RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 NDUFV1P49821 464 aa12.39□□□□□ -0.43
CPNE1-214ENST00000435747 OAZ1P54368 228 aa12.39□□□□□ -0.43
CPNE1-214ENST00000435747 RRP1P56182 461 aaKnown RBP12.39□□□□□ -0.43
CPNE1-214ENST00000435747 CHMP4BP1P59074 171 aa12.39□□□□□ -0.43
CPNE1-214ENST00000435747 PUM1Q14671 1186 aaKnown RBP eCLIP12.39□□□□□ -0.43
CPNE1-214ENST00000435747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.39□□□□□ -0.431e-8■■□□□ 11.7
CPNE1-214ENST00000435747 YME1L1Q96TA2 773 aa12.39□□□□□ -0.43
CPNE1-214ENST00000435747 IGFLR1Q9H665 355 aa12.39□□□□□ -0.43
CPNE1-214ENST00000435747 ARMT1Q9H993 441 aa12.39□□□□□ -0.43
CPNE1-214ENST00000435747 ECHDC1Q9NTX5 307 aa12.39□□□□□ -0.43
CPNE1-214ENST00000435747 GREB1LQ9C091 1923 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-214ENST00000435747 RAD50Q92878 1312 aa12.38□□□□□ -0.43
CPNE1-214ENST00000435747 SALL3Q9BXA9 1300 aa12.38□□□□□ -0.43
CPNE1-214ENST00000435747 MYO10Q9HD67 2058 aa12.38□□□□□ -0.43
CPNE1-214ENST00000435747 KPNA6O60684 536 aa12.38□□□□□ -0.43
CPNE1-214ENST00000435747 MBD4O95243 580 aa12.38□□□□□ -0.43
CPNE1-214ENST00000435747 EYA4O95677 639 aa12.38□□□□□ -0.43
CPNE1-214ENST00000435747 PDGFBP01127 241 aaPredicted RBP12.38□□□□□ -0.43
CPNE1-214ENST00000435747 RIPOR3Q96MK2 946 aa12.38□□□□□ -0.43
CPNE1-214ENST00000435747 WDR11Q9BZH6 1224 aa12.38□□□□□ -0.43
CPNE1-214ENST00000435747 PUS7LQ9H0K6 701 aaKnown RBP12.38□□□□□ -0.43
CPNE1-214ENST00000435747 OTOGLQ3ZCN5 2332 aa12.38□□□□□ -0.43
CPNE1-214ENST00000435747 LINC01565O15544 149 aa12.37□□□□□ -0.43
CPNE1-214ENST00000435747 ICAM3P32942 547 aa12.37□□□□□ -0.43
CPNE1-214ENST00000435747 CDK8P49336 464 aa12.37□□□□□ -0.43
CPNE1-214ENST00000435747 PTPN21Q16825 1174 aa12.37□□□□□ -0.43
CPNE1-214ENST00000435747 RPGRIP1Q96KN7 1286 aa12.37□□□□□ -0.43
CPNE1-214ENST00000435747 LMAN2LQ9H0V9 348 aa12.37□□□□□ -0.43
CPNE1-214ENST00000435747 INCENPQ9NQS7 918 aa12.37□□□□□ -0.43
CPNE1-214ENST00000435747 ATP8A2Q9NTI2 1148 aa12.37□□□□□ -0.43
CPNE1-214ENST00000435747 RNF146Q9NTX7 359 aa12.37□□□□□ -0.43
CPNE1-214ENST00000435747 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
CPNE1-214ENST00000435747 F5H6K3 240 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 NDUFB10O96000 172 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 CKBP12277 381 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 CTNNB1P35222 781 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 GTF2F1P35269 517 aaKnown RBP eCLIP12.36□□□□□ -0.432e-12■□□□□ 10
CPNE1-214ENST00000435747 KLRC3Q07444 240 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 RBL2Q08999 1139 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 ST3GAL2Q16842 350 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 C12orf60Q5U649 245 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 TSHZ3Q63HK5 1081 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 ZBTB33Q86T24 672 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 TMEM105Q8N8V8 129 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 KBTBD3Q8NAB2 608 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 PI4K2BQ8TCG2 481 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 OTUD7AQ8TE49 926 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-214ENST00000435747 DHX38Q92620 1227 aaKnown RBP12.36□□□□□ -0.43
CPNE1-214ENST00000435747 MSLNLQ96KJ4 702 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 PHF7Q9BWX1 381 aaPredicted RBP12.36□□□□□ -0.43
CPNE1-214ENST00000435747 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.36□□□□□ -0.434e-7■■■■■ 43.8
CPNE1-214ENST00000435747 FEM1BQ9UK73 627 aa12.36□□□□□ -0.43
CPNE1-214ENST00000435747 LCTP09848 1927 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 CYP2D7A0A087X1C5 515 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 LGR5O75473 907 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 CSPG5O95196 566 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 ADAM15Q13444 863 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 COL9A2Q14055 689 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-214ENST00000435747 GDF6Q6KF10 455 aaPredicted RBP12.35□□□□□ -0.43
CPNE1-214ENST00000435747 AMOTL1Q8IY63 956 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 KIAA2013Q8IYS2 634 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 SMRP1Q8NCR6 262 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 OSBP2Q969R2 916 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 CTAGE1Q96RT6 745 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 STRBPQ96SI9 672 aaKnown RBP12.35□□□□□ -0.43
CPNE1-214ENST00000435747 BCL11AQ9H165 835 aa12.35□□□□□ -0.43
CPNE1-214ENST00000435747 GRM6O15303 877 aa12.34□□□□□ -0.43
CPNE1-214ENST00000435747 RB1P06400 928 aa12.34□□□□□ -0.43
CPNE1-214ENST00000435747 TKFCQ3LXA3 575 aa12.34□□□□□ -0.43
CPNE1-214ENST00000435747 CTR9Q6PD62 1173 aa12.34□□□□□ -0.43
CPNE1-214ENST00000435747 C16orf86Q6ZW13 317 aa12.34□□□□□ -0.43
CPNE1-214ENST00000435747 KCNG4Q8TDN1 519 aa12.34□□□□□ -0.43
CPNE1-214ENST00000435747 MORC4Q8TE76 937 aa12.34□□□□□ -0.43
CPNE1-214ENST00000435747 PPP2R3CQ969Q6 453 aa12.34□□□□□ -0.43
CPNE1-214ENST00000435747 C11orf84Q9BUA3 381 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-214ENST00000435747 USP15Q9Y4E8 981 aaPredicted RBP12.34□□□□□ -0.43
CPNE1-214ENST00000435747 TTC41PQ6P2S7 1318 aa12.34□□□□□ -0.43
CPNE1-214ENST00000435747 A6NJR5 290 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 GSG1L2A8MUP6 293 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 NKRFO15226 690 aaKnown RBP eCLIP12.33□□□□□ -0.44
CPNE1-214ENST00000435747 UPP2O95045 317 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 FDX1P10109 184 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 ALAS1P13196 640 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 COASYQ13057 564 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 PPP2R5BQ15173 497 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 ZSCAN25Q6NSZ9 544 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 SESTD1Q86VW0 696 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 TRERF1Q96PN7 1200 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.33□□□□□ -0.44
CPNE1-214ENST00000435747 CYP39A1Q9NYL5 469 aa12.33□□□□□ -0.44
CPNE1-214ENST00000435747 RBM47A0AV96 593 aaKnown RBP12.32□□□□□ -0.44
CPNE1-214ENST00000435747 C5orf67F2Z3F1 127 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 RBAK-RBAKDNI3L0D1 243 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 HDAC1Q13547 482 aaPredicted RBP12.32□□□□□ -0.44
CPNE1-214ENST00000435747 SBK1Q52WX2 424 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 FIBCD1Q8N539 461 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 DBF4BQ8NFT6 615 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 APPBP2Q92624 585 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 TOP1MTQ969P6 601 aa12.32□□□□□ -0.44
CPNE1-214ENST00000435747 EPB41L4AQ9HCS5 686 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms