RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 IQCF3P0C7M6 154 aa20.13■□□□□ 0.81
TRIM56-203ENST00000467847 ARHGAP1Q07960 439 aa20.13■□□□□ 0.81
TRIM56-203ENST00000467847 PTGISQ16647 500 aa20.13■□□□□ 0.81
TRIM56-203ENST00000467847 TMEM67Q5HYA8 995 aa20.13■□□□□ 0.81
TRIM56-203ENST00000467847 ARHGEF16Q5VV41 709 aa20.13■□□□□ 0.81
TRIM56-203ENST00000467847 CHST3Q7LGC8 479 aa20.13■□□□□ 0.81
TRIM56-203ENST00000467847 FTOQ9C0B1 505 aaKnown RBP eCLIP20.13■□□□□ 0.81
TRIM56-203ENST00000467847 TET1Q8NFU7 2136 aa20.12■□□□□ 0.81
TRIM56-203ENST00000467847 TRANK1O15050 2925 aa20.12■□□□□ 0.81
TRIM56-203ENST00000467847 EIF2AK2P19525 551 aaKnown RBP20.12■□□□□ 0.81
TRIM56-203ENST00000467847 IFIT1BQ5T764 474 aaKnown RBP20.12■□□□□ 0.81
TRIM56-203ENST00000467847 MYH7BA7E2Y1 1941 aa20.12■□□□□ 0.81
TRIM56-203ENST00000467847 NCOR1O75376 2440 aa20.11■□□□□ 0.81
TRIM56-203ENST00000467847 CFBP00751 764 aa20.11■□□□□ 0.81
TRIM56-203ENST00000467847 CASTP20810 708 aaKnown RBP20.11■□□□□ 0.81
TRIM56-203ENST00000467847 CCDC155Q8N6L0 562 aa20.11■□□□□ 0.81
TRIM56-203ENST00000467847 SLC9A7Q96T83 725 aa20.11■□□□□ 0.81
TRIM56-203ENST00000467847 C1QTNF1Q9BXJ1 281 aa20.11■□□□□ 0.81
TRIM56-203ENST00000467847 AMNQ9BXJ7 453 aa20.11■□□□□ 0.81
TRIM56-203ENST00000467847 REV3LO60673 3130 aa20.11■□□□□ 0.81
TRIM56-203ENST00000467847 BDP1A6H8Y1 2624 aa20.1■□□□□ 0.81
TRIM56-203ENST00000467847 EIF3JO75822 258 aaKnown RBP20.1■□□□□ 0.81
TRIM56-203ENST00000467847 CA3P07451 260 aa20.1■□□□□ 0.81
TRIM56-203ENST00000467847 DGKDQ16760 1214 aa20.1■□□□□ 0.81
TRIM56-203ENST00000467847 GDF6Q6KF10 455 aaPredicted RBP20.1■□□□□ 0.81
TRIM56-203ENST00000467847 SESTD1Q86VW0 696 aa20.1■□□□□ 0.81
TRIM56-203ENST00000467847 MICALL1Q8N3F8 863 aa20.1■□□□□ 0.81
TRIM56-203ENST00000467847 STAG2Q8N3U4 1231 aa20.1■□□□□ 0.81
TRIM56-203ENST00000467847 CAGE1Q8TC20 777 aa20.1■□□□□ 0.81
TRIM56-203ENST00000467847 IL25Q9H293 177 aa20.1■□□□□ 0.81
TRIM56-203ENST00000467847 PXMP2Q9NR77 195 aa20.1■□□□□ 0.81
TRIM56-203ENST00000467847 DDX41Q9UJV9 622 aaKnown RBP20.1■□□□□ 0.81
TRIM56-203ENST00000467847 KLRF2D3W0D1 207 aa20.09■□□□□ 0.81
TRIM56-203ENST00000467847 NR3C2P08235 984 aa20.09■□□□□ 0.81
TRIM56-203ENST00000467847 HSD17B4P51659 736 aa20.09■□□□□ 0.81
TRIM56-203ENST00000467847 PHOSPHO2Q8TCD6 241 aa20.09■□□□□ 0.81
TRIM56-203ENST00000467847 AFAP1L1Q8TED9 768 aa20.09■□□□□ 0.81
TRIM56-203ENST00000467847 KAT2BQ92831 832 aa20.09■□□□□ 0.81
TRIM56-203ENST00000467847 MRVI1Q9Y6F6 885 aa20.09■□□□□ 0.81
TRIM56-203ENST00000467847 PRRC2BQ5JSZ5 2229 aaKnown RBP20.08■□□□□ 0.81
TRIM56-203ENST00000467847 OPLAHO14841 1288 aa20.08■□□□□ 0.81
TRIM56-203ENST00000467847 BAIAP3O94812 1187 aa20.08■□□□□ 0.81
TRIM56-203ENST00000467847 SEC23AQ15436 765 aa20.08■□□□□ 0.81
TRIM56-203ENST00000467847 CYB5R4Q7L1T6 521 aa20.08■□□□□ 0.81
TRIM56-203ENST00000467847 HERC6Q8IVU3 1022 aa20.08■□□□□ 0.81
TRIM56-203ENST00000467847 C7orf31Q8N865 590 aa20.08■□□□□ 0.81
TRIM56-203ENST00000467847 EMID1Q96A84 441 aaPredicted RBP20.08■□□□□ 0.81
TRIM56-203ENST00000467847 CTAGE1Q96RT6 745 aa20.08■□□□□ 0.81
TRIM56-203ENST00000467847 CERS4Q9HA82 394 aa20.08■□□□□ 0.81
TRIM56-203ENST00000467847 BAZ2BQ9UIF8 2168 aaKnown RBP20.07■□□□□ 0.8
TRIM56-203ENST00000467847 ZBTB5O15062 677 aa20.07■□□□□ 0.8
TRIM56-203ENST00000467847 PPP1R11O60927 126 aaPredicted RBP20.07■□□□□ 0.8
TRIM56-203ENST00000467847 TRDNQ13061 729 aa20.07■□□□□ 0.8
TRIM56-203ENST00000467847 LAMC2Q13753 1193 aa20.07■□□□□ 0.8
TRIM56-203ENST00000467847 DHX37Q8IY37 1157 aaKnown RBP20.07■□□□□ 0.8
TRIM56-203ENST00000467847 PPTC7Q8NI37 304 aa20.07■□□□□ 0.8
TRIM56-203ENST00000467847 KATNAL1Q9BW62 490 aa20.07■□□□□ 0.8
TRIM56-203ENST00000467847 MAD2L2Q9UI95 211 aa20.07■□□□□ 0.8
TRIM56-203ENST00000467847 PCDHA1Q9Y5I3 950 aa20.07■□□□□ 0.8
TRIM56-203ENST00000467847 XIRP2A4UGR9 3374 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 PTPRSQ13332 1948 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 KIF28PB7ZC32 967 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 ZNF286BP0CG31 522 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 MYCLP12524 364 aaPredicted RBP20.06■□□□□ 0.8
TRIM56-203ENST00000467847 SELPP16109 830 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 KCNJ6P48051 423 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 PSEN2P49810 448 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 GHRHRQ02643 423 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 AAK1Q2M2I8 961 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 LRRC8DQ7L1W4 858 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 DHX38Q92620 1227 aaKnown RBP20.06■□□□□ 0.8
TRIM56-203ENST00000467847 MTMR8Q96EF0 704 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 ALG1Q9BT22 464 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 MAP3K20Q9NYL2 800 aaKnown RBP20.06■□□□□ 0.8
TRIM56-203ENST00000467847 HDAC6Q9UBN7 1215 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 GTF2IRD1Q9UHL9 959 aa20.06■□□□□ 0.8
TRIM56-203ENST00000467847 PALM3A6NDB9 673 aaPredicted RBP20.05■□□□□ 0.8
TRIM56-203ENST00000467847 RFXAPO00287 272 aa20.05■□□□□ 0.8
TRIM56-203ENST00000467847 GTPBP6O43824 516 aaPredicted RBP20.05■□□□□ 0.8
TRIM56-203ENST00000467847 HOXA13P31271 388 aaPredicted RBP20.05■□□□□ 0.8
TRIM56-203ENST00000467847 MFSD10Q14728 455 aa20.05■□□□□ 0.8
TRIM56-203ENST00000467847 SKIV2LQ15477 1246 aaKnown RBP20.05■□□□□ 0.8
TRIM56-203ENST00000467847 TTC22Q5TAA0 569 aa20.05■□□□□ 0.8
TRIM56-203ENST00000467847 HOMER1Q86YM7 354 aa20.05■□□□□ 0.8
TRIM56-203ENST00000467847 NECAB3Q96P71 396 aaPredicted RBP20.05■□□□□ 0.8
TRIM56-203ENST00000467847 PDCD2LQ9BRP1 358 aa20.05■□□□□ 0.8
TRIM56-203ENST00000467847 HCN4Q9Y3Q4 1203 aa20.05■□□□□ 0.8
TRIM56-203ENST00000467847 TLL1O43897 1013 aa20.04■□□□□ 0.8
TRIM56-203ENST00000467847 F2P00734 622 aa20.04■□□□□ 0.8
TRIM56-203ENST00000467847 CKBP12277 381 aa20.04■□□□□ 0.8
TRIM56-203ENST00000467847 GSPT1P15170 499 aaKnown RBP20.04■□□□□ 0.8
TRIM56-203ENST00000467847 PDE4AP27815 886 aa20.04■□□□□ 0.8
TRIM56-203ENST00000467847 HOXD11P31277 338 aaPredicted RBP20.04■□□□□ 0.8
TRIM56-203ENST00000467847 TAP1Q03518 808 aa20.04■□□□□ 0.8
TRIM56-203ENST00000467847 RBL2Q08999 1139 aa20.04■□□□□ 0.8
TRIM56-203ENST00000467847 KIAA0753Q2KHM9 967 aa20.04■□□□□ 0.8
TRIM56-203ENST00000467847 KCNV1Q6PIU1 500 aa20.04■□□□□ 0.8
TRIM56-203ENST00000467847 STOX1Q6ZVD7 989 aa20.04■□□□□ 0.8
TRIM56-203ENST00000467847 ARNTL2Q8WYA1 636 aa20.04■□□□□ 0.8
TRIM56-203ENST00000467847 U3KPZ7 1027 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms