RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 IFIT3O14879 490 aaKnown RBP20.17■□□□□ 0.82
MSH6-203ENST00000420813 SGSM2O43147 1006 aa20.17■□□□□ 0.82
MSH6-203ENST00000420813 PPP1R11O60927 126 aaPredicted RBP20.17■□□□□ 0.82
MSH6-203ENST00000420813 CASTP20810 708 aaKnown RBP20.17■□□□□ 0.82
MSH6-203ENST00000420813 BFSP2Q13515 415 aa20.17■□□□□ 0.82
MSH6-203ENST00000420813 SART3Q15020 963 aaKnown RBP20.17■□□□□ 0.82
MSH6-203ENST00000420813 STOX1Q6ZVD7 989 aa20.17■□□□□ 0.82
MSH6-203ENST00000420813 RALYLQ86SE5 291 aaKnown RBP20.17■□□□□ 0.82
MSH6-203ENST00000420813 RETREG2Q8NC44 543 aa20.17■□□□□ 0.82
MSH6-203ENST00000420813 NCOA7Q8NI08 942 aa20.17■□□□□ 0.82
MSH6-203ENST00000420813 PDCD2LQ9BRP1 358 aa20.17■□□□□ 0.82
MSH6-203ENST00000420813 RIOX1Q9H6W3 641 aa20.17■□□□□ 0.82
MSH6-203ENST00000420813 SLC28A3Q9HAS3 691 aa20.17■□□□□ 0.82
MSH6-203ENST00000420813 NOD1Q9Y239 953 aa20.17■□□□□ 0.82
MSH6-203ENST00000420813 CHD7Q9P2D1 2997 aa20.17■□□□□ 0.82
MSH6-203ENST00000420813 ZBBXA8MT70 800 aa20.16■□□□□ 0.82
MSH6-203ENST00000420813 E7EWF7 191 aa20.16■□□□□ 0.82
MSH6-203ENST00000420813 IQCF3P0C7M6 154 aa20.16■□□□□ 0.82
MSH6-203ENST00000420813 ACTN1P12814 892 aa20.16■□□□□ 0.82
MSH6-203ENST00000420813 WTAPQ15007 396 aa20.16■□□□□ 0.82
MSH6-203ENST00000420813 DGKDQ16760 1214 aa20.16■□□□□ 0.82
MSH6-203ENST00000420813 NKX2-4Q9H2Z4 354 aa20.16■□□□□ 0.82
MSH6-203ENST00000420813 PRDM12Q9H4Q4 367 aa20.16■□□□□ 0.82
MSH6-203ENST00000420813 YBX2Q9Y2T7 364 aaKnown RBP20.16■□□□□ 0.82
MSH6-203ENST00000420813 PCDHA11Q9Y5I1 949 aa20.16■□□□□ 0.82
MSH6-203ENST00000420813 MRVI1Q9Y6F6 885 aa20.16■□□□□ 0.82
MSH6-203ENST00000420813 ATP2A2P16615 1042 aaKnown RBP20.15■□□□□ 0.82
MSH6-203ENST00000420813 TROAPQ12815 778 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 LAMC2Q13753 1193 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 PTGISQ16647 500 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 SLC35G1Q2M3R5 365 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 KCNV1Q6PIU1 500 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 CHST3Q7LGC8 479 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 DEFB128Q7Z7B8 93 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 CCDC155Q8N6L0 562 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 CAGE1Q8TC20 777 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 PPP1R13LQ8WUF5 828 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 KAT2BQ92831 832 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 KATNAL1Q9BW62 490 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 VCANP13611 3396 aa20.15■□□□□ 0.82
MSH6-203ENST00000420813 PTPRSQ13332 1948 aa20.14■□□□□ 0.81
MSH6-203ENST00000420813 HOMER1Q86YM7 354 aa20.14■□□□□ 0.81
MSH6-203ENST00000420813 USP38Q8NB14 1042 aa20.14■□□□□ 0.81
MSH6-203ENST00000420813 PPTC7Q8NI37 304 aa20.14■□□□□ 0.81
MSH6-203ENST00000420813 MAP4K1Q92918 833 aa20.14■□□□□ 0.81
MSH6-203ENST00000420813 PIGSQ96S52 555 aa20.14■□□□□ 0.81
MSH6-203ENST00000420813 TAF6LQ9Y6J9 622 aa20.14■□□□□ 0.81
MSH6-203ENST00000420813 PNMA6FA0A0J9YX94 578 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 CYTH3O43739 400 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 RGS20O76081 388 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 F2P00734 622 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 HOXD8P13378 290 aaPredicted RBP20.13■□□□□ 0.81
MSH6-203ENST00000420813 CHMP4BP1P59074 171 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 PGM5Q15124 567 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 GDF6Q6KF10 455 aaPredicted RBP20.13■□□□□ 0.81
MSH6-203ENST00000420813 CATIPQ7Z7H3 387 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 VSIG10LQ86VR7 867 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 DHX37Q8IY37 1157 aaKnown RBP20.13■□□□□ 0.81
MSH6-203ENST00000420813 AFAP1L1Q8TED9 768 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 CTAGE1Q96RT6 745 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 SLC9A7Q96T83 725 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 SENP2Q9HC62 589 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 GTF2IRD1Q9UHL9 959 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 TTC28Q96AY4 2481 aa20.13■□□□□ 0.81
MSH6-203ENST00000420813 GCOM1H8Y6P7 765 aaPredicted RBP20.12■□□□□ 0.81
MSH6-203ENST00000420813 POLR2MP0CAP2 368 aa20.12■□□□□ 0.81
MSH6-203ENST00000420813 MYCLP12524 364 aaPredicted RBP20.12■□□□□ 0.81
MSH6-203ENST00000420813 HOXA13P31271 388 aaPredicted RBP20.12■□□□□ 0.81
MSH6-203ENST00000420813 RABGGTBP53611 331 aa20.12■□□□□ 0.81
MSH6-203ENST00000420813 RBL2Q08999 1139 aa20.12■□□□□ 0.81
MSH6-203ENST00000420813 TMEM67Q5HYA8 995 aa20.12■□□□□ 0.81
MSH6-203ENST00000420813 PPP2R2DQ66LE6 453 aa20.12■□□□□ 0.81
MSH6-203ENST00000420813 MB21D2Q8IYB1 491 aaPredicted RBP20.12■□□□□ 0.81
MSH6-203ENST00000420813 PHOSPHO2Q8TCD6 241 aa20.12■□□□□ 0.81
MSH6-203ENST00000420813 MAP3K14Q99558 947 aa20.12■□□□□ 0.81
MSH6-203ENST00000420813 MTA3Q9BTC8 594 aa20.12■□□□□ 0.81
MSH6-203ENST00000420813 TRANK1O15050 2925 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 HAS3O00219 553 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 BAIAP3O94812 1187 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 PARNO95453 639 aaKnown RBP20.11■□□□□ 0.81
MSH6-203ENST00000420813 TGFB3P10600 412 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 CCND2P30279 289 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 PSEN2P49810 448 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 ANTXR2P58335 489 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 IRX6P78412 446 aaPredicted RBP20.11■□□□□ 0.81
MSH6-203ENST00000420813 ADGRE1Q14246 886 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 MYSM1Q5VVJ2 828 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 C7orf31Q8N865 590 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 IGDCC4Q8TDY8 1250 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 SYMPKQ92797 1274 aaKnown RBP20.11■□□□□ 0.81
MSH6-203ENST00000420813 FTOQ9C0B1 505 aaKnown RBP eCLIP20.11■□□□□ 0.81
MSH6-203ENST00000420813 RBM8AQ9Y5S9 174 aaKnown RBP20.11■□□□□ 0.81
MSH6-203ENST00000420813 DOCK5Q9H7D0 1870 aa20.11■□□□□ 0.81
MSH6-203ENST00000420813 FRMPD4Q14CM0 1322 aa20.1■□□□□ 0.81
MSH6-203ENST00000420813 PPFIA4O75335 1185 aa20.1■□□□□ 0.81
MSH6-203ENST00000420813 MFSD10Q14728 455 aa20.1■□□□□ 0.81
MSH6-203ENST00000420813 CELF3Q5SZQ8 465 aaKnown RBP20.1■□□□□ 0.81
MSH6-203ENST00000420813 IL31RAQ8NI17 732 aa20.1■□□□□ 0.81
MSH6-203ENST00000420813 DHX38Q92620 1227 aaKnown RBP20.1■□□□□ 0.81
MSH6-203ENST00000420813 HDAC6Q9UBN7 1215 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms