RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 GRM4Q14833 912 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 STXBP2Q15833 593 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 ARHGEF16Q5VV41 709 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 DEFB128Q7Z7B8 93 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 IL31RAQ8NI17 732 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 PIGSQ96S52 555 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 TANC1Q9C0D5 1861 aa18.07■□□□□ 0.48
SEC13-210ENST00000428626 MYH7BA7E2Y1 1941 aa18.06■□□□□ 0.48
SEC13-210ENST00000428626 IFIT3O14879 490 aaKnown RBP18.06■□□□□ 0.48
SEC13-210ENST00000428626 KPNA6O60684 536 aa18.06■□□□□ 0.48
SEC13-210ENST00000428626 HOXA13P31271 388 aaPredicted RBP18.06■□□□□ 0.48
SEC13-210ENST00000428626 CHMP4BP1P59074 171 aa18.06■□□□□ 0.48
SEC13-210ENST00000428626 TROAPQ12815 778 aa18.06■□□□□ 0.48
SEC13-210ENST00000428626 BRDTQ58F21 947 aaPredicted RBP18.06■□□□□ 0.48
SEC13-210ENST00000428626 ZFP91Q96JP5 570 aaPredicted RBP18.06■□□□□ 0.48
SEC13-210ENST00000428626 RIOX1Q9H6W3 641 aa18.06■□□□□ 0.48
SEC13-210ENST00000428626 PRDM6Q9NQX0 595 aa18.06■□□□□ 0.48
SEC13-210ENST00000428626 U3KPZ7 1027 aaPredicted RBP18.06■□□□□ 0.48
SEC13-210ENST00000428626 IQCF3P0C7M6 154 aa18.05■□□□□ 0.48
SEC13-210ENST00000428626 PTPN11Q06124 597 aaPredicted RBP18.05■□□□□ 0.48
SEC13-210ENST00000428626 GPNMBQ14956 572 aa18.05■□□□□ 0.48
SEC13-210ENST00000428626 RAB30Q15771 203 aa18.05■□□□□ 0.48
SEC13-210ENST00000428626 GDF6Q6KF10 455 aaPredicted RBP18.05■□□□□ 0.48
SEC13-210ENST00000428626 HOMER1Q86YM7 354 aa18.05■□□□□ 0.48
SEC13-210ENST00000428626 RPUSD2Q8IZ73 545 aaKnown RBP18.05■□□□□ 0.48
SEC13-210ENST00000428626 RUFY2Q8WXA3 655 aa18.05■□□□□ 0.48
SEC13-210ENST00000428626 DHX38Q92620 1227 aaKnown RBP18.05■□□□□ 0.48
SEC13-210ENST00000428626 GPKOWQ92917 476 aaPredicted RBP eCLIP18.05■□□□□ 0.48
SEC13-210ENST00000428626 PDCD2LQ9BRP1 358 aa18.05■□□□□ 0.48
SEC13-210ENST00000428626 MSRAQ9UJ68 235 aa18.05■□□□□ 0.48
SEC13-210ENST00000428626 PCDHA1Q9Y5I3 950 aa18.05■□□□□ 0.48
SEC13-210ENST00000428626 ZBBXA8MT70 800 aa18.04■□□□□ 0.48
SEC13-210ENST00000428626 EIF3JO75822 258 aaKnown RBP18.04■□□□□ 0.48
SEC13-210ENST00000428626 TRDNQ13061 729 aa18.04■□□□□ 0.48
SEC13-210ENST00000428626 MB21D2Q8IYB1 491 aaPredicted RBP18.04■□□□□ 0.48
SEC13-210ENST00000428626 IGDCC4Q8TDY8 1250 aa18.04■□□□□ 0.48
SEC13-210ENST00000428626 MAP4K1Q92918 833 aa18.04■□□□□ 0.48
SEC13-210ENST00000428626 MTIF3Q9H2K0 278 aaKnown RBP18.04■□□□□ 0.48
SEC13-210ENST00000428626 SLC4A7Q9Y6M7 1214 aa18.04■□□□□ 0.48
SEC13-210ENST00000428626 PITPNM1O00562 1244 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 SORBS3O60504 671 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 MYCLP12524 364 aaPredicted RBP18.03■□□□□ 0.48
SEC13-210ENST00000428626 SP2Q02086 613 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 PGM5Q15124 567 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 PTGISQ16647 500 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 VSIG10LQ86VR7 867 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 SESTD1Q86VW0 696 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 NCOA7Q8NI08 942 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
SEC13-210ENST00000428626 BCAS3Q9H6U6 928 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 MRVI1Q9Y6F6 885 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 PTPRSQ13332 1948 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 REV3LO60673 3130 aa18.03■□□□□ 0.48
SEC13-210ENST00000428626 ARHGEF15O94989 841 aa18.02■□□□□ 0.48
SEC13-210ENST00000428626 PFKMP08237 780 aa18.02■□□□□ 0.48
SEC13-210ENST00000428626 ZNF286BP0CG31 522 aa18.02■□□□□ 0.48
SEC13-210ENST00000428626 ATP2A2P16615 1042 aaKnown RBP18.02■□□□□ 0.48
SEC13-210ENST00000428626 HIC1Q14526 733 aa18.02■□□□□ 0.48
SEC13-210ENST00000428626 WTAPQ15007 396 aa18.02■□□□□ 0.48
SEC13-210ENST00000428626 MYL10Q9BUA6 226 aa18.02■□□□□ 0.48
SEC13-210ENST00000428626 SLC28A3Q9HAS3 691 aa18.02■□□□□ 0.48
SEC13-210ENST00000428626 HDAC6Q9UBN7 1215 aa18.02■□□□□ 0.48
SEC13-210ENST00000428626 RBM8AQ9Y5S9 174 aaKnown RBP18.02■□□□□ 0.48
SEC13-210ENST00000428626 HAS3O00219 553 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 HOXD8P13378 290 aaPredicted RBP18.01■□□□□ 0.47
SEC13-210ENST00000428626 CASTP20810 708 aaKnown RBP18.01■□□□□ 0.47
SEC13-210ENST00000428626 PSEN2P49810 448 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 DGKDQ16760 1214 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 TCTN1Q2MV58 587 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 TMEM67Q5HYA8 995 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 MYSM1Q5VVJ2 828 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 RALYLQ86SE5 291 aaKnown RBP18.01■□□□□ 0.47
SEC13-210ENST00000428626 SKAP1Q86WV1 359 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 PPTC7Q8NI37 304 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 PIBF1Q8WXW3 757 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 PPM1EQ8WY54 764 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 WNT8BQ93098 351 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 GAS2L1Q99501 681 aaPredicted RBP18.01■□□□□ 0.47
SEC13-210ENST00000428626 LY9Q9HBG7 655 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 MAP3K20Q9NYL2 800 aaKnown RBP18.01■□□□□ 0.47
SEC13-210ENST00000428626 GTF2IRD1Q9UHL9 959 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 PCDHA11Q9Y5I1 949 aa18.01■□□□□ 0.47
SEC13-210ENST00000428626 TRANK1O15050 2925 aa18■□□□□ 0.47
SEC13-210ENST00000428626 PNMA6FA0A0J9YX94 578 aa18■□□□□ 0.47
SEC13-210ENST00000428626 F2P00734 622 aa18■□□□□ 0.47
SEC13-210ENST00000428626 UBA1P22314 1058 aaKnown RBP18■□□□□ 0.47
SEC13-210ENST00000428626 RFC2P35250 354 aa18■□□□□ 0.47
SEC13-210ENST00000428626 ZNF200P98182 395 aaPredicted RBP18■□□□□ 0.47
SEC13-210ENST00000428626 BFSP2Q13515 415 aa18■□□□□ 0.47
SEC13-210ENST00000428626 LAMC2Q13753 1193 aa18■□□□□ 0.47
SEC13-210ENST00000428626 HSDL1Q3SXM5 330 aa18■□□□□ 0.47
SEC13-210ENST00000428626 FCHSD1Q86WN1 690 aa18■□□□□ 0.47
SEC13-210ENST00000428626 DHX37Q8IY37 1157 aaKnown RBP18■□□□□ 0.47
SEC13-210ENST00000428626 RETREG2Q8NC44 543 aa18■□□□□ 0.47
SEC13-210ENST00000428626 ALG1Q9BT22 464 aa18■□□□□ 0.47
SEC13-210ENST00000428626 LSG1Q9H089 658 aaKnown RBP18■□□□□ 0.47
SEC13-210ENST00000428626 NOD1Q9Y239 953 aa18■□□□□ 0.47
SEC13-210ENST00000428626 MUC3AQ02505 3323 aa18■□□□□ 0.47
SEC13-210ENST00000428626 ERICH2A1L162 156 aa17.99■□□□□ 0.47
SEC13-210ENST00000428626 GCOM1H8Y6P7 765 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms