RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 CREB3L3Q68CJ9 461 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 IQCA1Q86XH1 822 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 ZKSCAN3Q9BRR0 538 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 MTA3Q9BTC8 594 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 CD320Q9NPF0 282 aa15.95■□□□□ 0.14
SCAMP4-206ENST00000460767 TET1Q8NFU7 2136 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 A6NJR5 290 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 ICAM1P05362 532 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 ALDH5A1P51649 535 aaPredicted RBP15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 LEXMQ3ZCV2 418 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 BRDTQ58F21 947 aaPredicted RBP15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 KCTD1Q719H9 257 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 EEPD1Q7L9B9 569 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 FAM178BQ8IXR5 827 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 RETREG2Q8NC44 543 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 CAGE1Q8TC20 777 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 IGDCC4Q8TDY8 1250 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 AFAP1L1Q8TED9 768 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 WDR11Q9BZH6 1224 aa15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 UBE2ZQ9H832 354 aaPredicted RBP15.94■□□□□ 0.14
SCAMP4-206ENST00000460767 MUC6Q6W4X9 2439 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 FAM86C2PA6NEL3 165 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 EPB41L2O43491 1005 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 KCNJ6P48051 423 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 WDR5P61964 334 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 NBPF20Q3BBV1 942 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 SESTD1Q86VW0 696 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 CCDC155Q8N6L0 562 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 PNMA1Q8ND90 353 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 NCOA7Q8NI08 942 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 RANBP17Q9H2T7 1088 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 ANO2Q9NQ90 1003 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 GPHNQ9NQX3 736 aaPredicted RBP15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 PRR12Q9ULL5 1215 aa15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 DDX49Q9Y6V7 483 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-206ENST00000460767 COL4A6Q14031 1691 aa15.92■□□□□ 0.14
SCAMP4-206ENST00000460767 EDNRBP24530 442 aa15.92■□□□□ 0.14
SCAMP4-206ENST00000460767 ERVK-21P61565 698 aa15.92■□□□□ 0.14
SCAMP4-206ENST00000460767 TROAPQ12815 778 aa15.92■□□□□ 0.14
SCAMP4-206ENST00000460767 TTBK2Q6IQ55 1244 aa15.92■□□□□ 0.14
SCAMP4-206ENST00000460767 ALYREFQ86V81 257 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-206ENST00000460767 GJD3Q8N144 294 aa15.92■□□□□ 0.14
SCAMP4-206ENST00000460767 OR6J1Q8NGC5 347 aa15.92■□□□□ 0.14
SCAMP4-206ENST00000460767 SENP2Q9HC62 589 aa15.92■□□□□ 0.14
SCAMP4-206ENST00000460767 CCPG1Q9ULG6 757 aa15.92■□□□□ 0.14
SCAMP4-206ENST00000460767 GJB5O95377 273 aa15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 CXCL10P02778 98 aa15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 MYL3P08590 195 aa15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 ALADP13716 330 aa15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 IKQ13123 557 aaPredicted RBP15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 PUS10Q3MIT2 529 aaKnown RBP15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 NSMFQ6X4W1 530 aa15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 SPRED2Q7Z698 418 aa15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 GDPD5Q8WTR4 605 aa15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 FTOQ9C0B1 505 aaKnown RBP eCLIP15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 PNMA2Q9UL42 364 aa15.91■□□□□ 0.14
SCAMP4-206ENST00000460767 BRWD1Q9NSI6 2320 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 LCHNA4D1U4 455 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 EFCAB14O75071 495 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 HSPA4P34932 840 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 TRDNQ13061 729 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 GPNMBQ14956 572 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 PPP2R5BQ15173 497 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 SLC35G1Q2M3R5 365 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 FAM47CQ5HY64 1035 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 GPATCH4Q5T3I0 446 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 CNKSR3Q6P9H4 555 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 CASC1Q6TDU7 716 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 SCFD2Q8WU76 684 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 TGS1Q96RS0 853 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 CTAGE1Q96RT6 745 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 MPHOSPH6Q99547 160 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 UBAC1Q9BSL1 405 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 SUGCTQ9HAC7 445 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 LY9Q9HBG7 655 aa15.9■□□□□ 0.14
SCAMP4-206ENST00000460767 ABHD14A-ACY1A0A1B0GW23 586 aa15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 PALM3A6NDB9 673 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 EXOSC10Q01780 885 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 BAATQ14032 418 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 IFIT1BQ5T764 474 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 SYDE2Q5VT97 1194 aa15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 DNERQ8NFT8 737 aa15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 MTMR8Q96EF0 704 aa15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 PURBQ96QR8 312 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 RAD9AQ99638 391 aa15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 MAF1Q9H063 256 aa15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 TRIP12Q14669 1992 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 WDR19Q8NEZ3 1342 aa15.89■□□□□ 0.13
SCAMP4-206ENST00000460767 LINC01553A4QN01 128 aa15.88■□□□□ 0.13
SCAMP4-206ENST00000460767 SELPP16109 830 aa15.88■□□□□ 0.13
SCAMP4-206ENST00000460767 SLC16A2P36021 539 aa15.88■□□□□ 0.13
SCAMP4-206ENST00000460767 MRE11P49959 708 aa15.88■□□□□ 0.13
SCAMP4-206ENST00000460767 ADCK5Q3MIX3 580 aa15.88■□□□□ 0.13
SCAMP4-206ENST00000460767 ASPRV1Q53RT3 343 aa15.88■□□□□ 0.13
SCAMP4-206ENST00000460767 LRRC8DQ7L1W4 858 aa15.88■□□□□ 0.13
SCAMP4-206ENST00000460767 RALYLQ86SE5 291 aaKnown RBP15.88■□□□□ 0.13
SCAMP4-206ENST00000460767 SGMS1Q86VZ5 419 aa15.88■□□□□ 0.13
SCAMP4-206ENST00000460767 NEK9Q8TD19 979 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms