RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 MOXD1Q6UVY6 613 aa28.11■■■□□ 2.09
RFFL-206ENST00000447669 ABT1Q9ULW3 272 aaKnown RBP28.11■■■□□ 2.09
RFFL-206ENST00000447669 MYCLP12524 364 aaPredicted RBP28.11■■■□□ 2.09
RFFL-206ENST00000447669 MRPS9P82933 396 aaKnown RBP28.11■■■□□ 2.09
RFFL-206ENST00000447669 CNTN2Q02246 1040 aa28.11■■■□□ 2.09
RFFL-206ENST00000447669 PGM5Q15124 567 aa28.11■■■□□ 2.09
RFFL-206ENST00000447669 TKFCQ3LXA3 575 aa28.11■■■□□ 2.09
RFFL-206ENST00000447669 ANKRD13CQ8N6S4 541 aa28.11■■■□□ 2.09
RFFL-206ENST00000447669 PXMP2Q9NR77 195 aa28.11■■■□□ 2.09
RFFL-206ENST00000447669 ITGB5P18084 799 aa28.1■■■□□ 2.09
RFFL-206ENST00000447669 GRM1Q13255 1194 aa28.1■■■□□ 2.09
RFFL-206ENST00000447669 ARHGEF16Q5VV41 709 aa28.1■■■□□ 2.09
RFFL-206ENST00000447669 LRSAM1Q6UWE0 723 aa28.1■■■□□ 2.09
RFFL-206ENST00000447669 KRBA2Q6ZNG9 492 aa28.1■■■□□ 2.09
RFFL-206ENST00000447669 ANKRD23Q86SG2 305 aa28.1■■■□□ 2.09
RFFL-206ENST00000447669 ANKRD35Q8N283 1001 aa28.1■■■□□ 2.09
RFFL-206ENST00000447669 IGSF22Q8N9C0 903 aa28.1■■■□□ 2.09
RFFL-206ENST00000447669 NAP1L4Q99733 375 aaKnown RBP28.1■■■□□ 2.09
RFFL-206ENST00000447669 EHMT1Q9H9B1 1298 aa28.1■■■□□ 2.09
RFFL-206ENST00000447669 RABGAP1Q9Y3P9 1069 aa28.1■■■□□ 2.09
RFFL-206ENST00000447669 ARP10275 920 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 PLA2G4DQ86XP0 818 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 TEX2Q8IWB9 1127 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 CNNM3Q8NE01 707 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 CHST13Q8NET6 341 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 NUDT12Q9BQG2 462 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 MMTAG2Q9BU76 263 aaKnown RBP28.09■■■□□ 2.09
RFFL-206ENST00000447669 MAP3K20Q9NYL2 800 aaKnown RBP28.09■■■□□ 2.09
RFFL-206ENST00000447669 PNMA3Q9UL41 463 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 PCDHA12Q9UN75 941 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 ACTN4O43707 911 aaKnown RBP28.09■■■□□ 2.09
RFFL-206ENST00000447669 ERVK-9P63128 1117 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 ERVK-24P63145 666 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 CEP55Q53EZ4 464 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 WDR78Q5VTH9 848 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 LRRC15Q8TF66 581 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 STAMQ92783 540 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 PDCD2LQ9BRP1 358 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 WDR11Q9BZH6 1224 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 PORCNQ9H237 461 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 TLL2Q9Y6L7 1015 aa28.09■■■□□ 2.09
RFFL-206ENST00000447669 FXR2P51116 673 aaKnown RBP eCLIP28.08■■■□□ 2.09
RFFL-206ENST00000447669 PNOCQ13519 176 aa28.08■■■□□ 2.09
RFFL-206ENST00000447669 ZIC5Q96T25 663 aa28.08■■■□□ 2.09
RFFL-206ENST00000447669 PKD2L1Q9P0L9 805 aa28.08■■■□□ 2.09
RFFL-206ENST00000447669 LRWD1Q9UFC0 647 aa28.08■■■□□ 2.09
RFFL-206ENST00000447669 ASTN1O14525 1302 aa28.08■■■□□ 2.09
RFFL-206ENST00000447669 IGF2BP3O00425 579 aaKnown RBP eCLIP28.08■■■□□ 2.08
RFFL-206ENST00000447669 UBA7P41226 1012 aa28.08■■■□□ 2.08
RFFL-206ENST00000447669 FSTL1Q12841 308 aa28.08■■■□□ 2.08
RFFL-206ENST00000447669 RBM43Q6ZSC3 357 aaKnown RBP28.08■■■□□ 2.08
RFFL-206ENST00000447669 ECM2O94769 699 aaPredicted RBP28.07■■■□□ 2.08
RFFL-206ENST00000447669 MXRA8Q9BRK3 442 aa28.07■■■□□ 2.08
RFFL-206ENST00000447669 EFCC1Q9HA90 598 aa28.07■■■□□ 2.08
RFFL-206ENST00000447669 FRMPD4Q14CM0 1322 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 TOMM70O94826 608 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 PRR29P0C7W0 189 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 CASP1P29466 404 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 TMEM266Q2M3C6 531 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 CABP7Q86V35 215 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 SAMD3Q8N6K7 520 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 FUCA2Q9BTY2 467 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 FAM155AB1AL88 458 aaPredicted RBP28.06■■■□□ 2.08
RFFL-206ENST00000447669 MEIS1O00470 390 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 PGK2P07205 417 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 E2F4Q16254 413 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 PCNX4Q63HM2 1172 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 RASSF8Q8NHQ8 419 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 TIGD1Q96MW7 591 aa28.06■■■□□ 2.08
RFFL-206ENST00000447669 LETM1O95202 739 aaPredicted RBP28.05■■■□□ 2.08
RFFL-206ENST00000447669 AFMP43652 599 aa28.05■■■□□ 2.08
RFFL-206ENST00000447669 SLC45A1Q9Y2W3 748 aa28.05■■■□□ 2.08
RFFL-206ENST00000447669 NR3C2P08235 984 aa28.04■■■□□ 2.08
RFFL-206ENST00000447669 SLC10A3P09131 477 aa28.04■■■□□ 2.08
RFFL-206ENST00000447669 ISM2Q6H9L7 571 aa28.04■■■□□ 2.08
RFFL-206ENST00000447669 TMEM88BA6NKF7 163 aa28.04■■■□□ 2.08
RFFL-206ENST00000447669 MDM2Q00987 491 aaPredicted RBP28.04■■■□□ 2.08
RFFL-206ENST00000447669 SPIRE1Q08AE8 756 aa28.04■■■□□ 2.08
RFFL-206ENST00000447669 ECM1Q16610 540 aa28.04■■■□□ 2.08
RFFL-206ENST00000447669 NAALADL2Q58DX5 795 aa28.04■■■□□ 2.08
RFFL-206ENST00000447669 AK8Q96MA6 479 aa28.04■■■□□ 2.08
RFFL-206ENST00000447669 CCSER1Q9C0I3 900 aa28.04■■■□□ 2.08
RFFL-206ENST00000447669 DISC1Q9NRI5 854 aa28.04■■■□□ 2.08
RFFL-206ENST00000447669 ZNFX1Q9P2E3 1918 aaKnown RBP28.04■■■□□ 2.08
RFFL-206ENST00000447669 TXLNAP40222 546 aa28.03■■■□□ 2.08
RFFL-206ENST00000447669 PAXIP1Q6ZW49 1069 aaPredicted RBP28.03■■■□□ 2.08
RFFL-206ENST00000447669 SLFN12Q8IYM2 578 aa28.03■■■□□ 2.08
RFFL-206ENST00000447669 GPRC5AQ8NFJ5 357 aa28.03■■■□□ 2.08
RFFL-206ENST00000447669 NSUN6Q8TEA1 469 aaKnown RBP28.03■■■□□ 2.08
RFFL-206ENST00000447669 FBXO40Q9UH90 709 aa28.03■■■□□ 2.08
RFFL-206ENST00000447669 UBIAD1Q9Y5Z9 338 aa28.03■■■□□ 2.08
RFFL-206ENST00000447669 TESPA1A2RU30 521 aaPredicted RBP28.02■■■□□ 2.08
RFFL-206ENST00000447669 BIN1O00499 593 aa28.02■■■□□ 2.08
RFFL-206ENST00000447669 SLC25A27O95847 323 aa28.02■■■□□ 2.08
RFFL-206ENST00000447669 PLCG1P19174 1290 aa28.02■■■□□ 2.08
RFFL-206ENST00000447669 PDIA5Q14554 519 aa28.02■■■□□ 2.08
RFFL-206ENST00000447669 MTRQ99707 1265 aa28.02■■■□□ 2.08
RFFL-206ENST00000447669 KCNH7Q9NS40 1196 aa28.02■■■□□ 2.08
RFFL-206ENST00000447669 CTAGE5O15320 804 aa28.02■■■□□ 2.08
RFFL-206ENST00000447669 NCAPH2Q6IBW4 605 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms