RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 EMID1Q96A84 441 aaPredicted RBP17.2■□□□□ 0.34
SDCCAG3-209ENST00000468963 MTIF3Q9H2K0 278 aaKnown RBP17.2■□□□□ 0.34
SDCCAG3-209ENST00000468963 KIAA1217Q5T5P2 1943 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 RGS20O76081 388 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 ANTXR2P58335 489 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 WTAPQ15007 396 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 RAB30Q15771 203 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 VSIG10LQ86VR7 867 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 SESTD1Q86VW0 696 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 CTAGE1Q96RT6 745 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 PIGSQ96S52 555 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 PDCD2LQ9BRP1 358 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 COL25A1Q9BXS0 654 aaPredicted RBP17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 MSRAQ9UJ68 235 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 TTC28Q96AY4 2481 aa17.19■□□□□ 0.34
SDCCAG3-209ENST00000468963 SPTBN5Q9NRC6 3674 aaKnown RBP17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 ERICH2A1L162 156 aa17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 PFKMP08237 780 aa17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 IQCF3P0C7M6 154 aa17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 CASTP20810 708 aaKnown RBP17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 LAMC2Q13753 1193 aa17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 RALYLQ86SE5 291 aaKnown RBP17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 MB21D2Q8IYB1 491 aaPredicted RBP17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 YBX2Q9Y2T7 364 aaKnown RBP17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 SLC4A7Q9Y6M7 1214 aa17.18■□□□□ 0.34
SDCCAG3-209ENST00000468963 PNMA6FA0A0J9YX94 578 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 HOXA13P31271 388 aaPredicted RBP17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 RFC2P35250 354 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 TRAF1Q13077 416 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 DGKDQ16760 1214 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 TMEM67Q5HYA8 995 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 DEFB128Q7Z7B8 93 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 HOMER1Q86YM7 354 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 RETREG2Q8NC44 543 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 NKX2-4Q9H2Z4 354 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 RBM8AQ9Y5S9 174 aaKnown RBP17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 MRVI1Q9Y6F6 885 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 TET1Q8NFU7 2136 aa17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 TRIP12Q14669 1992 aaPredicted RBP17.17■□□□□ 0.34
SDCCAG3-209ENST00000468963 SCN5AQ14524 2016 aa17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 GCOM1H8Y6P7 765 aaPredicted RBP17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 POLR2MP0CAP2 368 aa17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 MYCLP12524 364 aaPredicted RBP17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 RABGGTBP53611 331 aa17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 BFSP2Q13515 415 aa17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 SART3Q15020 963 aaKnown RBP17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 PGM5Q15124 567 aa17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 MYSM1Q5VVJ2 828 aa17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 GDF6Q6KF10 455 aaPredicted RBP17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 CATIPQ7Z7H3 387 aa17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 MAP3K14Q99558 947 aa17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 PRDM12Q9H4Q4 367 aa17.16■□□□□ 0.34
SDCCAG3-209ENST00000468963 MYH7BA7E2Y1 1941 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 HAS3O00219 553 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 PPFIA4O75335 1185 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 TGFB3P10600 412 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 HOXD8P13378 290 aaPredicted RBP17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 CHMP4BP1P59074 171 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 SP2Q02086 613 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 ADGRE1Q14246 886 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 GPNMBQ14956 572 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 PTGISQ16647 500 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 KCNV1Q6PIU1 500 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 DHX37Q8IY37 1157 aaKnown RBP17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 USP38Q8NB14 1042 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 IL31RAQ8NI17 732 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 PPTC7Q8NI37 304 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 MTA3Q9BTC8 594 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 LSG1Q9H089 658 aaKnown RBP17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 LY9Q9HBG7 655 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 PCDHA11Q9Y5I1 949 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 TRANK1O15050 2925 aa17.15■□□□□ 0.34
SDCCAG3-209ENST00000468963 ZBBXA8MT70 800 aa17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 MYOGP15173 224 aa17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 ATP2A2P16615 1042 aaKnown RBP17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 SMARCA1P28370 1054 aa17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 PSEN2P49810 448 aa17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 CELF3Q5SZQ8 465 aaKnown RBP17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 DHX38Q92620 1227 aaKnown RBP17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 SLC28A3Q9HAS3 691 aa17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 HDAC6Q9UBN7 1215 aa17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 GTF2IRD1Q9UHL9 959 aa17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 NOD1Q9Y239 953 aa17.14■□□□□ 0.33
SDCCAG3-209ENST00000468963 F2P00734 622 aa17.13■□□□□ 0.33
SDCCAG3-209ENST00000468963 ACTN1P12814 892 aa17.13■□□□□ 0.33
SDCCAG3-209ENST00000468963 COL9A3Q14050 684 aaPredicted RBP17.13■□□□□ 0.33
SDCCAG3-209ENST00000468963 HSDL1Q3SXM5 330 aa17.13■□□□□ 0.33
SDCCAG3-209ENST00000468963 FCHSD1Q86WN1 690 aa17.13■□□□□ 0.33
SDCCAG3-209ENST00000468963 CAGE1Q8TC20 777 aa17.13■□□□□ 0.33
SDCCAG3-209ENST00000468963 PHOSPHO2Q8TCD6 241 aa17.13■□□□□ 0.33
SDCCAG3-209ENST00000468963 GPKOWQ92917 476 aaPredicted RBP eCLIP17.13■□□□□ 0.33
SDCCAG3-209ENST00000468963 ZFP91Q96JP5 570 aaPredicted RBP17.13■□□□□ 0.33
SDCCAG3-209ENST00000468963 GAS2L1Q99501 681 aaPredicted RBP17.13■□□□□ 0.33
SDCCAG3-209ENST00000468963 GBF1Q92538 1859 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 GGPS1O95749 300 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 CCND2P30279 289 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 MRPS9P82933 396 aaKnown RBP17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 RBL2Q08999 1139 aa17.12■□□□□ 0.33
SDCCAG3-209ENST00000468963 MFSD10Q14728 455 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms