RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 ZNF576Q9H609 170 aa20.51■□□□□ 0.87
COL1A2-202ENST00000461525 DDX41Q9UJV9 622 aaKnown RBP20.51■□□□□ 0.87
COL1A2-202ENST00000461525 PFKMP08237 780 aa20.5■□□□□ 0.87
COL1A2-202ENST00000461525 MYCLP12524 364 aaPredicted RBP20.5■□□□□ 0.87
COL1A2-202ENST00000461525 CASTP20810 708 aaKnown RBP20.5■□□□□ 0.87
COL1A2-202ENST00000461525 PBX2P40425 430 aa20.5■□□□□ 0.87
COL1A2-202ENST00000461525 GRIN2CQ14957 1233 aa20.5■□□□□ 0.87
COL1A2-202ENST00000461525 CASC1Q6TDU7 716 aa20.5■□□□□ 0.87
COL1A2-202ENST00000461525 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.5■□□□□ 0.87
COL1A2-202ENST00000461525 CTCFLQ8NI51 663 aaPredicted RBP20.5■□□□□ 0.87
COL1A2-202ENST00000461525 LAMA2P24043 3122 aaKnown RBP20.5■□□□□ 0.87
COL1A2-202ENST00000461525 DDAH1O94760 285 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 LAMC2Q13753 1193 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 PGM5Q15124 567 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 RAB30Q15771 203 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 DGKDQ16760 1214 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 ZNF654Q8IZM8 581 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 RETREG2Q8NC44 543 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 PIBF1Q8WXW3 757 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 EMID1Q96A84 441 aaPredicted RBP20.49■□□□□ 0.87
COL1A2-202ENST00000461525 ESYT1Q9BSJ8 1104 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 MTA3Q9BTC8 594 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 LSG1Q9H089 658 aaKnown RBP20.49■□□□□ 0.87
COL1A2-202ENST00000461525 LY9Q9HBG7 655 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 MSRAQ9UJ68 235 aa20.49■□□□□ 0.87
COL1A2-202ENST00000461525 ZBBXA8MT70 800 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 PITPNM1O00562 1244 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 PRC1O43663 620 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 KIF5BP33176 963 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 VSIG10LQ86VR7 867 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 FCHSD1Q86WN1 690 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 DHX37Q8IY37 1157 aaKnown RBP20.48■□□□□ 0.87
COL1A2-202ENST00000461525 IL31RAQ8NI17 732 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 PPTC7Q8NI37 304 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 KAT2BQ92831 832 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 MAP3K14Q99558 947 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 MYL10Q9BUA6 226 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 SLC4A7Q9Y6M7 1214 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 SCN10AQ9Y5Y9 1956 aa20.48■□□□□ 0.87
COL1A2-202ENST00000461525 SLC27A2O14975 620 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 RGS20O76081 388 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 CCND2P30279 289 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 MCM5P33992 734 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 RFC2P35250 354 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 BFSP2Q13515 415 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 PTGISQ16647 500 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 KCNV1Q6PIU1 500 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 NFXL1Q6ZNB6 911 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 DEFB128Q7Z7B8 93 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 SESTD1Q86VW0 696 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 VWCEQ96DN2 955 aa20.47■□□□□ 0.87
COL1A2-202ENST00000461525 TMTC2Q8N394 836 aa20.46■□□□□ 0.87
COL1A2-202ENST00000461525 CCDC155Q8N6L0 562 aa20.46■□□□□ 0.87
COL1A2-202ENST00000461525 RRP36Q96EU6 259 aaKnown RBP20.46■□□□□ 0.87
COL1A2-202ENST00000461525 TMEM87BQ96K49 555 aa20.46■□□□□ 0.87
COL1A2-202ENST00000461525 LZTS2Q9BRK4 669 aa20.46■□□□□ 0.87
COL1A2-202ENST00000461525 KATNAL1Q9BW62 490 aa20.46■□□□□ 0.87
COL1A2-202ENST00000461525 SPZ1Q9BXG8 430 aa20.46■□□□□ 0.87
COL1A2-202ENST00000461525 ANO2Q9NQ90 1003 aa20.46■□□□□ 0.87
COL1A2-202ENST00000461525 CCDC69A6NI79 296 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 SH2B2O14492 632 aaPredicted RBP20.45■□□□□ 0.86
COL1A2-202ENST00000461525 GGPS1O95749 300 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 IQCF3P0C7M6 154 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 ZNF286BP0CG31 522 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 ACTN1P12814 892 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 PSEN2P49810 448 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 GNAQP50148 359 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 BMP2KLQ5H9B9 411 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 CREB3L3Q68CJ9 461 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 GDF6Q6KF10 455 aaPredicted RBP20.45■□□□□ 0.86
COL1A2-202ENST00000461525 CENPQQ7L2Z9 268 aaPredicted RBP20.45■□□□□ 0.86
COL1A2-202ENST00000461525 C7orf31Q8N865 590 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 SPATA33Q96N06 139 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 NKX2-4Q9H2Z4 354 aa20.45■□□□□ 0.86
COL1A2-202ENST00000461525 SEC63Q9UGP8 760 aaKnown RBP20.45■□□□□ 0.86
COL1A2-202ENST00000461525 SORBS3O60504 671 aa20.44■□□□□ 0.86
COL1A2-202ENST00000461525 F2P00734 622 aa20.44■□□□□ 0.86
COL1A2-202ENST00000461525 TGFB3P10600 412 aa20.44■□□□□ 0.86
COL1A2-202ENST00000461525 ATP2A2P16615 1042 aaKnown RBP20.44■□□□□ 0.86
COL1A2-202ENST00000461525 UBA1P22314 1058 aaKnown RBP20.44■□□□□ 0.86
COL1A2-202ENST00000461525 MFSD10Q14728 455 aa20.44■□□□□ 0.86
COL1A2-202ENST00000461525 CELF3Q5SZQ8 465 aaKnown RBP20.44■□□□□ 0.86
COL1A2-202ENST00000461525 MYSM1Q5VVJ2 828 aa20.44■□□□□ 0.86
COL1A2-202ENST00000461525 CAGE1Q8TC20 777 aa20.44■□□□□ 0.86
COL1A2-202ENST00000461525 ZFP91Q96JP5 570 aaPredicted RBP20.44■□□□□ 0.86
COL1A2-202ENST00000461525 GAS2L1Q99501 681 aaPredicted RBP20.44■□□□□ 0.86
COL1A2-202ENST00000461525 ALG1Q9BT22 464 aa20.44■□□□□ 0.86
COL1A2-202ENST00000461525 SLC28A3Q9HAS3 691 aa20.44■□□□□ 0.86
COL1A2-202ENST00000461525 GTF2IRD1Q9UHL9 959 aa20.44■□□□□ 0.86
COL1A2-202ENST00000461525 YBX2Q9Y2T7 364 aaKnown RBP20.44■□□□□ 0.86
COL1A2-202ENST00000461525 CUL9Q8IWT3 2517 aa20.43■□□□□ 0.86
COL1A2-202ENST00000461525 HOXD8P13378 290 aaPredicted RBP20.43■□□□□ 0.86
COL1A2-202ENST00000461525 SMARCA1P28370 1054 aa20.43■□□□□ 0.86
COL1A2-202ENST00000461525 NECTIN1Q15223 517 aa20.43■□□□□ 0.86
COL1A2-202ENST00000461525 GNPTABQ3T906 1256 aa20.43■□□□□ 0.86
COL1A2-202ENST00000461525 AFAP1L1Q8TED9 768 aa20.43■□□□□ 0.86
COL1A2-202ENST00000461525 CUL5Q93034 780 aa20.43■□□□□ 0.86
COL1A2-202ENST00000461525 CTAGE1Q96RT6 745 aa20.43■□□□□ 0.86
COL1A2-202ENST00000461525 FTOQ9C0B1 505 aaKnown RBP eCLIP20.43■□□□□ 0.86
COL1A2-202ENST00000461525 PRDM12Q9H4Q4 367 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms