RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 ADAMTS19Q8TE59 1207 aa8.55□□□□□ -1.04
CASP4-202ENST00000417440 ATXN2LQ8WWM7 1075 aaKnown RBP8.55□□□□□ -1.04
CASP4-202ENST00000417440 NOC4LQ9BVI4 516 aaKnown RBP8.55□□□□□ -1.04
CASP4-202ENST00000417440 WNT8AQ9H1J5 351 aa8.55□□□□□ -1.04
CASP4-202ENST00000417440 CERS4Q9HA82 394 aa8.55□□□□□ -1.04
CASP4-202ENST00000417440 IL17RBQ9NRM6 502 aa8.55□□□□□ -1.04
CASP4-202ENST00000417440 TRMT13Q9NUP7 481 aaKnown RBP8.55□□□□□ -1.04
CASP4-202ENST00000417440 SLC4A7Q9Y6M7 1214 aa8.55□□□□□ -1.04
CASP4-202ENST00000417440 CUL9Q8IWT3 2517 aa8.55□□□□□ -1.04
CASP4-202ENST00000417440 PARP14Q460N5 1801 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 MYH8P13535 1937 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 PLXNA1Q9UIW2 1896 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 PTPDC1A2A3K4 754 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 GOLGA8CPA6NN73 597 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 RFXAPO00287 272 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 KDM4AO75164 1064 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 CALML3P27482 149 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 NKX3-2P78367 333 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 MRPS5P82675 430 aaKnown RBP8.54□□□□□ -1.04
CASP4-202ENST00000417440 ZMYM1Q5SVZ6 1142 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 AKNAD1Q5T1N1 836 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 PPP2R2DQ66LE6 453 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 RPUSD2Q8IZ73 545 aaKnown RBP8.54□□□□□ -1.04
CASP4-202ENST00000417440 SLC43A3Q8NBI5 491 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 OR6J1Q8NGC5 347 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 PI4K2BQ8TCG2 481 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 UHRF1Q96T88 793 aaPredicted RBP8.54□□□□□ -1.04
CASP4-202ENST00000417440 WDR11Q9BZH6 1224 aa8.54□□□□□ -1.04
CASP4-202ENST00000417440 ALDH8A1Q9H2A2 487 aaPredicted RBP8.54□□□□□ -1.04
CASP4-202ENST00000417440 PLIN4Q96Q06 1357 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 NFIBO00712 420 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 SPTLC1O15269 473 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 ICAM1P05362 532 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 ATP2A2P16615 1042 aaKnown RBP8.53□□□□□ -1.04
CASP4-202ENST00000417440 ALDH5A1P51649 535 aaPredicted RBP8.53□□□□□ -1.04
CASP4-202ENST00000417440 TTLL4Q14679 1199 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 TUSC1Q2TAM9 212 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 VPS53Q5VIR6 699 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 SYDE2Q5VT97 1194 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 SLC30A10Q6XR72 485 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 NECAB3Q96P71 396 aaPredicted RBP8.53□□□□□ -1.04
CASP4-202ENST00000417440 FTOQ9C0B1 505 aaKnown RBP eCLIP8.53□□□□□ -1.04
CASP4-202ENST00000417440 VTA1Q9NP79 307 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.53□□□□□ -1.04
CASP4-202ENST00000417440 TNKSO95271 1327 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 TTC41PQ6P2S7 1318 aa8.53□□□□□ -1.04
CASP4-202ENST00000417440 FOXP2O15409 715 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 PLA2G6O60733 806 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 CA3P07451 260 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 SUPT20HL2P0C7V6 817 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 MX1P20591 662 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 CPT1AP50416 773 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 TFF2Q03403 129 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 DUSP28Q4G0W2 176 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 TMEM67Q5HYA8 995 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 DCAF4Q8WV16 495 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 COPS5Q92905 334 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 WNT2BQ93097 391 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 TMEM47Q9BQJ4 181 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 MTG1Q9BT17 334 aaPredicted RBP8.52□□□□□ -1.05
CASP4-202ENST00000417440 RANBP17Q9H2T7 1088 aaKnown RBP8.52□□□□□ -1.05
CASP4-202ENST00000417440 POLR3EQ9NVU0 708 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 ADD3Q9UEY8 706 aaKnown RBP8.52□□□□□ -1.05
CASP4-202ENST00000417440 NOD1Q9Y239 953 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 Q9Y3F1 56 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 PCDHB15Q9Y5E8 787 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 PCDHA11Q9Y5I1 949 aa8.52□□□□□ -1.05
CASP4-202ENST00000417440 GREB1LQ9C091 1923 aaPredicted RBP8.51□□□□□ -1.05
CASP4-202ENST00000417440 CHD9Q3L8U1 2897 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 RBAK-RBAKDNI3L0D1 243 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 CLK2P49760 499 aaKnown RBP8.51□□□□□ -1.05
CASP4-202ENST00000417440 HAND2P61296 217 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 PURAQ00577 322 aaKnown RBP8.51□□□□□ -1.05
CASP4-202ENST00000417440 PPP2R5BQ15173 497 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 NBPF20Q3BBV1 942 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 USH1GQ495M9 461 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 BRDTQ58F21 947 aaPredicted RBP8.51□□□□□ -1.05
CASP4-202ENST00000417440 ANKRD45Q5TZF3 282 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 KRT40Q6A162 431 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 RNF207Q6ZRF8 634 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 RETREG2Q8NC44 543 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 ARNTL2Q8WYA1 636 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 SEZ6LQ9BYH1 1024 aa8.51□□□□□ -1.05
CASP4-202ENST00000417440 CFHP08603 1231 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 GOLGA8HP0CJ92 632 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 TXNP10599 105 aaKnown RBP8.5□□□□□ -1.05
CASP4-202ENST00000417440 TOP1P11387 765 aaKnown RBP8.5□□□□□ -1.05
CASP4-202ENST00000417440 ACTN1P12814 892 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 KCNQ1P51787 676 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 RPS6P62753 249 aaKnown RBP8.5□□□□□ -1.05
CASP4-202ENST00000417440 CHST3Q7LGC8 479 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 MORC4Q8TE76 937 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 CLEC4DQ8WXI8 215 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 VWCEQ96DN2 955 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 FAM227BQ96M60 508 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 ZKSCAN3Q9BRR0 538 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 UBA5Q9GZZ9 404 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 CPVLQ9H3G5 476 aa8.5□□□□□ -1.05
CASP4-202ENST00000417440 TSR3Q9UJK0 312 aaKnown RBP8.5□□□□□ -1.05
CASP4-202ENST00000417440 RAD50Q92878 1312 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms