RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 KCNV1Q6PIU1 500 aa27.44■■□□□ 1.98
TMEM238-201ENST00000444469 DEFB128Q7Z7B8 93 aa27.44■■□□□ 1.98
TMEM238-201ENST00000444469 DHX37Q8IY37 1157 aaKnown RBP27.44■■□□□ 1.98
TMEM238-201ENST00000444469 MAP4K1Q92918 833 aa27.44■■□□□ 1.98
TMEM238-201ENST00000444469 HOXA13P31271 388 aaPredicted RBP27.43■■□□□ 1.98
TMEM238-201ENST00000444469 PBX2P40425 430 aa27.43■■□□□ 1.98
TMEM238-201ENST00000444469 LAMC2Q13753 1193 aa27.43■■□□□ 1.98
TMEM238-201ENST00000444469 CTCFLQ8NI51 663 aaPredicted RBP27.43■■□□□ 1.98
TMEM238-201ENST00000444469 PPP1R13LQ8WUF5 828 aa27.43■■□□□ 1.98
TMEM238-201ENST00000444469 PDCD2LQ9BRP1 358 aa27.43■■□□□ 1.98
TMEM238-201ENST00000444469 KATNAL1Q9BW62 490 aa27.43■■□□□ 1.98
TMEM238-201ENST00000444469 RIOX1Q9H6W3 641 aa27.43■■□□□ 1.98
TMEM238-201ENST00000444469 SLC28A3Q9HAS3 691 aa27.43■■□□□ 1.98
TMEM238-201ENST00000444469 CXXC1Q9P0U4 656 aaPredicted RBP27.43■■□□□ 1.98
TMEM238-201ENST00000444469 DDX41Q9UJV9 622 aaKnown RBP27.43■■□□□ 1.98
TMEM238-201ENST00000444469 PNMA6FA0A0J9YX94 578 aa27.42■■□□□ 1.98
TMEM238-201ENST00000444469 PITPNM1O00562 1244 aa27.42■■□□□ 1.98
TMEM238-201ENST00000444469 PPP1R11O60927 126 aaPredicted RBP27.42■■□□□ 1.98
TMEM238-201ENST00000444469 KIF5BP33176 963 aa27.42■■□□□ 1.98
TMEM238-201ENST00000444469 GHRHRQ02643 423 aa27.42■■□□□ 1.98
TMEM238-201ENST00000444469 PTGISQ16647 500 aa27.42■■□□□ 1.98
TMEM238-201ENST00000444469 NFXL1Q6ZNB6 911 aa27.42■■□□□ 1.98
TMEM238-201ENST00000444469 FTOQ9C0B1 505 aaKnown RBP eCLIP27.42■■□□□ 1.98
TMEM238-201ENST00000444469 OPLAHO14841 1288 aa27.41■■□□□ 1.98
TMEM238-201ENST00000444469 CCND2P30279 289 aa27.41■■□□□ 1.98
TMEM238-201ENST00000444469 STOX1Q6ZVD7 989 aa27.41■■□□□ 1.98
TMEM238-201ENST00000444469 FCHSD1Q86WN1 690 aa27.41■■□□□ 1.98
TMEM238-201ENST00000444469 C7orf31Q8N865 590 aa27.41■■□□□ 1.98
TMEM238-201ENST00000444469 TROAPQ12815 778 aa27.4■■□□□ 1.98
TMEM238-201ENST00000444469 PIBF1Q8WXW3 757 aa27.4■■□□□ 1.98
TMEM238-201ENST00000444469 EMID1Q96A84 441 aaPredicted RBP27.4■■□□□ 1.98
TMEM238-201ENST00000444469 SENP2Q9HC62 589 aa27.4■■□□□ 1.98
TMEM238-201ENST00000444469 TAF6LQ9Y6J9 622 aa27.4■■□□□ 1.98
TMEM238-201ENST00000444469 SCN10AQ9Y5Y9 1956 aa27.4■■□□□ 1.98
TMEM238-201ENST00000444469 ATP2A2P16615 1042 aaKnown RBP27.39■■□□□ 1.98
TMEM238-201ENST00000444469 PGM5Q15124 567 aa27.39■■□□□ 1.98
TMEM238-201ENST00000444469 MB21D2Q8IYB1 491 aaPredicted RBP27.39■■□□□ 1.98
TMEM238-201ENST00000444469 PPTC7Q8NI37 304 aa27.39■■□□□ 1.98
TMEM238-201ENST00000444469 RRP36Q96EU6 259 aaKnown RBP27.39■■□□□ 1.98
TMEM238-201ENST00000444469 ALG1Q9BT22 464 aa27.39■■□□□ 1.98
TMEM238-201ENST00000444469 NKX2-4Q9H2Z4 354 aa27.39■■□□□ 1.98
TMEM238-201ENST00000444469 SEC63Q9UGP8 760 aaKnown RBP27.39■■□□□ 1.98
TMEM238-201ENST00000444469 LAMA2P24043 3122 aaKnown RBP27.39■■□□□ 1.98
TMEM238-201ENST00000444469 CCDC69A6NI79 296 aa27.38■■□□□ 1.97
TMEM238-201ENST00000444469 PRC1O43663 620 aa27.38■■□□□ 1.97
TMEM238-201ENST00000444469 DDAH1O94760 285 aa27.38■■□□□ 1.97
TMEM238-201ENST00000444469 MCM5P33992 734 aa27.38■■□□□ 1.97
TMEM238-201ENST00000444469 ZNF654Q8IZM8 581 aa27.38■■□□□ 1.97
TMEM238-201ENST00000444469 TMTC2Q8N394 836 aa27.38■■□□□ 1.97
TMEM238-201ENST00000444469 CAGE1Q8TC20 777 aa27.38■■□□□ 1.97
TMEM238-201ENST00000444469 IGDCC4Q8TDY8 1250 aa27.38■■□□□ 1.97
TMEM238-201ENST00000444469 CUL5Q93034 780 aa27.38■■□□□ 1.97
TMEM238-201ENST00000444469 PRDM12Q9H4Q4 367 aa27.38■■□□□ 1.97
TMEM238-201ENST00000444469 KIAA1217Q5T5P2 1943 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 IQCF3P0C7M6 154 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 PSEN2P49810 448 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 GNAQP50148 359 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 ANTXR2P58335 489 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 GNPTABQ3T906 1256 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 VSIG10LQ86VR7 867 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 SESTD1Q86VW0 696 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 SPATA33Q96N06 139 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 MAP3K14Q99558 947 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 LZTS2Q9BRK4 669 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 MTA3Q9BTC8 594 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 MLXIPQ9HAP2 919 aa27.37■■□□□ 1.97
TMEM238-201ENST00000444469 CYTH3O43739 400 aa27.36■■□□□ 1.97
TMEM238-201ENST00000444469 GGPS1O95749 300 aa27.36■■□□□ 1.97
TMEM238-201ENST00000444469 TGFB3P10600 412 aa27.36■■□□□ 1.97
TMEM238-201ENST00000444469 MFSD10Q14728 455 aa27.36■■□□□ 1.97
TMEM238-201ENST00000444469 SMARCC2Q8TAQ2 1214 aa27.36■■□□□ 1.97
TMEM238-201ENST00000444469 AFAP1L1Q8TED9 768 aa27.36■■□□□ 1.97
TMEM238-201ENST00000444469 TMEM87BQ96K49 555 aa27.36■■□□□ 1.97
TMEM238-201ENST00000444469 ANO2Q9NQ90 1003 aa27.36■■□□□ 1.97
TMEM238-201ENST00000444469 PCDHA11Q9Y5I1 949 aa27.36■■□□□ 1.97
TMEM238-201ENST00000444469 SORBS3O60504 671 aa27.35■■□□□ 1.97
TMEM238-201ENST00000444469 ZNF286BP0CG31 522 aa27.35■■□□□ 1.97
TMEM238-201ENST00000444469 PPP2R2DQ66LE6 453 aa27.35■■□□□ 1.97
TMEM238-201ENST00000444469 GDF6Q6KF10 455 aaPredicted RBP27.35■■□□□ 1.97
TMEM238-201ENST00000444469 ESYT1Q9BSJ8 1104 aa27.35■■□□□ 1.97
TMEM238-201ENST00000444469 MYL10Q9BUA6 226 aa27.35■■□□□ 1.97
TMEM238-201ENST00000444469 LY9Q9HBG7 655 aa27.35■■□□□ 1.97
TMEM238-201ENST00000444469 CALM1P0DP23 149 aa27.34■■□□□ 1.97
TMEM238-201ENST00000444469 CALM2P0DP24 149 aa27.34■■□□□ 1.97
TMEM238-201ENST00000444469 CALM3P0DP25 149 aa27.34■■□□□ 1.97
TMEM238-201ENST00000444469 RABGGTBP53611 331 aa27.34■■□□□ 1.97
TMEM238-201ENST00000444469 KIAA0753Q2KHM9 967 aa27.34■■□□□ 1.97
TMEM238-201ENST00000444469 SLC35G1Q2M3R5 365 aa27.34■■□□□ 1.97
TMEM238-201ENST00000444469 CELF3Q5SZQ8 465 aaKnown RBP27.34■■□□□ 1.97
TMEM238-201ENST00000444469 KAT2BQ92831 832 aa27.34■■□□□ 1.97
TMEM238-201ENST00000444469 SLC9A7Q96T83 725 aa27.34■■□□□ 1.97
TMEM238-201ENST00000444469 SPZ1Q9BXG8 430 aa27.34■■□□□ 1.97
TMEM238-201ENST00000444469 GTF2IRD1Q9UHL9 959 aa27.34■■□□□ 1.97
TMEM238-201ENST00000444469 PPFIA4O75335 1185 aa27.33■■□□□ 1.97
TMEM238-201ENST00000444469 STAM2O75886 525 aa27.33■■□□□ 1.97
TMEM238-201ENST00000444469 PARNO95453 639 aaKnown RBP27.33■■□□□ 1.97
TMEM238-201ENST00000444469 F2P00734 622 aa27.33■■□□□ 1.97
TMEM238-201ENST00000444469 IGFBP4P22692 258 aa27.33■■□□□ 1.97
TMEM238-201ENST00000444469 KCNJ6P48051 423 aa27.33■■□□□ 1.97
TMEM238-201ENST00000444469 IL31RAQ8NI17 732 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms