RNA–Protein interactions for RNA: ENST00000421398.5

C1orf228-204, Transcript of Uncharacterized protein C1orf228, human

TSL 3

Gene C1orf228, Length 564 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-204	ENST00000421398	CYP2C18	P33260	490 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	LIFR	P42702	1097 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	GNAQ	P50148	359 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	PTPN11	Q06124	597 aa	Predicted RBP	12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	ARHGAP1	Q07960	439 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	PGM5	Q15124	567 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	LY6K	Q17RY6	165 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	NBPF20	Q3BBV1	942 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	FAM47C	Q5HY64	1035 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	KCNV1	Q6PIU1	500 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	EMID1	Q96A84	441 aa	Predicted RBP	12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	RRP36	Q96EU6	259 aa	Known RBP	12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	MYL10	Q9BUA6	226 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	MTIF3	Q9H2K0	278 aa	Known RBP	12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	IL23A	Q9NPF7	189 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	SEC63	Q9UGP8	760 aa	Known RBP	12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	MRVI1	Q9Y6F6	885 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	FRMPD4	Q14CM0	1322 aa		12.84	□□□□□ -0.35
C1orf228-204	ENST00000421398	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	CCND2	P30279	289 aa		12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	TMEM240	Q5SV17	173 aa		12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	RASIP1	Q5U651	963 aa		12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	AFG1L	Q8WV93	481 aa		12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	GUCD1	Q96NT3	240 aa		12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	WNT8A	Q9H1J5	351 aa		12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	TRMT13	Q9NUP7	481 aa	Known RBP	12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	PTPRS	Q13332	1948 aa		12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	UMODL1	Q5DID0	1318 aa		12.83	□□□□□ -0.36
C1orf228-204	ENST00000421398	STAM2	O75886	525 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	PFKM	P08237	780 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	MYCL	P12524	364 aa	Predicted RBP	12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	CAST	P20810	708 aa	Known RBP	12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	DNAJB2	P25686	324 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	LAMC2	Q13753	1193 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	DGKD	Q16760	1214 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	ZNF365	Q70YC5	407 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	C16orf59	Q7L2K0	433 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	SGMS1	Q86VZ5	419 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	SKAP1	Q86WV1	359 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	PPTC7	Q8NI37	304 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	FAM161B	Q96MY7	647 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	KATNAL1	Q9BW62	490 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	DDX41	Q9UJV9	622 aa	Known RBP	12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	SLC12A7	Q9Y666	1083 aa		12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	LAMA2	P24043	3122 aa	Known RBP	12.82	□□□□□ -0.36
C1orf228-204	ENST00000421398	KAT6A	Q92794	2004 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	PITPNM1	O00562	1244 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	RGS20	O76081	388 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	PLEKHA8P1	O95397	391 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	ACR	P10323	421 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	TGFB3	P10600	412 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	CYP2C9	P11712	490 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	RFC2	P35250	354 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	CCL23	P55773	120 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	GNPTAB	Q3T906	1256 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	VSIG10L	Q86VR7	867 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	SESTD1	Q86VW0	696 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	FCHSD1	Q86WN1	690 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	DHX37	Q8IY37	1157 aa	Known RBP	12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	RPUSD2	Q8IZ73	545 aa	Known RBP	12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	CCDC155	Q8N6L0	562 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	IL31RA	Q8NI17	732 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	SMARCC2	Q8TAQ2	1214 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	PIBF1	Q8WXW3	757 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	HERVK_113	Q902F9	699 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	CUL5	Q93034	780 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	CCDC136	Q96JN2	1154 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	NOD1	Q9Y239	953 aa		12.81	□□□□□ -0.36
C1orf228-204	ENST00000421398	PIK3CD	O00329	1044 aa		12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	F2	P00734	622 aa		12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	FGB	P02675	491 aa		12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	HOXD8	P13378	290 aa	Predicted RBP	12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	UBA1	P22314	1058 aa	Known RBP	12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	BFSP2	Q13515	415 aa		12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	KRT32	Q14532	448 aa		12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	TMTC3	Q6ZXV5	915 aa		12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	MICU3	Q86XE3	530 aa		12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	NEK1	Q96PY6	1258 aa		12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	TTYH1	Q9H313	450 aa	Predicted RBP	12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	SEMA6B	Q9H3T3	888 aa		12.8	□□□□□ -0.36
C1orf228-204	ENST00000421398	COL6A3	P12111	3177 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	TET1	Q8NFU7	2136 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	GGPS1	O95749	300 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	ZNF286B	P0CG31	522 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	RXRA	P19793	462 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	CHMP4BP1	P59074	171 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	COL9A3	Q14050	684 aa	Predicted RBP	12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	RAB30	Q15771	203 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	PTGIS	Q16647	500 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	TSGA10IP	Q3SY00	556 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	CELF3	Q5SZQ8	465 aa	Known RBP	12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	MYSM1	Q5VVJ2	828 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	XRRA1	Q6P2D8	792 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	APOA5	Q6Q788	366 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	SYNE3	Q6ZMZ3	975 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	SRBD1	Q8N5C6	995 aa	Known RBP	12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	SLC17A8	Q8NDX2	589 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	CAGE1	Q8TC20	777 aa		12.79	□□□□□ -0.36
C1orf228-204	ENST00000421398	KAT2B	Q92831	832 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms