RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 PCNX4Q63HM2 1172 aa16.49■□□□□ 0.23
COL3A1-203ENST00000450867 CCSAPQ6IQ19 270 aaPredicted RBP16.49■□□□□ 0.23
COL3A1-203ENST00000450867 FCHSD1Q86WN1 690 aa16.49■□□□□ 0.23
COL3A1-203ENST00000450867 CCDC148Q8NFR7 591 aa16.49■□□□□ 0.23
COL3A1-203ENST00000450867 PAWRQ96IZ0 340 aaKnown RBP16.49■□□□□ 0.23
COL3A1-203ENST00000450867 TSEN34Q9BSV6 310 aaKnown RBP16.49■□□□□ 0.23
COL3A1-203ENST00000450867 WDR11Q9BZH6 1224 aa16.49■□□□□ 0.23
COL3A1-203ENST00000450867 SCN10AQ9Y5Y9 1956 aa16.48■□□□□ 0.23
COL3A1-203ENST00000450867 SMCO2A6NFE2 343 aa16.48■□□□□ 0.23
COL3A1-203ENST00000450867 ST3GAL1Q11201 340 aa16.48■□□□□ 0.23
COL3A1-203ENST00000450867 AP3B2Q13367 1082 aa16.48■□□□□ 0.23
COL3A1-203ENST00000450867 UBE2SQ16763 222 aa16.48■□□□□ 0.23
COL3A1-203ENST00000450867 MCTP2Q6DN12 878 aa16.48■□□□□ 0.23
COL3A1-203ENST00000450867 RNF180Q86T96 592 aa16.48■□□□□ 0.23
COL3A1-203ENST00000450867 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
COL3A1-203ENST00000450867 INPP4AQ96PE3 977 aaPredicted RBP16.48■□□□□ 0.23
COL3A1-203ENST00000450867 PHF24Q9UPV7 400 aa16.48■□□□□ 0.23
COL3A1-203ENST00000450867 KBTBD13C9JR72 458 aa16.47■□□□□ 0.23
COL3A1-203ENST00000450867 PGK1P00558 417 aa16.47■□□□□ 0.23
COL3A1-203ENST00000450867 MRPS9P82933 396 aaKnown RBP16.47■□□□□ 0.23
COL3A1-203ENST00000450867 TTLL4Q14679 1199 aa16.47■□□□□ 0.23
COL3A1-203ENST00000450867 TMEM63BQ5T3F8 832 aa16.47■□□□□ 0.23
COL3A1-203ENST00000450867 GJC2Q5T442 439 aaPredicted RBP16.47■□□□□ 0.23
COL3A1-203ENST00000450867 KCNV1Q6PIU1 500 aa16.47■□□□□ 0.23
COL3A1-203ENST00000450867 TLK2Q86UE8 772 aa16.47■□□□□ 0.23
COL3A1-203ENST00000450867 C11orf49Q9H6J7 331 aa16.47■□□□□ 0.23
COL3A1-203ENST00000450867 C6orf50Q9HD87 102 aa16.47■□□□□ 0.23
COL3A1-203ENST00000450867 SH2B1Q9NRF2 756 aaPredicted RBP16.47■□□□□ 0.23
COL3A1-203ENST00000450867 MOXD2PA6NHM9 499 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 SPDYE3A6NKU9 549 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 ARIH2O95376 493 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 TGFB3P10600 412 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 GNA11P29992 359 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 ICAM3P32942 547 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 NOL8Q76FK4 1167 aaKnown RBP16.46■□□□□ 0.23
COL3A1-203ENST00000450867 NECAB1Q8N987 351 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 DAGLBQ8NCG7 672 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 NSUN7Q8NE18 718 aaKnown RBP16.46■□□□□ 0.23
COL3A1-203ENST00000450867 BICD2Q8TD16 824 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 CRYGNQ8WXF5 182 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 EMID1Q96A84 441 aaPredicted RBP16.46■□□□□ 0.23
COL3A1-203ENST00000450867 SPC25Q9HBM1 224 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 VPS54Q9P1Q0 977 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 PCDHA6Q9UN73 950 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 PCDHA8Q9Y5H6 950 aa16.46■□□□□ 0.23
COL3A1-203ENST00000450867 MYADML2A6NDP7 307 aa16.45■□□□□ 0.22
COL3A1-203ENST00000450867 ST18O60284 1047 aa16.45■□□□□ 0.22
COL3A1-203ENST00000450867 PPFIA3O75145 1194 aa16.45■□□□□ 0.22
COL3A1-203ENST00000450867 TXNP10599 105 aaKnown RBP16.45■□□□□ 0.22
COL3A1-203ENST00000450867 MYCLP12524 364 aaPredicted RBP16.45■□□□□ 0.22
COL3A1-203ENST00000450867 FDPSP14324 419 aaKnown RBP16.45■□□□□ 0.22
COL3A1-203ENST00000450867 SREBF1P36956 1147 aa16.45■□□□□ 0.22
COL3A1-203ENST00000450867 SNX17Q15036 470 aa16.45■□□□□ 0.22
COL3A1-203ENST00000450867 NPY5RQ15761 445 aa16.45■□□□□ 0.22
COL3A1-203ENST00000450867 GALNT17Q6IS24 598 aa16.45■□□□□ 0.22
COL3A1-203ENST00000450867 REXO1Q8N1G1 1221 aaKnown RBP16.45■□□□□ 0.22
COL3A1-203ENST00000450867 PCSK9Q8NBP7 692 aaKnown RBP16.45■□□□□ 0.22
COL3A1-203ENST00000450867 LLPHQ9BRT6 129 aaKnown RBP16.45■□□□□ 0.22
COL3A1-203ENST00000450867 HTATIP2Q9BUP3 242 aa16.45■□□□□ 0.22
COL3A1-203ENST00000450867 ANO3Q9BYT9 981 aa16.45■□□□□ 0.22
COL3A1-203ENST00000450867 EHMT1Q9H9B1 1298 aa16.45■□□□□ 0.22
COL3A1-203ENST00000450867 DDX41Q9UJV9 622 aaKnown RBP16.45■□□□□ 0.22
COL3A1-203ENST00000450867 A6NJR5 290 aa16.44■□□□□ 0.22
COL3A1-203ENST00000450867 ADAMTS3O15072 1205 aa16.44■□□□□ 0.22
COL3A1-203ENST00000450867 C6orf222P0C671 652 aaPredicted RBP16.44■□□□□ 0.22
COL3A1-203ENST00000450867 ARHGAP1Q07960 439 aa16.44■□□□□ 0.22
COL3A1-203ENST00000450867 GNPTABQ3T906 1256 aa16.44■□□□□ 0.22
COL3A1-203ENST00000450867 C1orf53Q5VUE5 145 aa16.44■□□□□ 0.22
COL3A1-203ENST00000450867 SEPT14Q6ZU15 432 aa16.44■□□□□ 0.22
COL3A1-203ENST00000450867 WASF1Q92558 559 aa16.44■□□□□ 0.22
COL3A1-203ENST00000450867 AIFM3Q96NN9 605 aa16.44■□□□□ 0.22
COL3A1-203ENST00000450867 AP5M1Q9H0R1 490 aa16.44■□□□□ 0.22
COL3A1-203ENST00000450867 UBIAD1Q9Y5Z9 338 aa16.44■□□□□ 0.22
COL3A1-203ENST00000450867 SPATA31C2B4DYI2 1134 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 M0R2N6 131 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 DYNC1LI2O43237 492 aaPredicted RBP16.43■□□□□ 0.22
COL3A1-203ENST00000450867 CYP3A4P08684 503 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 MCM2P49736 904 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 ACLYP53396 1101 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 IRX5P78411 483 aaPredicted RBP16.43■□□□□ 0.22
COL3A1-203ENST00000450867 SEMA3FQ13275 785 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 KCNA10Q16322 511 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 FSCN1Q16658 493 aaKnown RBP16.43■□□□□ 0.22
COL3A1-203ENST00000450867 GNASQ5JWF2 1037 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 GPRASP2Q96D09 838 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 PHF20Q9BVI0 1012 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 ORC3Q9UBD5 711 aaPredicted RBP16.43■□□□□ 0.22
COL3A1-203ENST00000450867 PCDHA4Q9UN74 947 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 MRVI1Q9Y6F6 885 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 WDR81Q562E7 1941 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 ELP1O95163 1332 aa16.43■□□□□ 0.22
COL3A1-203ENST00000450867 A0A1W2PQ45 241 aaPredicted RBP16.42■□□□□ 0.22
COL3A1-203ENST00000450867 A0A1W2PQY0 241 aa16.42■□□□□ 0.22
COL3A1-203ENST00000450867 FIBPO43427 364 aa16.42■□□□□ 0.22
COL3A1-203ENST00000450867 CD2BP2O95400 341 aaKnown RBP16.42■□□□□ 0.22
COL3A1-203ENST00000450867 GH1P01241 217 aa16.42■□□□□ 0.22
COL3A1-203ENST00000450867 ASGR1P07306 291 aa16.42■□□□□ 0.22
COL3A1-203ENST00000450867 HOXD8P13378 290 aaPredicted RBP16.42■□□□□ 0.22
COL3A1-203ENST00000450867 PTGS1P23219 599 aa16.42■□□□□ 0.22
COL3A1-203ENST00000450867 CPT1AP50416 773 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms