RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 CCDC155Q8N6L0 562 aa17.57■□□□□ 0.4
HERC3-206ENST00000431413 CTCFLQ8NI51 663 aaPredicted RBP17.57■□□□□ 0.4
HERC3-206ENST00000431413 MTA3Q9BTC8 594 aa17.57■□□□□ 0.4
HERC3-206ENST00000431413 PBX4Q9BYU1 374 aa17.57■□□□□ 0.4
HERC3-206ENST00000431413 DDX41Q9UJV9 622 aaKnown RBP17.57■□□□□ 0.4
HERC3-206ENST00000431413 SLC4A7Q9Y6M7 1214 aa17.57■□□□□ 0.4
HERC3-206ENST00000431413 PITPNM1O00562 1244 aa17.56■□□□□ 0.4
HERC3-206ENST00000431413 OPLAHO14841 1288 aa17.56■□□□□ 0.4
HERC3-206ENST00000431413 PPP1R11O60927 126 aaPredicted RBP17.56■□□□□ 0.4
HERC3-206ENST00000431413 MYCLP12524 364 aaPredicted RBP17.56■□□□□ 0.4
HERC3-206ENST00000431413 ACTN1P12814 892 aa17.56■□□□□ 0.4
HERC3-206ENST00000431413 RFC2P35250 354 aa17.56■□□□□ 0.4
HERC3-206ENST00000431413 ARHGAP1Q07960 439 aa17.56■□□□□ 0.4
HERC3-206ENST00000431413 DHX37Q8IY37 1157 aaKnown RBP17.56■□□□□ 0.4
HERC3-206ENST00000431413 EMID1Q96A84 441 aaPredicted RBP17.56■□□□□ 0.4
HERC3-206ENST00000431413 SCLYQ96I15 445 aa17.56■□□□□ 0.4
HERC3-206ENST00000431413 MAP3K14Q99558 947 aa17.56■□□□□ 0.4
HERC3-206ENST00000431413 PDCD2LQ9BRP1 358 aa17.56■□□□□ 0.4
HERC3-206ENST00000431413 KATNAL1Q9BW62 490 aa17.56■□□□□ 0.4
HERC3-206ENST00000431413 ZBBXA8MT70 800 aa17.55■□□□□ 0.4
HERC3-206ENST00000431413 GRXCR1A8MXD5 290 aa17.55■□□□□ 0.4
HERC3-206ENST00000431413 HOXA13P31271 388 aaPredicted RBP17.55■□□□□ 0.4
HERC3-206ENST00000431413 GRIN2CQ14957 1233 aa17.55■□□□□ 0.4
HERC3-206ENST00000431413 MB21D2Q8IYB1 491 aaPredicted RBP17.55■□□□□ 0.4
HERC3-206ENST00000431413 IGDCC4Q8TDY8 1250 aa17.55■□□□□ 0.4
HERC3-206ENST00000431413 GAS2L1Q99501 681 aaPredicted RBP17.55■□□□□ 0.4
HERC3-206ENST00000431413 CXXC1Q9P0U4 656 aaPredicted RBP17.55■□□□□ 0.4
HERC3-206ENST00000431413 TAF6LQ9Y6J9 622 aa17.55■□□□□ 0.4
HERC3-206ENST00000431413 MYH6P13533 1939 aa17.55■□□□□ 0.4
HERC3-206ENST00000431413 DDAH1O94760 285 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 TGFB3P10600 412 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 CCND2P30279 289 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 MCM5P33992 734 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 PBX2P40425 430 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 ANTXR2P58335 489 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 PGM5Q15124 567 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 PTGISQ16647 500 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 NFXL1Q6ZNB6 911 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 DEFB128Q7Z7B8 93 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 VSIG10LQ86VR7 867 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 SESTD1Q86VW0 696 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 FCHSD1Q86WN1 690 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 C7orf31Q8N865 590 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 PPTC7Q8NI37 304 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 CAGE1Q8TC20 777 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 RRP36Q96EU6 259 aaKnown RBP17.54■□□□□ 0.4
HERC3-206ENST00000431413 TMEM87BQ96K49 555 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 LZTS2Q9BRK4 669 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 SLC28A3Q9HAS3 691 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 SENP2Q9HC62 589 aa17.54■□□□□ 0.4
HERC3-206ENST00000431413 SEC63Q9UGP8 760 aaKnown RBP17.54■□□□□ 0.4
HERC3-206ENST00000431413 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
HERC3-206ENST00000431413 CCDC69A6NI79 296 aa17.53■□□□□ 0.4
HERC3-206ENST00000431413 PRC1O43663 620 aa17.53■□□□□ 0.4
HERC3-206ENST00000431413 CYTH3O43739 400 aa17.53■□□□□ 0.4
HERC3-206ENST00000431413 SMARCA1P28370 1054 aa17.53■□□□□ 0.4
HERC3-206ENST00000431413 GNAQP50148 359 aa17.53■□□□□ 0.4
HERC3-206ENST00000431413 ZNF654Q8IZM8 581 aa17.53■□□□□ 0.4
HERC3-206ENST00000431413 SPZ1Q9BXG8 430 aa17.53■□□□□ 0.4
HERC3-206ENST00000431413 PPFIA4O75335 1185 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 IQCF3P0C7M6 154 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 CALM1P0DP23 149 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 CALM2P0DP24 149 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 CALM3P0DP25 149 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 ATP2A2P16615 1042 aaKnown RBP17.52■□□□□ 0.4
HERC3-206ENST00000431413 SLC35G1Q2M3R5 365 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 GNPTABQ3T906 1256 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 CUL5Q93034 780 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 SPATA33Q96N06 139 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 ESYT1Q9BSJ8 1104 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 FTOQ9C0B1 505 aaKnown RBP eCLIP17.52■□□□□ 0.4
HERC3-206ENST00000431413 LSG1Q9H089 658 aaKnown RBP17.52■□□□□ 0.4
HERC3-206ENST00000431413 LY9Q9HBG7 655 aa17.52■□□□□ 0.4
HERC3-206ENST00000431413 A0A0C4DFX4 3053 aa17.52■□□□□ 0.39
HERC3-206ENST00000431413 STAM2O75886 525 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 RGS20O76081 388 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 PARNO95453 639 aaKnown RBP17.51■□□□□ 0.39
HERC3-206ENST00000431413 GGPS1O95749 300 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 PSEN2P49810 448 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 CELF3Q5SZQ8 465 aaKnown RBP17.51■□□□□ 0.39
HERC3-206ENST00000431413 RNF20Q5VTR2 975 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 MYSM1Q5VVJ2 828 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 AFAP1L1Q8TED9 768 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 PPP1R13LQ8WUF5 828 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 PIBF1Q8WXW3 757 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 KAT2BQ92831 832 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 MLXIPQ9HAP2 919 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 ANO2Q9NQ90 1003 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 GTF2IRD1Q9UHL9 959 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 PCDHA11Q9Y5I1 949 aa17.51■□□□□ 0.39
HERC3-206ENST00000431413 SLC27A2O14975 620 aa17.5■□□□□ 0.39
HERC3-206ENST00000431413 F2P00734 622 aa17.5■□□□□ 0.39
HERC3-206ENST00000431413 LIFRP42702 1097 aa17.5■□□□□ 0.39
HERC3-206ENST00000431413 MFSD10Q14728 455 aa17.5■□□□□ 0.39
HERC3-206ENST00000431413 KIAA0753Q2KHM9 967 aa17.5■□□□□ 0.39
HERC3-206ENST00000431413 BMP2KLQ5H9B9 411 aa17.5■□□□□ 0.39
HERC3-206ENST00000431413 GDF6Q6KF10 455 aaPredicted RBP17.5■□□□□ 0.39
HERC3-206ENST00000431413 CENPQQ7L2Z9 268 aaPredicted RBP17.5■□□□□ 0.39
HERC3-206ENST00000431413 SMARCC2Q8TAQ2 1214 aa17.5■□□□□ 0.39
HERC3-206ENST00000431413 ALG1Q9BT22 464 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms