RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CCDC85BQ15834 202 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-220ENST00000458038 PTGISQ16647 500 aa25.1■■□□□ 1.61
CPNE1-220ENST00000458038 DGKDQ16760 1214 aa25.1■■□□□ 1.61
CPNE1-220ENST00000458038 ARHGEF16Q5VV41 709 aa25.1■■□□□ 1.61
CPNE1-220ENST00000458038 AFAP1L1Q8TED9 768 aa25.1■■□□□ 1.61
CPNE1-220ENST00000458038 EMID1Q96A84 441 aaPredicted RBP25.1■■□□□ 1.61
CPNE1-220ENST00000458038 FTOQ9C0B1 505 aaKnown RBP eCLIP25.1■■□□□ 1.615e-10■□□□□ 9.7
CPNE1-220ENST00000458038 JMJD4Q9H9V9 463 aa25.1■■□□□ 1.61
CPNE1-220ENST00000458038 IGHDP01880 384 aa25.09■■□□□ 1.61
CPNE1-220ENST00000458038 MYOGP15173 224 aa25.09■■□□□ 1.61
CPNE1-220ENST00000458038 POU3F3P20264 500 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-220ENST00000458038 ARHGAP1Q07960 439 aa25.09■■□□□ 1.61
CPNE1-220ENST00000458038 TRAF1Q13077 416 aa25.09■■□□□ 1.61
CPNE1-220ENST00000458038 LY6KQ17RY6 165 aa25.09■■□□□ 1.61
CPNE1-220ENST00000458038 AMNQ9BXJ7 453 aa25.09■■□□□ 1.61
CPNE1-220ENST00000458038 MYH7BA7E2Y1 1941 aa25.08■■□□□ 1.61
CPNE1-220ENST00000458038 PRRC2BQ5JSZ5 2229 aaKnown RBP25.08■■□□□ 1.61
CPNE1-220ENST00000458038 IFIT1BQ5T764 474 aaKnown RBP25.08■■□□□ 1.61
CPNE1-220ENST00000458038 IL27Q8NEV9 243 aa25.08■■□□□ 1.61
CPNE1-220ENST00000458038 KATNAL1Q9BW62 490 aa25.08■■□□□ 1.61
CPNE1-220ENST00000458038 VAT1LQ9HCJ6 419 aa25.08■■□□□ 1.61
CPNE1-220ENST00000458038 COL20A1Q9P218 1284 aa25.08■■□□□ 1.61
CPNE1-220ENST00000458038 REV3LO60673 3130 aa25.08■■□□□ 1.6
CPNE1-220ENST00000458038 NR3C2P08235 984 aa25.07■■□□□ 1.6
CPNE1-220ENST00000458038 HSD17B4P51659 736 aa25.07■■□□□ 1.6
CPNE1-220ENST00000458038 GHRHRQ02643 423 aa25.07■■□□□ 1.6
CPNE1-220ENST00000458038 LAMC2Q13753 1193 aa25.07■■□□□ 1.6
CPNE1-220ENST00000458038 KCNV1Q6PIU1 500 aa25.07■■□□□ 1.6
CPNE1-220ENST00000458038 DDX41Q9UJV9 622 aaKnown RBP25.07■■□□□ 1.6
CPNE1-220ENST00000458038 GTPBP6O43824 516 aaPredicted RBP25.06■■□□□ 1.6
CPNE1-220ENST00000458038 CA3P07451 260 aa25.06■■□□□ 1.6
CPNE1-220ENST00000458038 CHMP4BP1P59074 171 aa25.06■■□□□ 1.6
CPNE1-220ENST00000458038 RBL2Q08999 1139 aa25.06■■□□□ 1.6
CPNE1-220ENST00000458038 PXMP2Q9NR77 195 aa25.06■■□□□ 1.6
CPNE1-220ENST00000458038 CFBP00751 764 aa25.05■■□□□ 1.6
CPNE1-220ENST00000458038 SELPP16109 830 aa25.05■■□□□ 1.6
CPNE1-220ENST00000458038 EIF2AK2P19525 551 aaKnown RBP25.05■■□□□ 1.6
CPNE1-220ENST00000458038 AAK1Q2M2I8 961 aa25.05■■□□□ 1.6
CPNE1-220ENST00000458038 GDF6Q6KF10 455 aaPredicted RBP25.05■■□□□ 1.6
CPNE1-220ENST00000458038 CHST3Q7LGC8 479 aa25.05■■□□□ 1.6
CPNE1-220ENST00000458038 HERC6Q8IVU3 1022 aa25.05■■□□□ 1.6
CPNE1-220ENST00000458038 PPTC7Q8NI37 304 aa25.05■■□□□ 1.6
CPNE1-220ENST00000458038 KAT2BQ92831 832 aa25.05■■□□□ 1.6
CPNE1-220ENST00000458038 MRVI1Q9Y6F6 885 aa25.05■■□□□ 1.6
CPNE1-220ENST00000458038 KLRF2D3W0D1 207 aa25.04■■□□□ 1.6
CPNE1-220ENST00000458038 ZBTB5O15062 677 aa25.04■■□□□ 1.6
CPNE1-220ENST00000458038 KCNJ6P48051 423 aa25.04■■□□□ 1.6
CPNE1-220ENST00000458038 TRDNQ13061 729 aa25.04■■□□□ 1.6
CPNE1-220ENST00000458038 STOX1Q6ZVD7 989 aa25.04■■□□□ 1.6
CPNE1-220ENST00000458038 DHX37Q8IY37 1157 aaKnown RBP25.04■■□□□ 1.6
CPNE1-220ENST00000458038 C7orf31Q8N865 590 aa25.04■■□□□ 1.6
CPNE1-220ENST00000458038 MTMR8Q96EF0 704 aa25.04■■□□□ 1.6
CPNE1-220ENST00000458038 GTF2IRD1Q9UHL9 959 aa25.04■■□□□ 1.6
CPNE1-220ENST00000458038 SEC23AQ15436 765 aa25.03■■□□□ 1.6
CPNE1-220ENST00000458038 ADAMTS19Q8TE59 1207 aa25.03■■□□□ 1.6
CPNE1-220ENST00000458038 PPP1R13LQ8WUF5 828 aa25.03■■□□□ 1.6
CPNE1-220ENST00000458038 EFCAB14O75071 495 aa25.02■■□□□ 1.6
CPNE1-220ENST00000458038 PPFIA4O75335 1185 aa25.02■■□□□ 1.6
CPNE1-220ENST00000458038 TGFB3P10600 412 aa25.02■■□□□ 1.6
CPNE1-220ENST00000458038 PSEN2P49810 448 aa25.02■■□□□ 1.6
CPNE1-220ENST00000458038 LRRC8DQ7L1W4 858 aa25.02■■□□□ 1.6
CPNE1-220ENST00000458038 STAG2Q8N3U4 1231 aa25.02■■□□□ 1.6
CPNE1-220ENST00000458038 CTAGE1Q96RT6 745 aa25.02■■□□□ 1.6
CPNE1-220ENST00000458038 PCDHA1Q9Y5I3 950 aa25.02■■□□□ 1.6
CPNE1-220ENST00000458038 PALM3A6NDB9 673 aaPredicted RBP25.01■■□□□ 1.59
CPNE1-220ENST00000458038 OPLAHO14841 1288 aa25.01■■□□□ 1.59
CPNE1-220ENST00000458038 F2P00734 622 aa25.01■■□□□ 1.59
CPNE1-220ENST00000458038 HOXD8P13378 290 aaPredicted RBP25.01■■□□□ 1.59
CPNE1-220ENST00000458038 TAP1Q03518 808 aa25.01■■□□□ 1.59
CPNE1-220ENST00000458038 PTK7Q13308 1070 aa25.01■■□□□ 1.59
CPNE1-220ENST00000458038 CNKSR3Q6P9H4 555 aa25.01■■□□□ 1.59
CPNE1-220ENST00000458038 RUFY2Q8WXA3 655 aa25.01■■□□□ 1.59
CPNE1-220ENST00000458038 UHRF1Q96T88 793 aaPredicted RBP25.01■■□□□ 1.59
CPNE1-220ENST00000458038 PDCD2LQ9BRP1 358 aa25.01■■□□□ 1.59
CPNE1-220ENST00000458038 HDAC6Q9UBN7 1215 aa25.01■■□□□ 1.59
CPNE1-220ENST00000458038 MAD2L2Q9UI95 211 aa25.01■■□□□ 1.59
CPNE1-220ENST00000458038 MTCH2Q9Y6C9 303 aa25.01■■□□□ 1.59
CPNE1-220ENST00000458038 BAZ2BQ9UIF8 2168 aaKnown RBP25.01■■□□□ 1.59
CPNE1-220ENST00000458038 XIRP2A4UGR9 3374 aa25■■□□□ 1.59
CPNE1-220ENST00000458038 HAS3O00219 553 aa25■■□□□ 1.59
CPNE1-220ENST00000458038 TLL1O43897 1013 aa25■■□□□ 1.59
CPNE1-220ENST00000458038 CXCL10P02778 98 aa25■■□□□ 1.59
CPNE1-220ENST00000458038 CKBP12277 381 aa25■■□□□ 1.59
CPNE1-220ENST00000458038 MFSD10Q14728 455 aa25■■□□□ 1.59
CPNE1-220ENST00000458038 VSIG10LQ86VR7 867 aa25■■□□□ 1.59
CPNE1-220ENST00000458038 MICALL1Q8N3F8 863 aa25■■□□□ 1.59
CPNE1-220ENST00000458038 EXOC6Q8TAG9 804 aa25■■□□□ 1.59
CPNE1-220ENST00000458038 U3KPZ7 1027 aaPredicted RBP25■■□□□ 1.59
CPNE1-220ENST00000458038 ABHD14A-ACY1A0A1B0GW23 586 aa24.99■■□□□ 1.59
CPNE1-220ENST00000458038 KIAA0753Q2KHM9 967 aa24.99■■□□□ 1.59
CPNE1-220ENST00000458038 MYSM1Q5VVJ2 828 aa24.99■■□□□ 1.59
CPNE1-220ENST00000458038 DHX38Q92620 1227 aaKnown RBP24.99■■□□□ 1.59
CPNE1-220ENST00000458038 COG5Q9UP83 839 aa24.99■■□□□ 1.59
CPNE1-220ENST00000458038 ERICH2A1L162 156 aa24.98■■□□□ 1.59
CPNE1-220ENST00000458038 MYCLP12524 364 aaPredicted RBP24.98■■□□□ 1.59
CPNE1-220ENST00000458038 WDR5P61964 334 aaKnown RBP24.98■■□□□ 1.59
CPNE1-220ENST00000458038 SKIV2LQ15477 1246 aaKnown RBP24.98■■□□□ 1.59
CPNE1-220ENST00000458038 CELF3Q5SZQ8 465 aaKnown RBP24.98■■□□□ 1.59
CPNE1-220ENST00000458038 CYB5R4Q7L1T6 521 aa24.98■■□□□ 1.59
CPNE1-220ENST00000458038 ALG1Q9BT22 464 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms