RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 DYMQ7RTS9 669 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 AZI2Q9H6S1 392 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 MRPL11Q9Y3B7 192 aaKnown RBP16.32■□□□□ 0.2
TSC2-206ENST00000439117 OVOS2A0A0G2JMS6 1433 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 OVOS2A0A0J9YW53 1432 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 PHEXP78562 749 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 SLC39A14Q15043 492 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 EPHA10Q5JZY3 1008 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 OVOS2Q6IE36 1432 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 SULF1Q8IWU6 871 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 UIMC1Q96RL1 719 aa16.32■□□□□ 0.2
TSC2-206ENST00000439117 PPRC1Q5VV67 1664 aaKnown RBP16.31■□□□□ 0.2
TSC2-206ENST00000439117 QRICH2Q9H0J4 1663 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 EEF1GP26641 437 aaKnown RBP16.31■□□□□ 0.2
TSC2-206ENST00000439117 TMED1Q13445 227 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 FBXO11Q86XK2 927 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 DRC3Q9H069 523 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 POLR3EQ9NVU0 708 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 PPP6R2O75170 966 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 CYP19A1P11511 503 aaPredicted RBP16.31■□□□□ 0.2
TSC2-206ENST00000439117 CYP2C19P33261 490 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 GYS2P54840 703 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 RASGRF1Q13972 1273 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 DCUN1D2Q6PH85 259 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 UHMK1Q8TAS1 419 aaKnown RBP16.31■□□□□ 0.2
TSC2-206ENST00000439117 GPHNQ9NQX3 736 aaPredicted RBP16.31■□□□□ 0.2
TSC2-206ENST00000439117 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 ARHGEF40Q8TER5 1519 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 BTBD18B2RXH4 712 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 TBC1D1Q86TI0 1168 aaPredicted RBP16.31■□□□□ 0.2
TSC2-206ENST00000439117 GPIHBP1Q8IV16 184 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 PUS7LQ9H0K6 701 aaKnown RBP16.31■□□□□ 0.2
TSC2-206ENST00000439117 CRB1P82279 1406 aa16.31■□□□□ 0.2
TSC2-206ENST00000439117 LOC102724159A0A0B4J2E5 919 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 XRCC5P13010 732 aaKnown RBP16.3■□□□□ 0.2
TSC2-206ENST00000439117 RBL2Q08999 1139 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 SCRN1Q12765 414 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 RASA3Q14644 834 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 PWP2Q15269 919 aaKnown RBP16.3■□□□□ 0.2
TSC2-206ENST00000439117 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.3■□□□□ 0.2
TSC2-206ENST00000439117 ANKRD20A4Q4UJ75 823 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 ANKRD20A8PQ5CZ79 823 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 ANKRD20A2Q5SQ80 823 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 ANKRD20A1Q5TYW2 823 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 LCORLQ8N3X6 602 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 ENOX1Q8TC92 643 aaKnown RBP16.3■□□□□ 0.2
TSC2-206ENST00000439117 BZW2Q9Y6E2 419 aaKnown RBP16.3■□□□□ 0.2
TSC2-206ENST00000439117 AGLP35573 1532 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 CLTCQ00610 1675 aaKnown RBP16.3■□□□□ 0.2
TSC2-206ENST00000439117 GAS7O60861 476 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 ALAS1P13196 640 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 MAN1A1P33908 653 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 STRN3Q13033 797 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 NLRX1Q86UT6 975 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 HINFPQ9BQA5 517 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 PNMA2Q9UL42 364 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 DPH6Q7L8W6 267 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 ZNF354CQ86Y25 554 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 CSRNP1Q96S65 589 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 YIPF3Q9GZM5 350 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 LAMC1P11047 1609 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 INO80Q9ULG1 1556 aaPredicted RBP16.3■□□□□ 0.2
TSC2-206ENST00000439117 CLRN2A0PK11 232 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 ADRA2BP18089 450 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 TRIM42Q8IWZ5 723 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 MYOCDQ8IZQ8 938 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 CXorf38Q8TB03 319 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 DCPSQ96C86 337 aaKnown RBP16.3■□□□□ 0.2
TSC2-206ENST00000439117 CXorf56Q9H5V9 222 aa16.3■□□□□ 0.2
TSC2-206ENST00000439117 PRKAB2O43741 272 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 ATF2P15336 505 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 NEK8Q86SG6 692 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.29■□□□□ 0.2
TSC2-206ENST00000439117 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.2
TSC2-206ENST00000439117 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.29■□□□□ 0.2
TSC2-206ENST00000439117 TMEM232C9JQI7 657 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 PGRMC1O00264 195 aaKnown RBP16.29■□□□□ 0.2
TSC2-206ENST00000439117 MRPS9P82933 396 aaKnown RBP16.29■□□□□ 0.2
TSC2-206ENST00000439117 GPATCH4Q5T3I0 446 aaKnown RBP16.29■□□□□ 0.2
TSC2-206ENST00000439117 PI4K2BQ8TCG2 481 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 SERPINB13Q9UIV8 391 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 EXOC3O60645 756 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 CAPRIN2Q6IMN6 1127 aaKnown RBP16.29■□□□□ 0.2
TSC2-206ENST00000439117 MYCT1Q8N699 235 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 ANKRD13CQ8N6S4 541 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 NOVA2Q9UNW9 492 aaKnown RBP16.29■□□□□ 0.2
TSC2-206ENST00000439117 USTQ9Y2C2 406 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 COL15A1P39059 1388 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 POLR2MP0CAP2 368 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 MX2P20592 715 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 ABCB4P21439 1286 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 PDCLQ13371 301 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 MRFAP1Q9Y605 127 aa16.29■□□□□ 0.2
TSC2-206ENST00000439117 DHX9Q08211 1270 aaKnown RBP16.28■□□□□ 0.2
TSC2-206ENST00000439117 GNPTABQ3T906 1256 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 NELFCDQ8IXH7 590 aa16.28■□□□□ 0.2
TSC2-206ENST00000439117 BATF3Q9NR55 127 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms