RNA–Protein interactions for RNA: ENST00000416585.1

SNX30-202, Transcript of sorting nexin family member 30, humanhuman

TSL 3

Gene SNX30, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-202ENST00000416585 ZSWIM5Q9P217 1185 aa13.22□□□□□ -0.29
SNX30-202ENST00000416585 MRVI1Q9Y6F6 885 aa13.22□□□□□ -0.29
SNX30-202ENST00000416585 TNFRSF10AO00220 468 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 BAIAP3O94812 1187 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 ARIH2O95376 493 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 IQCF3P0C7M6 154 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 MRPS5P82675 430 aaKnown RBP13.21□□□□□ -0.29
SNX30-202ENST00000416585 LY6KQ17RY6 165 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 DHX37Q8IY37 1157 aaKnown RBP13.21□□□□□ -0.29
SNX30-202ENST00000416585 C7orf31Q8N865 590 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 PHOSPHO2Q8TCD6 241 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 AFAP1L1Q8TED9 768 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 PPP1R13LQ8WUF5 828 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 RUFY2Q8WXA3 655 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 ANKS1AQ92625 1134 aa13.21□□□□□ -0.29
SNX30-202ENST00000416585 EIF3JO75822 258 aaKnown RBP13.2□□□□□ -0.3
SNX30-202ENST00000416585 PARNO95453 639 aaKnown RBP13.2□□□□□ -0.3
SNX30-202ENST00000416585 IGHDP01880 384 aa13.2□□□□□ -0.3
SNX30-202ENST00000416585 CA3P07451 260 aa13.2□□□□□ -0.3
SNX30-202ENST00000416585 MYCLP12524 364 aaPredicted RBP13.2□□□□□ -0.3
SNX30-202ENST00000416585 MYOGP15173 224 aa13.2□□□□□ -0.3
SNX30-202ENST00000416585 SART3Q15020 963 aaKnown RBP13.2□□□□□ -0.3
SNX30-202ENST00000416585 AAK1Q2M2I8 961 aa13.2□□□□□ -0.3
SNX30-202ENST00000416585 KCNV1Q6PIU1 500 aa13.2□□□□□ -0.3
SNX30-202ENST00000416585 RALYLQ86SE5 291 aaKnown RBP13.2□□□□□ -0.3
SNX30-202ENST00000416585 ALG1Q9BT22 464 aa13.2□□□□□ -0.3
SNX30-202ENST00000416585 ZBED2Q9BTP6 218 aa13.2□□□□□ -0.3
SNX30-202ENST00000416585 JMJD4Q9H9V9 463 aa13.2□□□□□ -0.3
SNX30-202ENST00000416585 PRDM6Q9NQX0 595 aa13.2□□□□□ -0.3
SNX30-202ENST00000416585 PXMP2Q9NR77 195 aa13.2□□□□□ -0.3
SNX30-202ENST00000416585 MAP3K20Q9NYL2 800 aaKnown RBP13.2□□□□□ -0.3
SNX30-202ENST00000416585 EYSQ5T1H1 3165 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 NR3C2P08235 984 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 ARHGAP1Q07960 439 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 LAMC2Q13753 1193 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 ADGRE1Q14246 886 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 CCDC62Q6P9F0 684 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 LRRC8DQ7L1W4 858 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 SESTD1Q86VW0 696 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 HOMER1Q86YM7 354 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 SAMD3Q8N6K7 520 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 EXOC6Q8TAG9 804 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 TBC1D5Q92609 795 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 ASB2Q96Q27 587 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 COL20A1Q9P218 1284 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 CDH23Q9H251 3354 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 RALGAPA2Q2PPJ7 1873 aa13.19□□□□□ -0.3
SNX30-202ENST00000416585 ZBTB5O15062 677 aa13.18□□□□□ -0.3
SNX30-202ENST00000416585 TLL1O43897 1013 aa13.18□□□□□ -0.3
SNX30-202ENST00000416585 SELPP16109 830 aa13.18□□□□□ -0.3
SNX30-202ENST00000416585 PSEN2P49810 448 aa13.18□□□□□ -0.3
SNX30-202ENST00000416585 MFSD10Q14728 455 aa13.18□□□□□ -0.3
SNX30-202ENST00000416585 GDF6Q6KF10 455 aaPredicted RBP13.18□□□□□ -0.3
SNX30-202ENST00000416585 HERC6Q8IVU3 1022 aa13.18□□□□□ -0.3
SNX30-202ENST00000416585 ADAMTS19Q8TE59 1207 aa13.18□□□□□ -0.3
SNX30-202ENST00000416585 CERS4Q9HA82 394 aa13.18□□□□□ -0.3
SNX30-202ENST00000416585 PCDHA1Q9Y5I3 950 aa13.18□□□□□ -0.3
SNX30-202ENST00000416585 U3KPZ7 1027 aaPredicted RBP13.18□□□□□ -0.3
SNX30-202ENST00000416585 PRRC2BQ5JSZ5 2229 aaKnown RBP13.17□□□□□ -0.3
SNX30-202ENST00000416585 LOXHD1Q8IVV2 1947 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 IFIT3O14879 490 aaKnown RBP13.17□□□□□ -0.3
SNX30-202ENST00000416585 ZNF286BP0CG31 522 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 CCND2P30279 289 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 HSD17B4P51659 736 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 WTAPQ15007 396 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 KIAA0753Q2KHM9 967 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 CNKSR3Q6P9H4 555 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 STAG2Q8N3U4 1231 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 PPTC7Q8NI37 304 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 ARNTL2Q8WYA1 636 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 EMID1Q96A84 441 aaPredicted RBP13.17□□□□□ -0.3
SNX30-202ENST00000416585 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 HDAC6Q9UBN7 1215 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 GTF2IRD1Q9UHL9 959 aa13.17□□□□□ -0.3
SNX30-202ENST00000416585 DDX41Q9UJV9 622 aaKnown RBP13.17□□□□□ -0.3
SNX30-202ENST00000416585 GCOM1H8Y6P7 765 aaPredicted RBP13.16□□□□□ -0.3
SNX30-202ENST00000416585 EFCAB14O75071 495 aa13.16□□□□□ -0.3
SNX30-202ENST00000416585 POLR2MP0CAP2 368 aa13.16□□□□□ -0.3
SNX30-202ENST00000416585 PTK7Q13308 1070 aa13.16□□□□□ -0.3
SNX30-202ENST00000416585 PGM5Q15124 567 aa13.16□□□□□ -0.3
SNX30-202ENST00000416585 GNPTABQ3T906 1256 aa13.16□□□□□ -0.3
SNX30-202ENST00000416585 TTC22Q5TAA0 569 aa13.16□□□□□ -0.3
SNX30-202ENST00000416585 FCHSD1Q86WN1 690 aa13.16□□□□□ -0.3
SNX30-202ENST00000416585 NCOA7Q8NI08 942 aa13.16□□□□□ -0.3
SNX30-202ENST00000416585 SPATA33Q96N06 139 aa13.16□□□□□ -0.3
SNX30-202ENST00000416585 UHRF1Q96T88 793 aaPredicted RBP13.16□□□□□ -0.3
SNX30-202ENST00000416585 PDCD2LQ9BRP1 358 aa13.16□□□□□ -0.3
SNX30-202ENST00000416585 NOP56O00567 594 aaKnown RBP13.15□□□□□ -0.3
SNX30-202ENST00000416585 SORBS3O60504 671 aa13.15□□□□□ -0.3
SNX30-202ENST00000416585 GGPS1O95749 300 aa13.15□□□□□ -0.3
SNX30-202ENST00000416585 F2P00734 622 aa13.15□□□□□ -0.3
SNX30-202ENST00000416585 CKBP12277 381 aa13.15□□□□□ -0.3
SNX30-202ENST00000416585 HOXA13P31271 388 aaPredicted RBP13.15□□□□□ -0.3
SNX30-202ENST00000416585 WDR5P61964 334 aaKnown RBP13.15□□□□□ -0.3
SNX30-202ENST00000416585 IKBKEQ14164 716 aa13.15□□□□□ -0.3
SNX30-202ENST00000416585 GRM4Q14833 912 aa13.15□□□□□ -0.3
SNX30-202ENST00000416585 SEC23AQ15436 765 aa13.15□□□□□ -0.3
SNX30-202ENST00000416585 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
SNX30-202ENST00000416585 CATIPQ7Z7H3 387 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms