RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 MTIF3Q9H2K0 278 aaKnown RBP10.26□□□□□ -0.77
SOX2-OT-202ENST00000461063 VAT1LQ9HCJ6 419 aa10.26□□□□□ -0.77
SOX2-OT-202ENST00000461063 MSRAQ9UJ68 235 aa10.26□□□□□ -0.77
SOX2-OT-202ENST00000461063 DHX16O60231 1041 aaKnown RBP10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 PTPN11Q06124 597 aaPredicted RBP10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 SEC23AQ15436 765 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 RAB30Q15771 203 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 LY6KQ17RY6 165 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 FAM47CQ5HY64 1035 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 IFIT1BQ5T764 474 aaKnown RBP10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 TTC22Q5TAA0 569 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 NFRKBQ6P4R8 1299 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 CYB5R4Q7L1T6 521 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 MCF2L2Q86YR7 1114 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 STAG2Q8N3U4 1231 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 USP38Q8NB14 1042 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 IWS1Q96ST2 819 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 RMDN3Q96TC7 470 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 PRDM12Q9H4Q4 367 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 YBX2Q9Y2T7 364 aaKnown RBP10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 MRPL11Q9Y3B7 192 aaKnown RBP10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 SUPT16HQ9Y5B9 1047 aaKnown RBP10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 LAMA4Q16363 1823 aa10.25□□□□□ -0.77
SOX2-OT-202ENST00000461063 KLRF2D3W0D1 207 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 OPLAHO14841 1288 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 PPP1R11O60927 126 aaPredicted RBP10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 GH1P01241 217 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 EIF2AK2P19525 551 aaKnown RBP10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 GHRHRQ02643 423 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 ARHGAP1Q07960 439 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 STXBP2Q15833 593 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 ARHGEF16Q5VV41 709 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 SEPT14Q6ZU15 432 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 DEFB128Q7Z7B8 93 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 AFG1LQ8WV93 481 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 MTMR8Q96EF0 704 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 AMNQ9BXJ7 453 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 NKX2-4Q9H2Z4 354 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 MAD2L2Q9UI95 211 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 CIZ1Q9ULV3 898 aaPredicted RBP10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 SLC4A7Q9Y6M7 1214 aa10.24□□□□□ -0.77
SOX2-OT-202ENST00000461063 PALM3A6NDB9 673 aaPredicted RBP10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 ZBBXA8MT70 800 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 EIF3JO75822 258 aaKnown RBP10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 CFBP00751 764 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 NR3C2P08235 984 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 PFKMP08237 780 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 MMP3P08254 477 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 CYP21A2P08686 494 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 CHMLP26374 656 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 RFC2P35250 354 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 PSEN1P49768 467 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 HSD17B4P51659 736 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 RABGGTBP53611 331 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 PTH1RQ03431 593 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 ADGRE1Q14246 886 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 SLC35G1Q2M3R5 365 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 CHST3Q7LGC8 479 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 PDCD7Q8N8D1 485 aaKnown RBP10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 KAT2BQ92831 832 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 GAS2L1Q99501 681 aaPredicted RBP10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 SLC28A3Q9HAS3 691 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 PXMP2Q9NR77 195 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 DDX41Q9UJV9 622 aaKnown RBP10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 TRANK1O15050 2925 aa10.23□□□□□ -0.77
SOX2-OT-202ENST00000461063 MUC3AQ02505 3323 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 TTC28Q96AY4 2481 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 ZBTB5O15062 677 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 IQCF3P0C7M6 154 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 MYOGP15173 224 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 ATP2A2P16615 1042 aaKnown RBP10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 CHMP4BP1P59074 171 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 TRDNQ13061 729 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 PTGISQ16647 500 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 STOX1Q6ZVD7 989 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 SESTD1Q86VW0 696 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 RETREG2Q8NC44 543 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 EMID1Q96A84 441 aaPredicted RBP10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 CTAGE1Q96RT6 745 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 SENP2Q9HC62 589 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 NOD1Q9Y239 953 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 PCDHA11Q9Y5I1 949 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 PCDHA1Q9Y5I3 950 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 TAF6LQ9Y6J9 622 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 XIRP2A4UGR9 3374 aa10.22□□□□□ -0.77
SOX2-OT-202ENST00000461063 SCN10AQ9Y5Y9 1956 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 E7EWF7 191 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 IFIT3O14879 490 aaKnown RBP10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 RGS20O76081 388 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 ACTN1P12814 892 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 CASTP20810 708 aaKnown RBP10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 HOXA13P31271 388 aaPredicted RBP10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 BFSP2Q13515 415 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 LAMC2Q13753 1193 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 GRM4Q14833 912 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 DGKDQ16760 1214 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 PPP2R2DQ66LE6 453 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 GDF6Q6KF10 455 aaPredicted RBP10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 RUFY2Q8WXA3 655 aa10.21□□□□□ -0.77
SOX2-OT-202ENST00000461063 PPM1EQ8WY54 764 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms