K49 555 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 SPATA33Q96N06 139 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 CTAGE1Q96RT6 745 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 LZTS2Q9BRK4 669 aa26.05■■□□□ 1.76
C9orf3-213ENST00000471978 ANO2Q9NQ90 1003 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms