RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 HAS3O00219 553 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 LPXNO60711 386 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 GH1P01241 217 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 MRPL12P52815 198 aaKnown RBP17.52■□□□□ 0.4
ATG4B-209ENST00000425239 MFAP1P55081 439 aaKnown RBP17.52■□□□□ 0.4
ATG4B-209ENST00000425239 TFF2Q03403 129 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 BFSP2Q13515 415 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 AAMPQ13685 434 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 CCDC178Q5BJE1 867 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 KRT40Q6A162 431 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 TRAF7Q6Q0C0 670 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 STAG2Q8N3U4 1231 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 RETREG2Q8NC44 543 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 MTMR8Q96EF0 704 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 RMDN3Q96TC7 470 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 DSCC1Q9BVC3 393 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 CERS4Q9HA82 394 aa17.52■□□□□ 0.4
ATG4B-209ENST00000425239 PPP1R11O60927 126 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-209ENST00000425239 CXCL10P02778 98 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 ACTN1P12814 892 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 HOXD8P13378 290 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-209ENST00000425239 HSD17B4P51659 736 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 HIC1Q14526 733 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 SEC23AQ15436 765 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 STXBP2Q15833 593 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 SLC35G1Q2M3R5 365 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 ASPRV1Q53RT3 343 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 IQCA1Q86XH1 822 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 AFAP1L1Q8TED9 768 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 GTF2IRD1Q9UHL9 959 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 MYH6P13533 1939 aa17.51■□□□□ 0.39
ATG4B-209ENST00000425239 NBNO60934 754 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 EIF3JO75822 258 aaKnown RBP17.5■□□□□ 0.39
ATG4B-209ENST00000425239 BAIAP3O94812 1187 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 NR3C2P08235 984 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 TRIM71Q2Q1W2 868 aaKnown RBP17.5■□□□□ 0.39
ATG4B-209ENST00000425239 STOX1Q6ZVD7 989 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 FBXO11Q86XK2 927 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 MCF2L2Q86YR7 1114 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 CAGE1Q8TC20 777 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 WNT8BQ93098 351 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 UHRF1Q96T88 793 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-209ENST00000425239 VAT1LQ9HCJ6 419 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 PXMP2Q9NR77 195 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 MYH7BA7E2Y1 1941 aa17.5■□□□□ 0.39
ATG4B-209ENST00000425239 LCHNA4D1U4 455 aa17.49■□□□□ 0.39
ATG4B-209ENST00000425239 CKBP12277 381 aa17.49■□□□□ 0.39
ATG4B-209ENST00000425239 SELPP16109 830 aa17.49■□□□□ 0.39
ATG4B-209ENST00000425239 CASTP20810 708 aaKnown RBP17.49■□□□□ 0.39
ATG4B-209ENST00000425239 COL9A1P20849 921 aa17.49■□□□□ 0.39
ATG4B-209ENST00000425239 KCNQ1P51787 676 aa17.49■□□□□ 0.39
ATG4B-209ENST00000425239 WDR5P61964 334 aaKnown RBP17.49■□□□□ 0.39
ATG4B-209ENST00000425239 CHST3Q7LGC8 479 aa17.49■□□□□ 0.39
ATG4B-209ENST00000425239 TMCO2Q7Z6W1 182 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-209ENST00000425239 NECAB3Q96P71 396 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-209ENST00000425239 FTOQ9C0B1 505 aaKnown RBP eCLIP17.49■□□□□ 0.39
ATG4B-209ENST00000425239 RWDD1Q9H446 243 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-209ENST00000425239 HDAC6Q9UBN7 1215 aa17.49■□□□□ 0.39
ATG4B-209ENST00000425239 MAD2L2Q9UI95 211 aa17.49■□□□□ 0.39
ATG4B-209ENST00000425239 MRPL11Q9Y3B7 192 aaKnown RBP17.49■□□□□ 0.39
ATG4B-209ENST00000425239 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-209ENST00000425239 F2P00734 622 aa17.48■□□□□ 0.39
ATG4B-209ENST00000425239 PARP1P09874 1014 aaKnown RBP17.48■□□□□ 0.39
ATG4B-209ENST00000425239 EIF2AK2P19525 551 aaKnown RBP17.48■□□□□ 0.39
ATG4B-209ENST00000425239 SP2Q02086 613 aa17.48■□□□□ 0.39
ATG4B-209ENST00000425239 MKRN4PQ13434 485 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-209ENST00000425239 MBTPS1Q14703 1052 aa17.48■□□□□ 0.39
ATG4B-209ENST00000425239 DGKDQ16760 1214 aa17.48■□□□□ 0.39
ATG4B-209ENST00000425239 MYSM1Q5VVJ2 828 aa17.48■□□□□ 0.39
ATG4B-209ENST00000425239 CYB5R4Q7L1T6 521 aa17.48■□□□□ 0.39
ATG4B-209ENST00000425239 VSIG10LQ86VR7 867 aa17.48■□□□□ 0.39
ATG4B-209ENST00000425239 PSEN2P49810 448 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 DEFB103AP81534 67 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 GRB10Q13322 594 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 LAMC2Q13753 1193 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 ARHGEF16Q5VV41 709 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 LRRC8DQ7L1W4 858 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 MICALL1Q8N3F8 863 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 PPTC7Q8NI37 304 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 ARNTL2Q8WYA1 636 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 PDCD2LQ9BRP1 358 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 MAP3K20Q9NYL2 800 aaKnown RBP17.47■□□□□ 0.39
ATG4B-209ENST00000425239 RAPGEFL1Q9UHV5 662 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 NOD1Q9Y239 953 aa17.47■□□□□ 0.39
ATG4B-209ENST00000425239 KLRF2D3W0D1 207 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 TLL1O43897 1013 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 PPFIA4O75335 1185 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 CFBP00751 764 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 CHMP4BP1P59074 171 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 ZNF200P98182 395 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-209ENST00000425239 IMMTQ16891 758 aaKnown RBP17.46■□□□□ 0.39
ATG4B-209ENST00000425239 HSDL1Q3SXM5 330 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 IL31RAQ8NI17 732 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 AMNQ9BXJ7 453 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 KRT23Q9C075 422 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 TSPYL2Q9H2G4 693 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-209ENST00000425239 BCAS3Q9H6U6 928 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 DIAPH3Q9NSV4 1193 aa17.46■□□□□ 0.39
ATG4B-209ENST00000425239 KIF28PB7ZC32 967 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms