RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ADAMTS3O15072 1205 aa21.41■■□□□ 1.02
PTCD3-204ENST00000418628 EIF3JO75822 258 aaKnown RBP21.41■■□□□ 1.02
PTCD3-204ENST00000418628 CD2BP2O95400 341 aaKnown RBP21.41■■□□□ 1.02
PTCD3-204ENST00000418628 FDPSP14324 419 aaKnown RBP21.41■■□□□ 1.02
PTCD3-204ENST00000418628 MRPS9P82933 396 aaKnown RBP21.41■■□□□ 1.02
PTCD3-204ENST00000418628 TNFAIP2Q03169 654 aa21.41■■□□□ 1.02
PTCD3-204ENST00000418628 LRRC41Q15345 812 aa21.41■■□□□ 1.02
PTCD3-204ENST00000418628 NPY5RQ15761 445 aa21.41■■□□□ 1.02
PTCD3-204ENST00000418628 PCNX4Q63HM2 1172 aa21.41■■□□□ 1.02
PTCD3-204ENST00000418628 CCDC62Q6P9F0 684 aa21.41■■□□□ 1.02
PTCD3-204ENST00000418628 CCDC148Q8NFR7 591 aa21.41■■□□□ 1.02
PTCD3-204ENST00000418628 SCFD2Q8WU76 684 aa21.41■■□□□ 1.02
PTCD3-204ENST00000418628 MYH9P35579 1960 aaKnown RBP21.41■■□□□ 1.02
PTCD3-204ENST00000418628 ARIH2O95376 493 aa21.4■■□□□ 1.02
PTCD3-204ENST00000418628 PTGS1P23219 599 aa21.4■■□□□ 1.02
PTCD3-204ENST00000418628 CCND2P30279 289 aa21.4■■□□□ 1.02
PTCD3-204ENST00000418628 AP3B2Q13367 1082 aa21.4■■□□□ 1.02
PTCD3-204ENST00000418628 XRRA1Q6P2D8 792 aa21.4■■□□□ 1.02
PTCD3-204ENST00000418628 CRYGNQ8WXF5 182 aa21.4■■□□□ 1.02
PTCD3-204ENST00000418628 ZSCAN31Q96LW9 406 aaPredicted RBP21.4■■□□□ 1.02
PTCD3-204ENST00000418628 AIFM3Q96NN9 605 aa21.4■■□□□ 1.02
PTCD3-204ENST00000418628 INPP4AQ96PE3 977 aaPredicted RBP21.4■■□□□ 1.02
PTCD3-204ENST00000418628 SH2B1Q9NRF2 756 aaPredicted RBP21.4■■□□□ 1.02
PTCD3-204ENST00000418628 VPS54Q9P1Q0 977 aa21.4■■□□□ 1.02
PTCD3-204ENST00000418628 KAT6AQ92794 2004 aa21.39■■□□□ 1.02
PTCD3-204ENST00000418628 TRIP12Q14669 1992 aaPredicted RBP21.39■■□□□ 1.02
PTCD3-204ENST00000418628 MYADML2A6NDP7 307 aa21.39■■□□□ 1.01
PTCD3-204ENST00000418628 STAM2O75886 525 aa21.39■■□□□ 1.01
PTCD3-204ENST00000418628 PGK1P00558 417 aa21.39■■□□□ 1.01
PTCD3-204ENST00000418628 TLK2Q86UE8 772 aa21.39■■□□□ 1.01
PTCD3-204ENST00000418628 DAGLBQ8NCG7 672 aa21.39■■□□□ 1.01
PTCD3-204ENST00000418628 ARRDC4Q8NCT1 418 aa21.39■■□□□ 1.01
PTCD3-204ENST00000418628 PAWRQ96IZ0 340 aaKnown RBP21.39■■□□□ 1.01
PTCD3-204ENST00000418628 WDR11Q9BZH6 1224 aa21.39■■□□□ 1.01
PTCD3-204ENST00000418628 PCDHA6Q9UN73 950 aa21.39■■□□□ 1.01
PTCD3-204ENST00000418628 PCDHA8Q9Y5H6 950 aa21.39■■□□□ 1.01
PTCD3-204ENST00000418628 M0R2N6 131 aa21.38■■□□□ 1.01
PTCD3-204ENST00000418628 NKRFO15226 690 aaKnown RBP eCLIP21.38■■□□□ 1.01
PTCD3-204ENST00000418628 ST18O60284 1047 aa21.38■■□□□ 1.01
PTCD3-204ENST00000418628 FOSP01100 380 aaPredicted RBP21.38■■□□□ 1.01
PTCD3-204ENST00000418628 IRX5P78411 483 aaPredicted RBP21.38■■□□□ 1.01
PTCD3-204ENST00000418628 GJC2Q5T442 439 aaPredicted RBP21.38■■□□□ 1.01
PTCD3-204ENST00000418628 ANO3Q9BYT9 981 aa21.38■■□□□ 1.01
PTCD3-204ENST00000418628 C6orf50Q9HD87 102 aa21.38■■□□□ 1.01
PTCD3-204ENST00000418628 PHF24Q9UPV7 400 aa21.38■■□□□ 1.01
PTCD3-204ENST00000418628 SPDYE3A6NKU9 549 aa21.37■■□□□ 1.01
PTCD3-204ENST00000418628 MYCLP12524 364 aaPredicted RBP21.37■■□□□ 1.01
PTCD3-204ENST00000418628 GNA11P29992 359 aa21.37■■□□□ 1.01
PTCD3-204ENST00000418628 ICAM3P32942 547 aa21.37■■□□□ 1.01
PTCD3-204ENST00000418628 SREBF1P36956 1147 aa21.37■■□□□ 1.01
PTCD3-204ENST00000418628 SEMA3FQ13275 785 aa21.37■■□□□ 1.01
PTCD3-204ENST00000418628 TTLL4Q14679 1199 aa21.37■■□□□ 1.01
PTCD3-204ENST00000418628 NECAB2Q7Z6G3 386 aa21.37■■□□□ 1.01
PTCD3-204ENST00000418628 TSEN34Q9BSV6 310 aaKnown RBP21.37■■□□□ 1.01
PTCD3-204ENST00000418628 ORC3Q9UBD5 711 aaPredicted RBP21.37■■□□□ 1.01
PTCD3-204ENST00000418628 JAK2O60674 1132 aa21.36■■□□□ 1.01
PTCD3-204ENST00000418628 DTNBO60941 627 aa21.36■■□□□ 1.01
PTCD3-204ENST00000418628 SEPT14Q6ZU15 432 aa21.36■■□□□ 1.01
PTCD3-204ENST00000418628 RNF180Q86T96 592 aa21.36■■□□□ 1.01
PTCD3-204ENST00000418628 REXO1Q8N1G1 1221 aaKnown RBP21.36■■□□□ 1.01
PTCD3-204ENST00000418628 LLPHQ9BRT6 129 aaKnown RBP21.36■■□□□ 1.01
PTCD3-204ENST00000418628 PHF20Q9BVI0 1012 aa21.36■■□□□ 1.01
PTCD3-204ENST00000418628 C11orf49Q9H6J7 331 aa21.36■■□□□ 1.01
PTCD3-204ENST00000418628 TMEM260Q9NX78 707 aa21.36■■□□□ 1.01
PTCD3-204ENST00000418628 DDX41Q9UJV9 622 aaKnown RBP21.36■■□□□ 1.01
PTCD3-204ENST00000418628 KBTBD13C9JR72 458 aa21.35■■□□□ 1.01
PTCD3-204ENST00000418628 MLLT1Q03111 559 aaPredicted RBP21.35■■□□□ 1.01
PTCD3-204ENST00000418628 ARHGAP1Q07960 439 aa21.35■■□□□ 1.01
PTCD3-204ENST00000418628 SNX17Q15036 470 aa21.35■■□□□ 1.01
PTCD3-204ENST00000418628 MCTP2Q6DN12 878 aa21.35■■□□□ 1.01
PTCD3-204ENST00000418628 CCDC83Q8IWF9 413 aa21.35■■□□□ 1.01
PTCD3-204ENST00000418628 BICD2Q8TD16 824 aa21.35■■□□□ 1.01
PTCD3-204ENST00000418628 EMID1Q96A84 441 aaPredicted RBP21.35■■□□□ 1.01
PTCD3-204ENST00000418628 PGBD1Q96JS3 809 aa21.35■■□□□ 1.01
PTCD3-204ENST00000418628 PCDHA4Q9UN74 947 aa21.35■■□□□ 1.01
PTCD3-204ENST00000418628 UBIAD1Q9Y5Z9 338 aa21.35■■□□□ 1.01
PTCD3-204ENST00000418628 MOXD2PA6NHM9 499 aa21.34■■□□□ 1.01
PTCD3-204ENST00000418628 C6orf222P0C671 652 aaPredicted RBP21.34■■□□□ 1.01
PTCD3-204ENST00000418628 TXNP10599 105 aaKnown RBP21.34■■□□□ 1.01
PTCD3-204ENST00000418628 TGFB3P10600 412 aa21.34■■□□□ 1.01
PTCD3-204ENST00000418628 GALNT17Q6IS24 598 aa21.34■■□□□ 1.01
PTCD3-204ENST00000418628 KCNV1Q6PIU1 500 aa21.34■■□□□ 1.01
PTCD3-204ENST00000418628 COPS5Q92905 334 aa21.34■■□□□ 1.01
PTCD3-204ENST00000418628 EHMT1Q9H9B1 1298 aa21.34■■□□□ 1.01
PTCD3-204ENST00000418628 SPATA31C2B4DYI2 1134 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 CYP3A4P08684 503 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 ITGB5P18084 799 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 UBA1P22314 1058 aaKnown RBP21.33■■□□□ 1.01
PTCD3-204ENST00000418628 MCM2P49736 904 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 FSCN1Q16658 493 aaKnown RBP21.33■■□□□ 1.01
PTCD3-204ENST00000418628 JAKMIP3Q5VZ66 844 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 RASGRP4Q8TDF6 673 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 WASF1Q92558 559 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 GPRASP2Q96D09 838 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 TMX3Q96JJ7 454 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 ZFP91Q96JP5 570 aaPredicted RBP21.33■■□□□ 1.01
PTCD3-204ENST00000418628 SPC25Q9HBM1 224 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 MRVI1Q9Y6F6 885 aa21.33■■□□□ 1.01
PTCD3-204ENST00000418628 MYH15Q9Y2K3 1946 aa21.33■■□□□ 1
PTCD3-204ENST00000418628 A0A1W2PQ45 241 aaPredicted RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms