RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 B4E1Z4 1266 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 HIP1O00291 1037 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 BMP1P13497 986 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 COL9A1P20849 921 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 TAP1Q03518 808 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 SKIV2LQ15477 1246 aaKnown RBP23.08■■□□□ 1.29
VARS-221ENST00000463184 DGKDQ16760 1214 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 ARHGEF16Q5VV41 709 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 GDF6Q6KF10 455 aaPredicted RBP23.08■■□□□ 1.29
VARS-221ENST00000463184 B4GALNT3Q6L9W6 998 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 CHST3Q7LGC8 479 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 CHD1LQ86WJ1 897 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 ENAHQ8N8S7 591 aaPredicted RBP23.08■■□□□ 1.29
VARS-221ENST00000463184 KAT2BQ92831 832 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 DSCC1Q9BVC3 393 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 DIAPH3Q9NSV4 1193 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 ZSWIM5Q9P217 1185 aa23.08■■□□□ 1.29
VARS-221ENST00000463184 DDX41Q9UJV9 622 aaKnown RBP23.08■■□□□ 1.29
VARS-221ENST00000463184 TANC1Q9C0D5 1861 aa23.07■■□□□ 1.28
VARS-221ENST00000463184 DHX16O60231 1041 aaKnown RBP23.07■■□□□ 1.28
VARS-221ENST00000463184 EIF3JO75822 258 aaKnown RBP23.07■■□□□ 1.28
VARS-221ENST00000463184 SELPP16109 830 aa23.07■■□□□ 1.28
VARS-221ENST00000463184 KCNJ6P48051 423 aa23.07■■□□□ 1.28
VARS-221ENST00000463184 IMMTQ16891 758 aaKnown RBP23.07■■□□□ 1.28
VARS-221ENST00000463184 EMID1Q96A84 441 aaPredicted RBP23.07■■□□□ 1.28
VARS-221ENST00000463184 CTAGE1Q96RT6 745 aa23.07■■□□□ 1.28
VARS-221ENST00000463184 KRT23Q9C075 422 aa23.07■■□□□ 1.28
VARS-221ENST00000463184 JMJD4Q9H9V9 463 aa23.07■■□□□ 1.28
VARS-221ENST00000463184 VAT1LQ9HCJ6 419 aa23.07■■□□□ 1.28
VARS-221ENST00000463184 CTNNA3Q9UI47 895 aa23.07■■□□□ 1.28
VARS-221ENST00000463184 REV3LO60673 3130 aa23.06■■□□□ 1.28
VARS-221ENST00000463184 EPOPA6NHQ4 379 aa23.06■■□□□ 1.28
VARS-221ENST00000463184 RBL2Q08999 1139 aa23.06■■□□□ 1.28
VARS-221ENST00000463184 LAMC2Q13753 1193 aa23.06■■□□□ 1.28
VARS-221ENST00000463184 ARNTL2Q8WYA1 636 aa23.06■■□□□ 1.28
VARS-221ENST00000463184 KATNAL1Q9BW62 490 aa23.06■■□□□ 1.28
VARS-221ENST00000463184 GTF2IRD1Q9UHL9 959 aa23.06■■□□□ 1.28
VARS-221ENST00000463184 TRIP12Q14669 1992 aaPredicted RBP23.06■■□□□ 1.28
VARS-221ENST00000463184 TET1Q8NFU7 2136 aa23.06■■□□□ 1.28
VARS-221ENST00000463184 XIRP2A4UGR9 3374 aa23.06■■□□□ 1.28
VARS-221ENST00000463184 TLL1O43897 1013 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 NR3C2P08235 984 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 EIF2AK2P19525 551 aaKnown RBP23.05■■□□□ 1.28
VARS-221ENST00000463184 NUCB1Q02818 461 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 TFF2Q03403 129 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 GPNMBQ14956 572 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 LRRC8DQ7L1W4 858 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 C7orf31Q8N865 590 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 CNNM2Q9H8M5 875 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 PXMP2Q9NR77 195 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 COG5Q9UP83 839 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 MRVI1Q9Y6F6 885 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 PRRC2BQ5JSZ5 2229 aaKnown RBP23.05■■□□□ 1.28
VARS-221ENST00000463184 TRANK1O15050 2925 aa23.05■■□□□ 1.28
VARS-221ENST00000463184 ARHGEF15O94989 841 aa23.04■■□□□ 1.28
VARS-221ENST00000463184 CFBP00751 764 aa23.04■■□□□ 1.28
VARS-221ENST00000463184 WDR5P61964 334 aaKnown RBP23.04■■□□□ 1.28
VARS-221ENST00000463184 CNKSR3Q6P9H4 555 aa23.04■■□□□ 1.28
VARS-221ENST00000463184 PPTC7Q8NI37 304 aa23.04■■□□□ 1.28
VARS-221ENST00000463184 DHX38Q92620 1227 aaKnown RBP23.04■■□□□ 1.28
VARS-221ENST00000463184 UBAC1Q9BSL1 405 aa23.04■■□□□ 1.28
VARS-221ENST00000463184 AMNQ9BXJ7 453 aa23.04■■□□□ 1.28
VARS-221ENST00000463184 MAP3K20Q9NYL2 800 aaKnown RBP23.04■■□□□ 1.28
VARS-221ENST00000463184 HDAC6Q9UBN7 1215 aa23.04■■□□□ 1.28
VARS-221ENST00000463184 NCOR1O75376 2440 aa23.04■■□□□ 1.28
VARS-221ENST00000463184 KIAA1217Q5T5P2 1943 aa23.04■■□□□ 1.28
VARS-221ENST00000463184 CXCL10P02778 98 aa23.03■■□□□ 1.28
VARS-221ENST00000463184 CKBP12277 381 aa23.03■■□□□ 1.28
VARS-221ENST00000463184 PSEN2P49810 448 aa23.03■■□□□ 1.28
VARS-221ENST00000463184 HSD17B4P51659 736 aa23.03■■□□□ 1.28
VARS-221ENST00000463184 GHRHRQ02643 423 aa23.03■■□□□ 1.28
VARS-221ENST00000463184 IFIT1BQ5T764 474 aaKnown RBP23.03■■□□□ 1.28
VARS-221ENST00000463184 DHX37Q8IY37 1157 aaKnown RBP23.03■■□□□ 1.28
VARS-221ENST00000463184 SAMD3Q8N6K7 520 aa23.03■■□□□ 1.28
VARS-221ENST00000463184 LAMA4Q16363 1823 aa23.03■■□□□ 1.28
VARS-221ENST00000463184 PTK7Q13308 1070 aa23.02■■□□□ 1.28
VARS-221ENST00000463184 MFSD10Q14728 455 aa23.02■■□□□ 1.28
VARS-221ENST00000463184 KCNV1Q6PIU1 500 aa23.02■■□□□ 1.28
VARS-221ENST00000463184 ALG1Q9BT22 464 aa23.02■■□□□ 1.28
VARS-221ENST00000463184 ZBED2Q9BTP6 218 aa23.02■■□□□ 1.28
VARS-221ENST00000463184 ABHD14A-ACY1A0A1B0GW23 586 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 HAS3O00219 553 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 NBNO60934 754 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 EFCAB14O75071 495 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 F2P00734 622 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 KCNQ1P51787 676 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 GRB10Q13322 594 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 KIAA0753Q2KHM9 967 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 KRT40Q6A162 431 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 STAG2Q8N3U4 1231 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 MTMR8Q96EF0 704 aa23.01■■□□□ 1.27
VARS-221ENST00000463184 NECAB3Q96P71 396 aaPredicted RBP23.01■■□□□ 1.27
VARS-221ENST00000463184 TCF20Q9UGU0 1960 aaKnown RBP23.01■■□□□ 1.27
VARS-221ENST00000463184 MYH6P13533 1939 aa23■■□□□ 1.27
VARS-221ENST00000463184 KLRF2D3W0D1 207 aa23■■□□□ 1.27
VARS-221ENST00000463184 OPLAHO14841 1288 aa23■■□□□ 1.27
VARS-221ENST00000463184 ZBTB5O15062 677 aa23■■□□□ 1.27
VARS-221ENST00000463184 PPFIA4O75335 1185 aa23■■□□□ 1.27
VARS-221ENST00000463184 IGHDP01880 384 aa23■■□□□ 1.27
VARS-221ENST00000463184 HOXD8P13378 290 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms