RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 KLHL6Q8WZ60 621 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 DVL3Q92997 716 aaPredicted RBP5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 SORCS2Q96PQ0 1159 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 SRRDQ9UH36 339 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 SLC12A7Q9Y666 1083 aa5.23□□□□□ -1.57
SDCBPP3-201ENST00000419629 SGSM2O43147 1006 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 NASPP49321 788 aaPredicted RBP5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 CDSNQ15517 529 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 BORAQ6PGQ7 559 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 CD300LDQ6UXZ3 194 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 LIMS2Q7Z4I7 341 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 STK32CQ86UX6 486 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 DCP2Q8IU60 420 aaKnown RBP5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 TTLL6Q8N841 843 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 C19orf47Q8N9M1 422 aaKnown RBP5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 CHST13Q8NET6 341 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 COPS5Q92905 334 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 MMP19Q99542 508 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 CLEC1BQ9P126 229 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 ST6GALNAC2Q9UJ37 374 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 SUGT1Q9Y2Z0 365 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 ZNF536O15090 1300 aa5.22□□□□□ -1.57
SDCBPP3-201ENST00000419629 DDX3XO00571 662 aaKnown RBP eCLIP5.21□□□□□ -1.58
SDCBPP3-201ENST00000419629 PLS3P13797 630 aa5.21□□□□□ -1.58
SDCBPP3-201ENST00000419629 GIPRP48546 466 aa5.21□□□□□ -1.58
SDCBPP3-201ENST00000419629 ITGA1P56199 1179 aa5.21□□□□□ -1.58
SDCBPP3-201ENST00000419629 GLB1LQ6UWU2 654 aa5.21□□□□□ -1.58
SDCBPP3-201ENST00000419629 SPRED1Q7Z699 444 aa5.21□□□□□ -1.58
SDCBPP3-201ENST00000419629 Q8N1X5 172 aa5.21□□□□□ -1.58
SDCBPP3-201ENST00000419629 SCAND2PQ9GZW5 306 aaPredicted RBP5.21□□□□□ -1.58
SDCBPP3-201ENST00000419629 AP5M1Q9H0R1 490 aa5.21□□□□□ -1.58
SDCBPP3-201ENST00000419629 GPRC5CQ9NQ84 441 aa5.21□□□□□ -1.58
SDCBPP3-201ENST00000419629 B4GALT3O60512 393 aa5.2□□□□□ -1.58
SDCBPP3-201ENST00000419629 SSBP05455 408 aaKnown RBP eCLIP5.2□□□□□ -1.58
SDCBPP3-201ENST00000419629 C6P13671 934 aa5.2□□□□□ -1.58
SDCBPP3-201ENST00000419629 ZC3H6P61129 1189 aaKnown RBP5.2□□□□□ -1.58
SDCBPP3-201ENST00000419629 ARID5AQ03989 594 aa5.2□□□□□ -1.58
SDCBPP3-201ENST00000419629 MARCH2Q9P0N8 246 aa5.2□□□□□ -1.58
SDCBPP3-201ENST00000419629 PPP4R1LQ9P1A2 415 aa5.2□□□□□ -1.58
SDCBPP3-201ENST00000419629 APEX2Q9UBZ4 518 aa5.2□□□□□ -1.58
SDCBPP3-201ENST00000419629 THBDP07204 575 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 ATF4P18848 351 aaPredicted RBP5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 TACR2P21452 398 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 SLC6A11P48066 632 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 INF2Q27J81 1249 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 ZC3H18Q86VM9 953 aaKnown RBP5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 TEX2Q8IWB9 1127 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 FAM126BQ8IXS8 530 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 SH3RF3Q8TEJ3 882 aaPredicted RBP5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 SEC14L1Q92503 715 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 LCORQ96JN0 433 aaPredicted RBP5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 YIPF4Q9BSR8 244 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 IGSF5Q9NSI5 407 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 AKT3Q9Y243 479 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 EMC9Q9Y3B6 208 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 TSC22D4Q9Y3Q8 395 aa5.19□□□□□ -1.58
SDCBPP3-201ENST00000419629 C9orf118A6NHY6 69 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 C22orf46C9J442 243 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 KCNH1O95259 989 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 SLPIP03973 132 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 ACVRL1P37023 503 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 STAT5AP42229 794 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 SCRN1Q12765 414 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 ADAM9Q13443 819 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 ICAM4Q14773 271 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 CR1LQ2VPA4 569 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 CRIP3Q6Q6R5 217 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 SLC43A3Q8NBI5 491 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 CD248Q9HCU0 757 aa5.18□□□□□ -1.58
SDCBPP3-201ENST00000419629 ANKRD34BA5PLL1 514 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 LAMTOR5O43504 91 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 ZNF28P17035 718 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 CYP4F3Q08477 520 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 SURF1Q15526 300 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 TNNI3KQ59H18 835 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 KIAA1211LQ6NV74 962 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 MILR1Q7Z6M3 343 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 RIOX2Q8IUF8 465 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 KISS1RQ969F8 398 aaPredicted RBP5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 ANAPC16Q96DE5 110 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 MBD6Q96DN6 1003 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 TINF2Q9BSI4 451 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 BTG4Q9NY30 223 aa5.17□□□□□ -1.58
SDCBPP3-201ENST00000419629 GPR42O15529 346 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 FPR2P25090 351 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 DNAJA1P31689 397 aaKnown RBP5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 IL13P35225 146 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 GDF5P43026 501 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 HMGA2P52926 109 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 CASP7P55210 303 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 PPP2R5EQ16537 467 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 MROH9Q5TGP6 573 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 Q8N1Y9 231 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 CRACR2BQ8N4Y2 399 aaPredicted RBP5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 DNERQ8NFT8 737 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 NPLOC4Q8TAT6 608 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 FRS2Q8WU20 508 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 SHDQ96IW2 340 aa5.16□□□□□ -1.58
SDCBPP3-201ENST00000419629 KRTAP9-8Q9BYQ0 159 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms