RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 SPRYD3Q8NCJ5 442 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 PDGFCQ9NRA1 345 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 NRBP1Q9UHY1 535 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
SSBP1-202ENST00000461433 B4DLN1 442 aa12.88□□□□□ -0.35
SSBP1-202ENST00000461433 KIF28PB7ZC32 967 aa12.88□□□□□ -0.35
SSBP1-202ENST00000461433 ADCY6O43306 1168 aa12.88□□□□□ -0.35
SSBP1-202ENST00000461433 EIF3JO75822 258 aaKnown RBP12.88□□□□□ -0.35
SSBP1-202ENST00000461433 MYCLP12524 364 aaPredicted RBP12.88□□□□□ -0.35
SSBP1-202ENST00000461433 ARHGAP4P98171 946 aa12.88□□□□□ -0.35
SSBP1-202ENST00000461433 BECN1Q14457 450 aa12.88□□□□□ -0.35
SSBP1-202ENST00000461433 TMEM63BQ5T3F8 832 aa12.88□□□□□ -0.35
SSBP1-202ENST00000461433 FBXO16Q8IX29 292 aaPredicted RBP12.88□□□□□ -0.35
SSBP1-202ENST00000461433 MPHOSPH6Q99547 160 aaKnown RBP12.88□□□□□ -0.35
SSBP1-202ENST00000461433 VTA1Q9NP79 307 aa12.88□□□□□ -0.35
SSBP1-202ENST00000461433 CNPY2Q9Y2B0 182 aa12.88□□□□□ -0.35
SSBP1-202ENST00000461433 RBM47A0AV96 593 aaKnown RBP12.87□□□□□ -0.35
SSBP1-202ENST00000461433 CYP3A4P08684 503 aa12.87□□□□□ -0.35
SSBP1-202ENST00000461433 SYT1P21579 422 aa12.87□□□□□ -0.35
SSBP1-202ENST00000461433 U2AF2P26368 475 aaKnown RBP eCLIP12.87□□□□□ -0.35
SSBP1-202ENST00000461433 CCND2P30279 289 aa12.87□□□□□ -0.35
SSBP1-202ENST00000461433 XRRA1Q6P2D8 792 aa12.87□□□□□ -0.35
SSBP1-202ENST00000461433 KRT25Q7Z3Z0 450 aa12.87□□□□□ -0.35
SSBP1-202ENST00000461433 TBCKQ8TEA7 893 aa12.87□□□□□ -0.35
SSBP1-202ENST00000461433 UNC93B1Q9H1C4 597 aa12.87□□□□□ -0.35
SSBP1-202ENST00000461433 FOXP1Q9H334 677 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-202ENST00000461433 RTEL1Q9NZ71 1219 aa12.87□□□□□ -0.35
SSBP1-202ENST00000461433 UBIAD1Q9Y5Z9 338 aa12.87□□□□□ -0.35
SSBP1-202ENST00000461433 FRMPD3Q5JV73 1810 aa12.87□□□□□ -0.35
SSBP1-202ENST00000461433 STAM2O75886 525 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 HSP90AA1P07900 732 aaKnown RBP12.86□□□□□ -0.35
SSBP1-202ENST00000461433 CCL5P13501 91 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 ITGB5P18084 799 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 CCDC144BQ3MJ40 725 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 PIK3AP1Q6ZUJ8 805 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 CYP2W1Q8TAV3 490 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 INPP4AQ96PE3 977 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-202ENST00000461433 EHMT1Q9H9B1 1298 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 BRMS1Q9HCU9 246 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 HMX1Q9NP08 348 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-202ENST00000461433 PAK6Q9NQU5 681 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-202ENST00000461433 ZHX1Q9UKY1 873 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-202ENST00000461433 RBM19Q9Y4C8 960 aaKnown RBP12.86□□□□□ -0.35
SSBP1-202ENST00000461433 BRCA2P51587 3418 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 IGLV3-22A0A075B6J6 115 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-202ENST00000461433 FAM86B1E9PN63 330 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 SEPT4O43236 478 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 ARIH2O95376 493 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 MYCP01106 439 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-202ENST00000461433 FAM86B2P0C5J1 330 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 CIITAP33076 1130 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 ADCYAP1R1P41586 468 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 USP11P51784 963 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 SEMA3FQ13275 785 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 NONOQ15233 471 aaKnown RBP eCLIP12.86□□□□□ -0.35
SSBP1-202ENST00000461433 SAFBQ15424 915 aaKnown RBP eCLIP12.86□□□□□ -0.35
SSBP1-202ENST00000461433 INF2Q27J81 1249 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 CCDC62Q6P9F0 684 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 SEPT14Q6ZU15 432 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 WDR11Q9BZH6 1224 aa12.86□□□□□ -0.35
SSBP1-202ENST00000461433 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 H3BQV1 296 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 WNT7AO00755 349 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 PDCP20941 246 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 PTGS1P23219 599 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 ICAM3P32942 547 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 LHX8Q68G74 356 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 IQSEC1Q6DN90 963 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 MXRA8Q9BRK3 442 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.85□□□□□ -0.35
SSBP1-202ENST00000461433 JADE2Q9NQC1 790 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 MTMR6Q9Y217 621 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 DOCK5Q9H7D0 1870 aa12.85□□□□□ -0.35
SSBP1-202ENST00000461433 CYP3A7-CYP3A51PA0A087WV96 503 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 SPATA31C2B4DYI2 1134 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 MEIS1O00470 390 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 AKR1A1P14550 325 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 SMPD1P17405 629 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 CYP3A7P24462 503 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 CNGA1P29973 690 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 SP2Q02086 613 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 CEP55Q53EZ4 464 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 NOSTRINQ8IVI9 506 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 SCFD2Q8WU76 684 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 LENG9Q96B70 501 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 LENG1Q96BZ8 264 aaPredicted RBP12.84□□□□□ -0.35
SSBP1-202ENST00000461433 MBOAT7Q96N66 472 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 RNF208Q9H0X6 261 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 DDX20Q9UHI6 824 aaKnown RBP12.84□□□□□ -0.35
SSBP1-202ENST00000461433 DDX41Q9UJV9 622 aaKnown RBP12.84□□□□□ -0.35
SSBP1-202ENST00000461433 FAM184BQ9ULE4 1060 aa12.84□□□□□ -0.35
SSBP1-202ENST00000461433 GNEQ9Y223 722 aaKnown RBP12.84□□□□□ -0.35
SSBP1-202ENST00000461433 STX6O43752 255 aa12.83□□□□□ -0.35
SSBP1-202ENST00000461433 CAPN15O75808 1086 aa12.83□□□□□ -0.35
SSBP1-202ENST00000461433 TDP2O95551 362 aa12.83□□□□□ -0.35
SSBP1-202ENST00000461433 TNFAIP2Q03169 654 aa12.83□□□□□ -0.35
SSBP1-202ENST00000461433 PKP1Q13835 747 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms