RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 AFAP1L1Q8TED9 768 aa20.27■□□□□ 0.84
DDR1-235ENST00000428153 AFG1LQ8WV93 481 aa20.27■□□□□ 0.84
DDR1-235ENST00000428153 DDX41Q9UJV9 622 aaKnown RBP20.27■□□□□ 0.84
DDR1-235ENST00000428153 ZBTB5O15062 677 aa20.26■□□□□ 0.83
DDR1-235ENST00000428153 NR3C2P08235 984 aa20.26■□□□□ 0.83
DDR1-235ENST00000428153 LY6KQ17RY6 165 aa20.26■□□□□ 0.83
DDR1-235ENST00000428153 TMEM67Q5HYA8 995 aa20.26■□□□□ 0.83
DDR1-235ENST00000428153 SEPT14Q6ZU15 432 aa20.26■□□□□ 0.83
DDR1-235ENST00000428153 RUFY2Q8WXA3 655 aa20.26■□□□□ 0.83
DDR1-235ENST00000428153 KATNAL1Q9BW62 490 aa20.26■□□□□ 0.83
DDR1-235ENST00000428153 PXMP2Q9NR77 195 aa20.26■□□□□ 0.83
DDR1-235ENST00000428153 PALM3A6NDB9 673 aaPredicted RBP20.25■□□□□ 0.83
DDR1-235ENST00000428153 KLRF2D3W0D1 207 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 LAMC2Q13753 1193 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 PTGISQ16647 500 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 STOX1Q6ZVD7 989 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 DEFB128Q7Z7B8 93 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 STAG2Q8N3U4 1231 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 PPTC7Q8NI37 304 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 KAT2BQ92831 832 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 VAT1LQ9HCJ6 419 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 THEGQ9P2T0 379 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 MAD2L2Q9UI95 211 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
DDR1-235ENST00000428153 SCN5AQ14524 2016 aa20.25■□□□□ 0.83
DDR1-235ENST00000428153 XIRP2A4UGR9 3374 aa20.24■□□□□ 0.83
DDR1-235ENST00000428153 OPLAHO14841 1288 aa20.24■□□□□ 0.83
DDR1-235ENST00000428153 CFBP00751 764 aa20.24■□□□□ 0.83
DDR1-235ENST00000428153 HOXD8P13378 290 aaPredicted RBP20.24■□□□□ 0.83
DDR1-235ENST00000428153 POU3F3P20264 500 aaPredicted RBP20.24■□□□□ 0.83
DDR1-235ENST00000428153 RABGGTBP53611 331 aa20.24■□□□□ 0.83
DDR1-235ENST00000428153 TTC22Q5TAA0 569 aa20.24■□□□□ 0.83
DDR1-235ENST00000428153 IL25Q9H293 177 aa20.24■□□□□ 0.83
DDR1-235ENST00000428153 MRVI1Q9Y6F6 885 aa20.24■□□□□ 0.83
DDR1-235ENST00000428153 BDP1A6H8Y1 2624 aa20.23■□□□□ 0.83
DDR1-235ENST00000428153 F2P00734 622 aa20.23■□□□□ 0.83
DDR1-235ENST00000428153 TGFB3P10600 412 aa20.23■□□□□ 0.83
DDR1-235ENST00000428153 GSPT1P15170 499 aaKnown RBP20.23■□□□□ 0.83
DDR1-235ENST00000428153 EIF2AK2P19525 551 aaKnown RBP20.23■□□□□ 0.83
DDR1-235ENST00000428153 CTAGE1Q96RT6 745 aa20.23■□□□□ 0.83
DDR1-235ENST00000428153 PDCD2LQ9BRP1 358 aa20.23■□□□□ 0.83
DDR1-235ENST00000428153 RIOX1Q9H6W3 641 aa20.23■□□□□ 0.83
DDR1-235ENST00000428153 GTF2IRD1Q9UHL9 959 aa20.23■□□□□ 0.83
DDR1-235ENST00000428153 PCDHA1Q9Y5I3 950 aa20.23■□□□□ 0.83
DDR1-235ENST00000428153 REV3LO60673 3130 aa20.22■□□□□ 0.83
DDR1-235ENST00000428153 KIF28PB7ZC32 967 aa20.22■□□□□ 0.83
DDR1-235ENST00000428153 PPFIA4O75335 1185 aa20.22■□□□□ 0.83
DDR1-235ENST00000428153 IGFBP4P22692 258 aa20.22■□□□□ 0.83
DDR1-235ENST00000428153 GDF6Q6KF10 455 aaPredicted RBP20.22■□□□□ 0.83
DDR1-235ENST00000428153 CYB5R4Q7L1T6 521 aa20.22■□□□□ 0.83
DDR1-235ENST00000428153 VSIG10LQ86VR7 867 aa20.22■□□□□ 0.83
DDR1-235ENST00000428153 TET1Q8NFU7 2136 aa20.22■□□□□ 0.83
DDR1-235ENST00000428153 YTHDC1Q96MU7 727 aaKnown RBP20.22■□□□□ 0.83
DDR1-235ENST00000428153 FTOQ9C0B1 505 aaKnown RBP eCLIP20.22■□□□□ 0.83
DDR1-235ENST00000428153 TSPYL2Q9H2G4 693 aaPredicted RBP20.22■□□□□ 0.83
DDR1-235ENST00000428153 TRIP12Q14669 1992 aaPredicted RBP20.21■□□□□ 0.83
DDR1-235ENST00000428153 ERICH2A1L162 156 aa20.21■□□□□ 0.83
DDR1-235ENST00000428153 HAS3O00219 553 aa20.21■□□□□ 0.83
DDR1-235ENST00000428153 PPP1R11O60927 126 aaPredicted RBP20.21■□□□□ 0.83
DDR1-235ENST00000428153 CYP21A2P08686 494 aa20.21■□□□□ 0.83
DDR1-235ENST00000428153 MYOGP15173 224 aa20.21■□□□□ 0.83
DDR1-235ENST00000428153 SELPP16109 830 aa20.21■□□□□ 0.83
DDR1-235ENST00000428153 MRPS5P82675 430 aaKnown RBP20.21■□□□□ 0.83
DDR1-235ENST00000428153 GRM4Q14833 912 aa20.21■□□□□ 0.83
DDR1-235ENST00000428153 SART3Q15020 963 aaKnown RBP20.21■□□□□ 0.83
DDR1-235ENST00000428153 DHX37Q8IY37 1157 aaKnown RBP20.21■□□□□ 0.83
DDR1-235ENST00000428153 C7orf31Q8N865 590 aa20.21■□□□□ 0.83
DDR1-235ENST00000428153 ASB2Q96Q27 587 aa20.21■□□□□ 0.83
DDR1-235ENST00000428153 CXCL10P02778 98 aa20.2■□□□□ 0.82
DDR1-235ENST00000428153 CA3P07451 260 aa20.2■□□□□ 0.82
DDR1-235ENST00000428153 PDE4AP27815 886 aa20.2■□□□□ 0.82
DDR1-235ENST00000428153 PSEN2P49810 448 aa20.2■□□□□ 0.82
DDR1-235ENST00000428153 PTK7Q13308 1070 aa20.2■□□□□ 0.82
DDR1-235ENST00000428153 LRRC8DQ7L1W4 858 aa20.2■□□□□ 0.82
DDR1-235ENST00000428153 CHST3Q7LGC8 479 aa20.2■□□□□ 0.82
DDR1-235ENST00000428153 HERC6Q8IVU3 1022 aa20.2■□□□□ 0.82
DDR1-235ENST00000428153 PPM1EQ8WY54 764 aa20.2■□□□□ 0.82
DDR1-235ENST00000428153 PRDM6Q9NQX0 595 aa20.2■□□□□ 0.82
DDR1-235ENST00000428153 GCOM1H8Y6P7 765 aaPredicted RBP20.19■□□□□ 0.82
DDR1-235ENST00000428153 EFCAB14O75071 495 aa20.19■□□□□ 0.82
DDR1-235ENST00000428153 RGS20O76081 388 aa20.19■□□□□ 0.82
DDR1-235ENST00000428153 POLR2MP0CAP2 368 aa20.19■□□□□ 0.82
DDR1-235ENST00000428153 CHMLP26374 656 aa20.19■□□□□ 0.82
DDR1-235ENST00000428153 KCNJ6P48051 423 aa20.19■□□□□ 0.82
DDR1-235ENST00000428153 TROAPQ12815 778 aa20.19■□□□□ 0.82
DDR1-235ENST00000428153 PGM5Q15124 567 aa20.19■□□□□ 0.82
DDR1-235ENST00000428153 CELF3Q5SZQ8 465 aaKnown RBP20.19■□□□□ 0.82
DDR1-235ENST00000428153 MYSM1Q5VVJ2 828 aa20.19■□□□□ 0.82
DDR1-235ENST00000428153 RALYLQ86SE5 291 aaKnown RBP20.19■□□□□ 0.82
DDR1-235ENST00000428153 NCOA7Q8NI08 942 aa20.19■□□□□ 0.82
DDR1-235ENST00000428153 HDAC6Q9UBN7 1215 aa20.19■□□□□ 0.82
DDR1-235ENST00000428153 PNMA6FA0A0J9YX94 578 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 TNFRSF10AO00220 468 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 IFIT3O14879 490 aaKnown RBP20.18■□□□□ 0.82
DDR1-235ENST00000428153 GTPBP6O43824 516 aaPredicted RBP20.18■□□□□ 0.82
DDR1-235ENST00000428153 STAM2O75886 525 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 CKBP12277 381 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 CCND2P30279 289 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 MFSD10Q14728 455 aa20.18■□□□□ 0.82
DDR1-235ENST00000428153 WTAPQ15007 396 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms