RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 HYOU1Q9Y4L1 999 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 PLEKHG2Q9H7P9 1386 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 CCDC151A5D8V7 595 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 GRM1Q13255 1194 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 ALS2CR12Q96Q35 445 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 PANX2Q96RD6 677 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 NHEJ1Q9H9Q4 299 aaPredicted RBP12.37□□□□□ -0.43
DDR1-239ENST00000452441 PDE4DIPQ5VU43 2346 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 USP17L10C9JJH3 530 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 H7C1D1 291 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 ATP8B1O43520 1251 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 EHHADHQ08426 723 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 NT5DC1Q5TFE4 455 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 PRAMEF18Q5VWM3 479 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 SHISA4Q96DD7 197 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 ADAM21Q9UKJ8 722 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 DAGLAQ9Y4D2 1042 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 PCDHAC2Q9Y5I4 1007 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 TLDC2A0PJX2 215 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 H3BQF6 201 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 MYCLP12524 364 aaPredicted RBP12.37□□□□□ -0.43
DDR1-239ENST00000452441 RASA1P20936 1047 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 PDE6BP35913 854 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 ATP2C1P98194 919 aaPredicted RBP12.37□□□□□ -0.43
DDR1-239ENST00000452441 DEFB132Q7Z7B7 95 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 ZNF579Q8NAF0 562 aaKnown RBP12.37□□□□□ -0.43
DDR1-239ENST00000452441 ECM29Q5VYK3 1845 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 FLT1P17948 1338 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 EIF4A3P38919 411 aaKnown RBP12.36□□□□□ -0.43
DDR1-239ENST00000452441 SEPT2Q15019 361 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 DLGAP5Q15398 846 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 ARHGAP44Q17R89 818 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 RNF187Q5TA31 235 aaPredicted RBP12.36□□□□□ -0.43
DDR1-239ENST00000452441 FAM114A1Q8IWE2 563 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 TPH2Q8IWU9 490 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 MB21D1Q8N884 522 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 PNKPQ96T60 521 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 LSM14BQ9BX40 385 aaKnown RBP12.36□□□□□ -0.43
DDR1-239ENST00000452441 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
DDR1-239ENST00000452441 ADAMTS1Q9UHI8 967 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 PCDHA6Q9UN73 950 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 PCDHA8Q9Y5H6 950 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 BICDL2A1A5D9 508 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 LONP1P36776 959 aaKnown RBP12.36□□□□□ -0.43
DDR1-239ENST00000452441 NFIAQ12857 509 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 GPBP1Q86WP2 473 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 P2RX5Q93086 422 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 GBP3Q9H0R5 595 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 TBCAO75347 108 aaKnown RBP12.36□□□□□ -0.43
DDR1-239ENST00000452441 GFPT1Q06210 699 aaPredicted RBP12.36□□□□□ -0.43
DDR1-239ENST00000452441 CNNM4Q6P4Q7 775 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 GLIS3Q8NEA6 775 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 IL17RBQ9NRM6 502 aa12.36□□□□□ -0.43
DDR1-239ENST00000452441 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDR1-239ENST00000452441 CNTNAP4Q9C0A0 1308 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 ITGB4P16144 1822 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 ABCA3Q99758 1704 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 TTLL1O95922 423 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 PCP11498 1178 aaKnown RBP12.35□□□□□ -0.43
DDR1-239ENST00000452441 BRD3Q15059 726 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 NAA15Q9BXJ9 866 aaKnown RBP12.35□□□□□ -0.43
DDR1-239ENST00000452441 DDX25Q9UHL0 483 aaKnown RBP12.35□□□□□ -0.43
DDR1-239ENST00000452441 ORC4O43929 436 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 GJC1P36383 396 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 IL17AQ16552 155 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 RC3H1Q5TC82 1133 aaKnown RBP12.35□□□□□ -0.43
DDR1-239ENST00000452441 PIGOQ8TEQ8 1089 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 MS4A14Q96JA4 679 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 FAM204AQ9H8W3 233 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 RWDD2AQ9UIY3 292 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 ATRNO75882 1429 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 GCNT3O95395 438 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 GH2P01242 217 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 DNM2P50570 870 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 NFRKBQ6P4R8 1299 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 FAM133AQ8N9E0 248 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 LARP4BQ92615 738 aaKnown RBP12.35□□□□□ -0.43
DDR1-239ENST00000452441 DDX12PQ92771 950 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 LACRTQ9GZZ8 138 aa12.35□□□□□ -0.43
DDR1-239ENST00000452441 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.35□□□□□ -0.43
DDR1-239ENST00000452441 CRKP46108 304 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 MAP9Q49MG5 647 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 ZNF384Q8TF68 577 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 ANKZF1Q9H8Y5 726 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 ZNF408Q9H9D4 720 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 CYTH3O43739 400 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 CEP104O60308 925 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 HARSP12081 509 aaKnown RBP12.34□□□□□ -0.43
DDR1-239ENST00000452441 CYP2J2P51589 502 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 CASP8Q14790 479 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 ABCB5Q2M3G0 1257 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 PHLDB2Q86SQ0 1253 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 TMEM51Q9NW97 253 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 HDAC9Q9UKV0 1011 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 LRP6O75581 1613 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 MYH8P13535 1937 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 POTEB3A0JP26 581 aa12.34□□□□□ -0.43
DDR1-239ENST00000452441 POTECB2RU33 542 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms