RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 NFRKBQ6P4R8 1299 aa22.78■■□□□ 1.24
VCP-203ENST00000448530 FCHSD1Q86WN1 690 aa22.78■■□□□ 1.24
VCP-203ENST00000448530 NOC4LQ9BVI4 516 aaKnown RBP22.78■■□□□ 1.24
VCP-203ENST00000448530 MTIF3Q9H2K0 278 aaKnown RBP22.78■■□□□ 1.24
VCP-203ENST00000448530 IL23AQ9NPF7 189 aa22.78■■□□□ 1.24
VCP-203ENST00000448530 TRMT13Q9NUP7 481 aaKnown RBP22.78■■□□□ 1.24
VCP-203ENST00000448530 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.77■■□□□ 1.24
VCP-203ENST00000448530 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.77■■□□□ 1.24
VCP-203ENST00000448530 CDC45O75419 566 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 ACRP10323 421 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 SMARCA1P28370 1054 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 CCND2P30279 289 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 LIFRP42702 1097 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 CCL23P55773 120 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 ARHGAP1Q07960 439 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 TMEM240Q5SV17 173 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 KCNV1Q6PIU1 500 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 ZNF365Q70YC5 407 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 DDX41Q9UJV9 622 aaKnown RBP22.77■■□□□ 1.24
VCP-203ENST00000448530 NOD1Q9Y239 953 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 SLC12A7Q9Y666 1083 aa22.77■■□□□ 1.24
VCP-203ENST00000448530 MYH7BA7E2Y1 1941 aa22.76■■□□□ 1.23
VCP-203ENST00000448530 MMP3P08254 477 aa22.76■■□□□ 1.23
VCP-203ENST00000448530 CASTP20810 708 aaKnown RBP22.76■■□□□ 1.23
VCP-203ENST00000448530 PTPN11Q06124 597 aaPredicted RBP22.76■■□□□ 1.23
VCP-203ENST00000448530 LAMC2Q13753 1193 aa22.76■■□□□ 1.23
VCP-203ENST00000448530 PGM5Q15124 567 aa22.76■■□□□ 1.23
VCP-203ENST00000448530 SYNE3Q6ZMZ3 975 aa22.76■■□□□ 1.23
VCP-203ENST00000448530 C16orf59Q7L2K0 433 aa22.76■■□□□ 1.23
VCP-203ENST00000448530 VSIG10LQ86VR7 867 aa22.76■■□□□ 1.23
VCP-203ENST00000448530 DHX37Q8IY37 1157 aaKnown RBP22.76■■□□□ 1.23
VCP-203ENST00000448530 CUL5Q93034 780 aa22.76■■□□□ 1.23
VCP-203ENST00000448530 UMODL1Q5DID0 1318 aa22.76■■□□□ 1.23
VCP-203ENST00000448530 FGBP02675 491 aa22.75■■□□□ 1.23
VCP-203ENST00000448530 CYP2C9P11712 490 aa22.75■■□□□ 1.23
VCP-203ENST00000448530 DGKDQ16760 1214 aa22.75■■□□□ 1.23
VCP-203ENST00000448530 RPUSD2Q8IZ73 545 aaKnown RBP22.75■■□□□ 1.23
VCP-203ENST00000448530 SLC17A8Q8NDX2 589 aa22.74■■□□□ 1.23
VCP-203ENST00000448530 EMID1Q96A84 441 aaPredicted RBP22.74■■□□□ 1.23
VCP-203ENST00000448530 LRRC2Q9BYS8 371 aa22.74■■□□□ 1.23
VCP-203ENST00000448530 SEMA6BQ9H3T3 888 aa22.74■■□□□ 1.23
VCP-203ENST00000448530 PLEKHA8P1O95397 391 aa22.73■■□□□ 1.23
VCP-203ENST00000448530 RXRAP19793 462 aa22.73■■□□□ 1.23
VCP-203ENST00000448530 RETREG2Q8NC44 543 aa22.73■■□□□ 1.23
VCP-203ENST00000448530 IL31RAQ8NI17 732 aa22.73■■□□□ 1.23
VCP-203ENST00000448530 PPTC7Q8NI37 304 aa22.73■■□□□ 1.23
VCP-203ENST00000448530 SMARCC2Q8TAQ2 1214 aa22.73■■□□□ 1.23
VCP-203ENST00000448530 PPP1R13LQ8WUF5 828 aa22.73■■□□□ 1.23
VCP-203ENST00000448530 GUCD1Q96NT3 240 aa22.73■■□□□ 1.23
VCP-203ENST00000448530 NEK1Q96PY6 1258 aa22.73■■□□□ 1.23
VCP-203ENST00000448530 WNT8AQ9H1J5 351 aa22.73■■□□□ 1.23
VCP-203ENST00000448530 TMEM265A0A087WTH1 108 aa22.72■■□□□ 1.23
VCP-203ENST00000448530 TGFB3P10600 412 aa22.72■■□□□ 1.23
VCP-203ENST00000448530 KRT32Q14532 448 aa22.72■■□□□ 1.23
VCP-203ENST00000448530 GNPTABQ3T906 1256 aa22.72■■□□□ 1.23
VCP-203ENST00000448530 SRBD1Q8N5C6 995 aaKnown RBP22.72■■□□□ 1.23
VCP-203ENST00000448530 HERVK_113Q902F9 699 aa22.72■■□□□ 1.23
VCP-203ENST00000448530 KATNAL1Q9BW62 490 aa22.72■■□□□ 1.23
VCP-203ENST00000448530 STAM2O75886 525 aa22.71■■□□□ 1.23
VCP-203ENST00000448530 RGS20O76081 388 aa22.71■■□□□ 1.23
VCP-203ENST00000448530 DNAJB2P25686 324 aa22.71■■□□□ 1.23
VCP-203ENST00000448530 BFSP2Q13515 415 aa22.71■■□□□ 1.23
VCP-203ENST00000448530 SGMS1Q86VZ5 419 aa22.71■■□□□ 1.23
VCP-203ENST00000448530 MICU3Q86XE3 530 aa22.71■■□□□ 1.23
VCP-203ENST00000448530 RAB11FIP4Q86YS3 637 aa22.71■■□□□ 1.23
VCP-203ENST00000448530 FANCBQ8NB91 859 aa22.71■■□□□ 1.23
VCP-203ENST00000448530 SCLYQ96I15 445 aa22.71■■□□□ 1.23
VCP-203ENST00000448530 SPATA33Q96N06 139 aa22.71■■□□□ 1.23
VCP-203ENST00000448530 GGPS1O95749 300 aa22.7■■□□□ 1.22
VCP-203ENST00000448530 COL9A3Q14050 684 aaPredicted RBP22.7■■□□□ 1.22
VCP-203ENST00000448530 PTGISQ16647 500 aa22.7■■□□□ 1.22
VCP-203ENST00000448530 CELF3Q5SZQ8 465 aaKnown RBP22.7■■□□□ 1.22
VCP-203ENST00000448530 RASIP1Q5U651 963 aa22.7■■□□□ 1.22
VCP-203ENST00000448530 OTOP2Q7RTS6 562 aa22.7■■□□□ 1.22
VCP-203ENST00000448530 CMTR1Q8N1G2 835 aaKnown RBP22.7■■□□□ 1.22
VCP-203ENST00000448530 CCDC82Q8N4S0 544 aa22.7■■□□□ 1.22
VCP-203ENST00000448530 CCDC155Q8N6L0 562 aa22.7■■□□□ 1.22
VCP-203ENST00000448530 C7orf31Q8N865 590 aa22.7■■□□□ 1.22
VCP-203ENST00000448530 ZFP91Q96JP5 570 aaPredicted RBP22.7■■□□□ 1.22
VCP-203ENST00000448530 CDX2Q99626 313 aaPredicted RBP22.7■■□□□ 1.22
VCP-203ENST00000448530 TTYH1Q9H313 450 aaPredicted RBP22.7■■□□□ 1.22
VCP-203ENST00000448530 MLXIPQ9HAP2 919 aa22.7■■□□□ 1.22
VCP-203ENST00000448530 SORBS3O60504 671 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 NEFLP07196 543 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 PFKMP08237 780 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 MYSM1Q5VVJ2 828 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 USP17L6PQ6QN14 398 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 DHX32Q7L7V1 743 aaKnown RBP22.69■■□□□ 1.22
VCP-203ENST00000448530 SESTD1Q86VW0 696 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 KAT2BQ92831 832 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 TIFAQ96CG3 184 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 ALG1Q9BT22 464 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 PSTPIP2Q9H939 334 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 COL6A3P12111 3177 aa22.69■■□□□ 1.22
VCP-203ENST00000448530 FRMPD4Q14CM0 1322 aa22.68■■□□□ 1.22
VCP-203ENST00000448530 PIK3CDO00329 1044 aa22.68■■□□□ 1.22
VCP-203ENST00000448530 PITPNM1O00562 1244 aa22.68■■□□□ 1.22
VCP-203ENST00000448530 PPFIA4O75335 1185 aa22.68■■□□□ 1.22
VCP-203ENST00000448530 HMGB1P09429 215 aaKnown RBP22.68■■□□□ 1.22
VCP-203ENST00000448530 ZNF286BP0CG31 522 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms