RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 ARNTL2Q8WYA1 636 aa14.34□□□□□ -0.11
RPA3-206ENST00000463632 ASB2Q96Q27 587 aa14.34□□□□□ -0.11
RPA3-206ENST00000463632 SLC9A7Q96T83 725 aa14.34□□□□□ -0.11
RPA3-206ENST00000463632 AMNQ9BXJ7 453 aa14.34□□□□□ -0.11
RPA3-206ENST00000463632 OSBPL3Q9H4L5 887 aa14.34□□□□□ -0.11
RPA3-206ENST00000463632 JMJD4Q9H9V9 463 aa14.34□□□□□ -0.11
RPA3-206ENST00000463632 COL20A1Q9P218 1284 aa14.34□□□□□ -0.11
RPA3-206ENST00000463632 KLRF2D3W0D1 207 aa14.33□□□□□ -0.12
RPA3-206ENST00000463632 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
RPA3-206ENST00000463632 EIF3JO75822 258 aaKnown RBP14.33□□□□□ -0.12
RPA3-206ENST00000463632 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
RPA3-206ENST00000463632 ARHGAP1Q07960 439 aa14.33□□□□□ -0.12
RPA3-206ENST00000463632 GDF6Q6KF10 455 aaPredicted RBP14.33□□□□□ -0.12
RPA3-206ENST00000463632 CCDC62Q6P9F0 684 aa14.33□□□□□ -0.12
RPA3-206ENST00000463632 STAG2Q8N3U4 1231 aa14.33□□□□□ -0.12
RPA3-206ENST00000463632 ANKS1AQ92625 1134 aa14.33□□□□□ -0.12
RPA3-206ENST00000463632 PCDHA1Q9Y5I3 950 aa14.33□□□□□ -0.12
RPA3-206ENST00000463632 IFIT3O14879 490 aaKnown RBP14.32□□□□□ -0.12
RPA3-206ENST00000463632 TLL1O43897 1013 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 ZNF286BP0CG31 522 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 HOXA13P31271 388 aaPredicted RBP14.32□□□□□ -0.12
RPA3-206ENST00000463632 PSEN2P49810 448 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 LAMC2Q13753 1193 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 LRRC8DQ7L1W4 858 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 RALYLQ86SE5 291 aaKnown RBP14.32□□□□□ -0.12
RPA3-206ENST00000463632 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 HERC6Q8IVU3 1022 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 CAGE1Q8TC20 777 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 PHOSPHO2Q8TCD6 241 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 ADAMTS19Q8TE59 1207 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 RUFY2Q8WXA3 655 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 PIBF1Q8WXW3 757 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 KATNAL1Q9BW62 490 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 PXMP2Q9NR77 195 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 HDAC6Q9UBN7 1215 aa14.32□□□□□ -0.12
RPA3-206ENST00000463632 SELPP16109 830 aa14.31□□□□□ -0.12
RPA3-206ENST00000463632 MFSD10Q14728 455 aa14.31□□□□□ -0.12
RPA3-206ENST00000463632 CYB5R4Q7L1T6 521 aa14.31□□□□□ -0.12
RPA3-206ENST00000463632 AFAP1L1Q8TED9 768 aa14.31□□□□□ -0.12
RPA3-206ENST00000463632 ZFP91Q96JP5 570 aaPredicted RBP14.31□□□□□ -0.12
RPA3-206ENST00000463632 SPATA33Q96N06 139 aa14.31□□□□□ -0.12
RPA3-206ENST00000463632 UHRF1Q96T88 793 aaPredicted RBP14.31□□□□□ -0.12
RPA3-206ENST00000463632 MAF1Q9H063 256 aa14.31□□□□□ -0.12
RPA3-206ENST00000463632 DDX41Q9UJV9 622 aaKnown RBP14.31□□□□□ -0.12
RPA3-206ENST00000463632 GCOM1H8Y6P7 765 aaPredicted RBP14.3□□□□□ -0.12
RPA3-206ENST00000463632 ZBTB5O15062 677 aa14.3□□□□□ -0.12
RPA3-206ENST00000463632 BAIAP3O94812 1187 aa14.3□□□□□ -0.12
RPA3-206ENST00000463632 POLR2MP0CAP2 368 aa14.3□□□□□ -0.12
RPA3-206ENST00000463632 TRAF1Q13077 416 aa14.3□□□□□ -0.12
RPA3-206ENST00000463632 SART3Q15020 963 aaKnown RBP14.3□□□□□ -0.12
RPA3-206ENST00000463632 KIAA0753Q2KHM9 967 aa14.3□□□□□ -0.12
RPA3-206ENST00000463632 AAK1Q2M2I8 961 aa14.3□□□□□ -0.12
RPA3-206ENST00000463632 FAM117BQ6P1L5 589 aa14.3□□□□□ -0.12
RPA3-206ENST00000463632 VWCEQ96DN2 955 aa14.3□□□□□ -0.12
RPA3-206ENST00000463632 MLXIPQ9HAP2 919 aa14.3□□□□□ -0.12
RPA3-206ENST00000463632 U3KPZ7 1027 aaPredicted RBP14.3□□□□□ -0.12
RPA3-206ENST00000463632 GGPS1O95749 300 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 CKBP12277 381 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 CCND2P30279 289 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 WTAPQ15007 396 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 KCNV1Q6PIU1 500 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 TMCO2Q7Z6W1 182 aaPredicted RBP14.29□□□□□ -0.12
RPA3-206ENST00000463632 PPTC7Q8NI37 304 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 KAT2BQ92831 832 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 PIGSQ96S52 555 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 PDCD2LQ9BRP1 358 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 GTF2IRD1Q9UHL9 959 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 MAD2L2Q9UI95 211 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 MTUS1Q9ULD2 1270 aa14.29□□□□□ -0.12
RPA3-206ENST00000463632 NOP56O00567 594 aaKnown RBP14.28□□□□□ -0.12
RPA3-206ENST00000463632 HSD17B4P51659 736 aa14.28□□□□□ -0.12
RPA3-206ENST00000463632 ZNF200P98182 395 aaPredicted RBP14.28□□□□□ -0.12
RPA3-206ENST00000463632 TFF2Q03403 129 aa14.28□□□□□ -0.12
RPA3-206ENST00000463632 TAP1Q03518 808 aa14.28□□□□□ -0.12
RPA3-206ENST00000463632 PTK7Q13308 1070 aa14.28□□□□□ -0.12
RPA3-206ENST00000463632 TTC22Q5TAA0 569 aa14.28□□□□□ -0.12
RPA3-206ENST00000463632 KRT40Q6A162 431 aa14.28□□□□□ -0.12
RPA3-206ENST00000463632 CNKSR3Q6P9H4 555 aa14.28□□□□□ -0.12
RPA3-206ENST00000463632 CATIPQ7Z7H3 387 aa14.28□□□□□ -0.12
RPA3-206ENST00000463632 SESTD1Q86VW0 696 aa14.28□□□□□ -0.12
RPA3-206ENST00000463632 DHX38Q92620 1227 aaKnown RBP14.28□□□□□ -0.12
RPA3-206ENST00000463632 UNC80Q8N2C7 3258 aa14.28□□□□□ -0.12
RPA3-206ENST00000463632 LRRC37A2A6NM11 1700 aa14.27□□□□□ -0.12
RPA3-206ENST00000463632 PPP1R11O60927 126 aaPredicted RBP14.27□□□□□ -0.13
RPA3-206ENST00000463632 PARNO95453 639 aaKnown RBP14.27□□□□□ -0.13
RPA3-206ENST00000463632 THPOP40225 353 aa14.27□□□□□ -0.13
RPA3-206ENST00000463632 WDR5P61964 334 aaKnown RBP14.27□□□□□ -0.13
RPA3-206ENST00000463632 IKBKEQ14164 716 aa14.27□□□□□ -0.13
RPA3-206ENST00000463632 PGM5Q15124 567 aa14.27□□□□□ -0.13
RPA3-206ENST00000463632 SEC23AQ15436 765 aa14.27□□□□□ -0.13
RPA3-206ENST00000463632 CELF3Q5SZQ8 465 aaKnown RBP14.27□□□□□ -0.13
RPA3-206ENST00000463632 NCOA7Q8NI08 942 aa14.27□□□□□ -0.13
RPA3-206ENST00000463632 NECAB3Q96P71 396 aaPredicted RBP14.27□□□□□ -0.13
RPA3-206ENST00000463632 IL25Q9H293 177 aa14.27□□□□□ -0.13
RPA3-206ENST00000463632 MAP3K20Q9NYL2 800 aaKnown RBP14.27□□□□□ -0.13
RPA3-206ENST00000463632 SUPT16HQ9Y5B9 1047 aaKnown RBP14.27□□□□□ -0.13
RPA3-206ENST00000463632 MTCH2Q9Y6C9 303 aa14.27□□□□□ -0.13
RPA3-206ENST00000463632 ABHD14A-ACY1A0A1B0GW23 586 aa14.26□□□□□ -0.13
RPA3-206ENST00000463632 PALM3A6NDB9 673 aaPredicted RBP14.26□□□□□ -0.13
RPA3-206ENST00000463632 EPOPA6NHQ4 379 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms