RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 TTC38Q5R3I4 469 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 SLFN12Q8IYM2 578 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 RAB34Q9BZG1 259 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 SCAND2PQ9GZW5 306 aaPredicted RBP14.01□□□□□ -0.17
HDAC4-206ENST00000460235 COL20A1Q9P218 1284 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 ZNF236Q9UL36 1845 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 RBBP6Q7Z6E9 1792 aaKnown RBP14.01□□□□□ -0.17
HDAC4-206ENST00000460235 FIBPO43427 364 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 ADCY3O60266 1144 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 HSPA8P11142 646 aaKnown RBP14□□□□□ -0.17
HDAC4-206ENST00000460235 PRKCZQ05513 592 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 TTLL4Q14679 1199 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 Q4G0T1 1027 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 ARMCX2Q7L311 632 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 CTU1Q7Z7A3 348 aaKnown RBP14□□□□□ -0.17
HDAC4-206ENST00000460235 SCFD2Q8WU76 684 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 SHISA4Q96DD7 197 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 FAM20AQ96MK3 541 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 MXRA8Q9BRK3 442 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 JADE2Q9NQC1 790 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 CDKN2AIPQ9NXV6 580 aaPredicted RBP14□□□□□ -0.17
HDAC4-206ENST00000460235 DDX25Q9UHL0 483 aaKnown RBP14□□□□□ -0.17
HDAC4-206ENST00000460235 TSKSQ9UJT2 592 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 STK24Q9Y6E0 443 aa14□□□□□ -0.17
HDAC4-206ENST00000460235 NKRFO15226 690 aaKnown RBP eCLIP13.99□□□□□ -0.17
HDAC4-206ENST00000460235 FOXN1O15353 648 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 NEMFO60524 1076 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 ECM2O94769 699 aaPredicted RBP13.99□□□□□ -0.17
HDAC4-206ENST00000460235 HMGCRP04035 888 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 ATP2B1P20020 1258 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 UBXN2AP68543 259 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 MTMR1Q13613 665 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 NEDD9Q14511 834 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 SF3A1Q15459 793 aaKnown RBP13.99□□□□□ -0.17
HDAC4-206ENST00000460235 TMEM266Q2M3C6 531 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 PRR16Q569H4 304 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 IQSEC1Q6DN90 963 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 OTOP1Q7RTM1 612 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 PLA2G4DQ86XP0 818 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 CRYGNQ8WXF5 182 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 PGBD1Q96JS3 809 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 INPP4AQ96PE3 977 aaPredicted RBP13.99□□□□□ -0.17
HDAC4-206ENST00000460235 GBP4Q96PP9 640 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 SDF4Q9BRK5 362 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 ARHGAP39Q9C0H5 1083 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 PRDM10Q9NQV6 1147 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 TBC1D22BQ9NU19 505 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 POLR3EQ9NVU0 708 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 UBIAD1Q9Y5Z9 338 aa13.99□□□□□ -0.17
HDAC4-206ENST00000460235 KIF28PB7ZC32 967 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 GOLGA6L22H0YM25 854 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 MEIS1O00470 390 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 YEATS4O95619 227 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 CAPN2P17655 700 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 ICAM3P32942 547 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 MCM7P33993 719 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 LBX1P52954 281 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 STK38Q15208 465 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 BRDTQ58F21 947 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-206ENST00000460235 FOXD4L5Q5VV16 416 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-206ENST00000460235 ANO1Q5XXA6 986 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 ARL6IP4Q66PJ3 421 aaKnown RBP13.98□□□□□ -0.17
HDAC4-206ENST00000460235 NPLOC4Q8TAT6 608 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 KCNG4Q8TDN1 519 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 FOXD4L4Q8WXT5 416 aaPredicted RBP13.98□□□□□ -0.17
HDAC4-206ENST00000460235 SENP7Q9BQF6 1050 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 FAM184BQ9ULE4 1060 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 MRVI1Q9Y6F6 885 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 PLXNB2O15031 1838 aa13.98□□□□□ -0.17
HDAC4-206ENST00000460235 SMCHD1A6NHR9 2005 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 MSCO60682 206 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 NCLP19338 710 aaKnown RBP13.97□□□□□ -0.17
HDAC4-206ENST00000460235 CTGFP29279 349 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 GRK4P32298 578 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 PRPHP41219 470 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 ACVR2BQ13705 512 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 CALCRLQ16602 461 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 FERMT2Q96AC1 680 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 MBOAT7Q96N66 472 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 RIT2Q99578 217 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 ZNF577Q9BSK1 485 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 WDR11Q9BZH6 1224 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 SPC25Q9HBM1 224 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 RTEL1Q9NZ71 1219 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 GABRQQ9UN88 632 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 PTPN22Q9Y2R2 807 aa13.97□□□□□ -0.17
HDAC4-206ENST00000460235 MORC2Q9Y6X9 1032 aaPredicted RBP13.97□□□□□ -0.17
HDAC4-206ENST00000460235 ZNFX1Q9P2E3 1918 aaKnown RBP13.96□□□□□ -0.17
HDAC4-206ENST00000460235 MGAMO43451 1857 aa13.96□□□□□ -0.17
HDAC4-206ENST00000460235 SPATA31C2B4DYI2 1134 aa13.96□□□□□ -0.17
HDAC4-206ENST00000460235 MRPS9P82933 396 aaKnown RBP13.96□□□□□ -0.17
HDAC4-206ENST00000460235 PKP1Q13835 747 aa13.96□□□□□ -0.17
HDAC4-206ENST00000460235 ZNF174Q15697 407 aa13.96□□□□□ -0.17
HDAC4-206ENST00000460235 FBXO46Q6PJ61 603 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-206ENST00000460235 SEPT14Q6ZU15 432 aa13.96□□□□□ -0.17
HDAC4-206ENST00000460235 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.96□□□□□ -0.17
HDAC4-206ENST00000460235 KCNH7Q9NS40 1196 aa13.96□□□□□ -0.17
HDAC4-206ENST00000460235 ZHX1Q9UKY1 873 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-206ENST00000460235 Q9Y3F1 56 aa13.96□□□□□ -0.17
HDAC4-206ENST00000460235 NFASCO94856 1347 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms