RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 ZNF652Q9Y2D9 606 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 NUP98P52948 1817 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 BUB1O43683 1085 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 AKR1B10O60218 316 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 MOCS3O95396 460 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 CDR1P51861 262 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 APBA1Q02410 837 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 CEP85LQ5SZL2 805 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 C1QTNF12Q5T7M4 302 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 FAXDC2Q96IV6 333 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 MTA3Q9BTC8 594 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 TBC1D7Q9P0N9 293 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 NID2Q14112 1375 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 TOGARAM1Q9Y4F4 1720 aa16.3■□□□□ 0.2
MARK3-205ENST00000429436 TMCO5BA8MYB1 307 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 NCK2O43639 380 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 GUCY1A3Q02108 690 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 GRIK5Q16478 980 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 FAM182BQ5T319 152 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 TBC1D9BQ66K14 1250 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 TBC1D31Q96DN5 1066 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 EME2A4GXA9 379 aaPredicted RBP16.29■□□□□ 0.2
MARK3-205ENST00000429436 KLRF2D3W0D1 207 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 AGPSO00116 658 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 USP14P54578 494 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 KRT83P78385 493 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 TRAPPC11Q7Z392 1133 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 ARMC2Q8NEN0 867 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 TMEM260Q9NX78 707 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.29■□□□□ 0.2
MARK3-205ENST00000429436 LRP6O75581 1613 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 MYH3P11055 1940 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 DNM2P50570 870 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 SLC35G1Q2M3R5 365 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 PARD3BQ8TEW8 1205 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 DUSP9Q99956 384 aaKnown RBP16.29■□□□□ 0.2
MARK3-205ENST00000429436 NLRC4Q9NPP4 1024 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 CAPN11Q9UMQ6 739 aa16.29■□□□□ 0.2
MARK3-205ENST00000429436 SMCO2A6NFE2 343 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 EPHB6O15197 1021 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 EIF3HO15372 352 aaKnown RBP eCLIP16.28■□□□□ 0.2
MARK3-205ENST00000429436 RANBP1P43487 201 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 TRAPPC10P48553 1259 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 INHBEP58166 350 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 TMC4Q7Z404 712 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 CCDC47Q96A33 483 aaKnown RBP16.28■□□□□ 0.2
MARK3-205ENST00000429436 STRCP1A6NGW2 1772 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 MYH13Q9UKX3 1938 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 COL4A1P02462 1669 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 KLRC4O43908 158 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 CAPN15O75808 1086 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 SETSIPP0DME0 302 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 TDRD12Q587J7 1177 aaKnown RBP16.28■□□□□ 0.2
MARK3-205ENST00000429436 TTI2Q6NXR4 508 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 RRAGAQ7L523 313 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 P2RX5Q93086 422 aa16.28■□□□□ 0.2
MARK3-205ENST00000429436 ZNF804BA4D1E1 1349 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 MARCH6O60337 910 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 ADCY2Q08462 1091 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 C11orf91Q3C1V1 193 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 MARCH10Q8NA82 808 aaPredicted RBP16.27■□□□□ 0.2
MARK3-205ENST00000429436 CCDC114Q96M63 670 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 NLRP3Q96P20 1036 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 ZHX3Q9H4I2 956 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 FRMPD2Q68DX3 1309 aaPredicted RBP16.27■□□□□ 0.2
MARK3-205ENST00000429436 GBP2P32456 591 aaPredicted RBP16.27■□□□□ 0.2
MARK3-205ENST00000429436 PPFIA1Q13136 1202 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 SF3B2Q13435 895 aaKnown RBP16.27■□□□□ 0.2
MARK3-205ENST00000429436 CCDC181Q5TID7 509 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 ARL6IP4Q66PJ3 421 aaKnown RBP16.27■□□□□ 0.2
MARK3-205ENST00000429436 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 CDK5RAP3Q96JB5 506 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 IFIH1Q9BYX4 1025 aaKnown RBP16.27■□□□□ 0.2
MARK3-205ENST00000429436 CAPN6Q9Y6Q1 641 aa16.27■□□□□ 0.2
MARK3-205ENST00000429436 DCCP43146 1447 aa16.27■□□□□ 0.19
MARK3-205ENST00000429436 KRT14P02533 472 aa16.27■□□□□ 0.19
MARK3-205ENST00000429436 HPDP32754 393 aaPredicted RBP16.27■□□□□ 0.19
MARK3-205ENST00000429436 RWDD2BP57060 319 aa16.27■□□□□ 0.19
MARK3-205ENST00000429436 CC2D2BQ6DHV5 1058 aa16.27■□□□□ 0.19
MARK3-205ENST00000429436 PTF1AQ7RTS3 328 aa16.27■□□□□ 0.19
MARK3-205ENST00000429436 TMEM47Q9BQJ4 181 aa16.27■□□□□ 0.19
MARK3-205ENST00000429436 KLC4Q9NSK0 619 aa16.27■□□□□ 0.19
MARK3-205ENST00000429436 MYO1AQ9UBC5 1043 aa16.27■□□□□ 0.19
MARK3-205ENST00000429436 MAD2L2Q9UI95 211 aa16.27■□□□□ 0.19
MARK3-205ENST00000429436 DDX60Q8IY21 1712 aaKnown RBP16.27■□□□□ 0.19
MARK3-205ENST00000429436 EEF1GP26641 437 aaKnown RBP16.26■□□□□ 0.19
MARK3-205ENST00000429436 SOGA3Q5TF21 947 aa16.26■□□□□ 0.19
MARK3-205ENST00000429436 CLEC10AQ8IUN9 316 aa16.26■□□□□ 0.19
MARK3-205ENST00000429436 GLIS3Q8NEA6 775 aa16.26■□□□□ 0.19
MARK3-205ENST00000429436 ZNF507Q8TCN5 953 aa16.26■□□□□ 0.19
MARK3-205ENST00000429436 PYM1Q9BRP8 204 aaKnown RBP16.26■□□□□ 0.19
MARK3-205ENST00000429436 ATP8A2Q9NTI2 1148 aa16.26■□□□□ 0.19
MARK3-205ENST00000429436 ARPP21Q9UBL0 812 aaPredicted RBP16.26■□□□□ 0.19
MARK3-205ENST00000429436 CHUKO15111 745 aa16.26■□□□□ 0.19
MARK3-205ENST00000429436 LDHBP07195 334 aaKnown RBP16.26■□□□□ 0.19
MARK3-205ENST00000429436 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
MARK3-205ENST00000429436 MYLK4Q86YV6 388 aaPredicted RBP16.26■□□□□ 0.19
MARK3-205ENST00000429436 GIMAP8Q8ND71 665 aaPredicted RBP16.26■□□□□ 0.19
MARK3-205ENST00000429436 CCDC26Q8TAB7 109 aa16.26■□□□□ 0.19
MARK3-205ENST00000429436 DNAJC7Q99615 494 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms