RNA–Protein interactions for RNA: ENST00000426343.5

HDLBP-212, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-212ENST00000426343 TMEM265A0A087WTH1 108 aa20.56■□□□□ 0.88
HDLBP-212ENST00000426343 CCDC69A6NI79 296 aa20.56■□□□□ 0.88
HDLBP-212ENST00000426343 MMP3P08254 477 aa20.56■□□□□ 0.88
HDLBP-212ENST00000426343 ACRP10323 421 aa20.56■□□□□ 0.88
HDLBP-212ENST00000426343 LAMC2Q13753 1193 aa20.56■□□□□ 0.88
HDLBP-212ENST00000426343 RNF20Q5VTR2 975 aa20.56■□□□□ 0.88
HDLBP-212ENST00000426343 NFXL1Q6ZNB6 911 aa20.56■□□□□ 0.88
HDLBP-212ENST00000426343 ZNF365Q70YC5 407 aa20.56■□□□□ 0.88
HDLBP-212ENST00000426343 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
HDLBP-212ENST00000426343 CALM1P0DP23 149 aa20.55■□□□□ 0.88
HDLBP-212ENST00000426343 CALM2P0DP24 149 aa20.55■□□□□ 0.88
HDLBP-212ENST00000426343 CALM3P0DP25 149 aa20.55■□□□□ 0.88
HDLBP-212ENST00000426343 MYCLP12524 364 aaPredicted RBP20.55■□□□□ 0.88
HDLBP-212ENST00000426343 CASTP20810 708 aaKnown RBP20.55■□□□□ 0.88
HDLBP-212ENST00000426343 CCL23P55773 120 aa20.55■□□□□ 0.88
HDLBP-212ENST00000426343 PGM5Q15124 567 aa20.55■□□□□ 0.88
HDLBP-212ENST00000426343 RPUSD2Q8IZ73 545 aaKnown RBP20.55■□□□□ 0.88
HDLBP-212ENST00000426343 HERVK_113Q902F9 699 aa20.55■□□□□ 0.88
HDLBP-212ENST00000426343 RRP36Q96EU6 259 aaKnown RBP20.55■□□□□ 0.88
HDLBP-212ENST00000426343 FAM161BQ96MY7 647 aa20.55■□□□□ 0.88
HDLBP-212ENST00000426343 MYL10Q9BUA6 226 aa20.55■□□□□ 0.88
HDLBP-212ENST00000426343 RGS20O76081 388 aa20.54■□□□□ 0.88
HDLBP-212ENST00000426343 FGBP02675 491 aa20.54■□□□□ 0.88
HDLBP-212ENST00000426343 TGFB3P10600 412 aa20.54■□□□□ 0.88
HDLBP-212ENST00000426343 DGKDQ16760 1214 aa20.54■□□□□ 0.88
HDLBP-212ENST00000426343 FAM47CQ5HY64 1035 aa20.54■□□□□ 0.88
HDLBP-212ENST00000426343 SLC17A8Q8NDX2 589 aa20.54■□□□□ 0.88
HDLBP-212ENST00000426343 WNT8AQ9H1J5 351 aa20.54■□□□□ 0.88
HDLBP-212ENST00000426343 MTIF3Q9H2K0 278 aaKnown RBP20.54■□□□□ 0.88
HDLBP-212ENST00000426343 CYP2C9P11712 490 aa20.53■□□□□ 0.88
HDLBP-212ENST00000426343 CCND2P30279 289 aa20.53■□□□□ 0.88
HDLBP-212ENST00000426343 COL9A3Q14050 684 aaPredicted RBP20.53■□□□□ 0.88
HDLBP-212ENST00000426343 SESTD1Q86VW0 696 aa20.53■□□□□ 0.88
HDLBP-212ENST00000426343 SGMS1Q86VZ5 419 aa20.53■□□□□ 0.88
HDLBP-212ENST00000426343 FCHSD1Q86WN1 690 aa20.53■□□□□ 0.88
HDLBP-212ENST00000426343 DHX37Q8IY37 1157 aaKnown RBP20.53■□□□□ 0.88
HDLBP-212ENST00000426343 PPTC7Q8NI37 304 aa20.53■□□□□ 0.88
HDLBP-212ENST00000426343 PIBF1Q8WXW3 757 aa20.53■□□□□ 0.88
HDLBP-212ENST00000426343 CDX2Q99626 313 aaPredicted RBP20.53■□□□□ 0.88
HDLBP-212ENST00000426343 TTYH1Q9H313 450 aaPredicted RBP20.53■□□□□ 0.88
HDLBP-212ENST00000426343 SLC12A7Q9Y666 1083 aa20.53■□□□□ 0.88
HDLBP-212ENST00000426343 COL6A3P12111 3177 aa20.52■□□□□ 0.88
HDLBP-212ENST00000426343 CDC45O75419 566 aa20.52■□□□□ 0.88
HDLBP-212ENST00000426343 TSGA10IPQ3SY00 556 aa20.52■□□□□ 0.88
HDLBP-212ENST00000426343 SRBD1Q8N5C6 995 aaKnown RBP20.52■□□□□ 0.88
HDLBP-212ENST00000426343 IL31RAQ8NI17 732 aa20.52■□□□□ 0.88
HDLBP-212ENST00000426343 KAT2BQ92831 832 aa20.52■□□□□ 0.88
HDLBP-212ENST00000426343 SEC63Q9UGP8 760 aaKnown RBP20.52■□□□□ 0.88
HDLBP-212ENST00000426343 PIK3CDO00329 1044 aa20.51■□□□□ 0.87
HDLBP-212ENST00000426343 PPFIA4O75335 1185 aa20.51■□□□□ 0.87
HDLBP-212ENST00000426343 STAM2O75886 525 aa20.51■□□□□ 0.87
HDLBP-212ENST00000426343 PLEKHA8P1O95397 391 aa20.51■□□□□ 0.87
HDLBP-212ENST00000426343 HOXD8P13378 290 aaPredicted RBP20.51■□□□□ 0.87
HDLBP-212ENST00000426343 DNAJB2P25686 324 aa20.51■□□□□ 0.87
HDLBP-212ENST00000426343 CELF3Q5SZQ8 465 aaKnown RBP20.51■□□□□ 0.87
HDLBP-212ENST00000426343 MYSM1Q5VVJ2 828 aa20.51■□□□□ 0.87
HDLBP-212ENST00000426343 FANCBQ8NB91 859 aa20.51■□□□□ 0.87
HDLBP-212ENST00000426343 NEK1Q96PY6 1258 aa20.51■□□□□ 0.87
HDLBP-212ENST00000426343 FRMPD4Q14CM0 1322 aa20.51■□□□□ 0.87
HDLBP-212ENST00000426343 PITPNM1O00562 1244 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 PFKMP08237 780 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 RFC2P35250 354 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 BFSP2Q13515 415 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 SYNE3Q6ZMZ3 975 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 RETREG2Q8NC44 543 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 CUL5Q93034 780 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 VWCEQ96DN2 955 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 SCLYQ96I15 445 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 KATNAL1Q9BW62 490 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 LRRC2Q9BYS8 371 aa20.5■□□□□ 0.87
HDLBP-212ENST00000426343 CXXC1Q9P0U4 656 aaPredicted RBP20.5■□□□□ 0.87
HDLBP-212ENST00000426343 RXRAP19793 462 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 CHMP4BP1P59074 171 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 EXOSC10Q01780 885 aaKnown RBP20.49■□□□□ 0.87
HDLBP-212ENST00000426343 SP2Q02086 613 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 PTGISQ16647 500 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 GNPTABQ3T906 1256 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 DHX32Q7L7V1 743 aaKnown RBP20.49■□□□□ 0.87
HDLBP-212ENST00000426343 OTOP2Q7RTS6 562 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 SMARCC2Q8TAQ2 1214 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 PPP1R13LQ8WUF5 828 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 TIFAQ96CG3 184 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 CCDC136Q96JN2 1154 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 SPATA33Q96N06 139 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 NOD1Q9Y239 953 aa20.49■□□□□ 0.87
HDLBP-212ENST00000426343 SCN10AQ9Y5Y9 1956 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 GRXCR1A8MXD5 290 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 MEIS2O14770 477 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 GGPS1O95749 300 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 F2P00734 622 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 IQCF3P0C7M6 154 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 UBA1P22314 1058 aaKnown RBP20.48■□□□□ 0.87
HDLBP-212ENST00000426343 ICAM3P32942 547 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 PSEN2P49810 448 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 MRPS9P82933 396 aaKnown RBP20.48■□□□□ 0.87
HDLBP-212ENST00000426343 KRT32Q14532 448 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 XRRA1Q6P2D8 792 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 USP17L6PQ6QN14 398 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 TMTC3Q6ZXV5 915 aa20.48■□□□□ 0.87
HDLBP-212ENST00000426343 CMTR1Q8N1G2 835 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms