RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 FCHSD1Q86WN1 690 aa28.9■■■□□ 2.22
HLA-C-204ENST00000415537 CCDC136Q96JN2 1154 aa28.9■■■□□ 2.22
HLA-C-204ENST00000415537 NOC4LQ9BVI4 516 aaKnown RBP28.9■■■□□ 2.22
HLA-C-204ENST00000415537 SPZ1Q9BXG8 430 aa28.9■■■□□ 2.22
HLA-C-204ENST00000415537 IL23AQ9NPF7 189 aa28.9■■■□□ 2.22
HLA-C-204ENST00000415537 TRMT13Q9NUP7 481 aaKnown RBP28.9■■■□□ 2.22
HLA-C-204ENST00000415537 SEC63Q9UGP8 760 aaKnown RBP28.9■■■□□ 2.22
HLA-C-204ENST00000415537 DDX41Q9UJV9 622 aaKnown RBP28.9■■■□□ 2.22
HLA-C-204ENST00000415537 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.89■■■□□ 2.22
HLA-C-204ENST00000415537 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.89■■■□□ 2.22
HLA-C-204ENST00000415537 MMP3P08254 477 aa28.89■■■□□ 2.22
HLA-C-204ENST00000415537 SMARCA1P28370 1054 aa28.89■■■□□ 2.22
HLA-C-204ENST00000415537 LIFRP42702 1097 aa28.89■■■□□ 2.22
HLA-C-204ENST00000415537 CCL23P55773 120 aa28.89■■■□□ 2.22
HLA-C-204ENST00000415537 CHMP4BP1P59074 171 aa28.89■■■□□ 2.22
HLA-C-204ENST00000415537 ARHGAP1Q07960 439 aa28.89■■■□□ 2.22
HLA-C-204ENST00000415537 PGM5Q15124 567 aa28.89■■■□□ 2.22
HLA-C-204ENST00000415537 C16orf59Q7L2K0 433 aa28.89■■■□□ 2.22
HLA-C-204ENST00000415537 UMODL1Q5DID0 1318 aa28.89■■■□□ 2.21
HLA-C-204ENST00000415537 CDC45O75419 566 aa28.88■■■□□ 2.21
HLA-C-204ENST00000415537 CASTP20810 708 aaKnown RBP28.88■■■□□ 2.21
HLA-C-204ENST00000415537 CCND2P30279 289 aa28.88■■■□□ 2.21
HLA-C-204ENST00000415537 KCNV1Q6PIU1 500 aa28.88■■■□□ 2.21
HLA-C-204ENST00000415537 ZNF365Q70YC5 407 aa28.88■■■□□ 2.21
HLA-C-204ENST00000415537 SLC12A7Q9Y666 1083 aa28.88■■■□□ 2.21
HLA-C-204ENST00000415537 PTPN11Q06124 597 aaPredicted RBP28.87■■■□□ 2.21
HLA-C-204ENST00000415537 DGKDQ16760 1214 aa28.87■■■□□ 2.21
HLA-C-204ENST00000415537 VSIG10LQ86VR7 867 aa28.87■■■□□ 2.21
HLA-C-204ENST00000415537 DHX37Q8IY37 1157 aaKnown RBP28.87■■■□□ 2.21
HLA-C-204ENST00000415537 CYP2C9P11712 490 aa28.86■■■□□ 2.21
HLA-C-204ENST00000415537 LAMC2Q13753 1193 aa28.86■■■□□ 2.21
HLA-C-204ENST00000415537 RPUSD2Q8IZ73 545 aaKnown RBP28.86■■■□□ 2.21
HLA-C-204ENST00000415537 LRRC2Q9BYS8 371 aa28.86■■■□□ 2.21
HLA-C-204ENST00000415537 MTIF3Q9H2K0 278 aaKnown RBP28.86■■■□□ 2.21
HLA-C-204ENST00000415537 SEMA6BQ9H3T3 888 aa28.86■■■□□ 2.21
HLA-C-204ENST00000415537 FGBP02675 491 aa28.85■■■□□ 2.21
HLA-C-204ENST00000415537 RXRAP19793 462 aa28.85■■■□□ 2.21
HLA-C-204ENST00000415537 SYNE3Q6ZMZ3 975 aa28.85■■■□□ 2.21
HLA-C-204ENST00000415537 PPP1R13LQ8WUF5 828 aa28.85■■■□□ 2.21
HLA-C-204ENST00000415537 CUL5Q93034 780 aa28.85■■■□□ 2.21
HLA-C-204ENST00000415537 EMID1Q96A84 441 aaPredicted RBP28.85■■■□□ 2.21
HLA-C-204ENST00000415537 GUCD1Q96NT3 240 aa28.85■■■□□ 2.21
HLA-C-204ENST00000415537 NEK1Q96PY6 1258 aa28.85■■■□□ 2.21
HLA-C-204ENST00000415537 NOD1Q9Y239 953 aa28.85■■■□□ 2.21
HLA-C-204ENST00000415537 PLEKHA8P1O95397 391 aa28.84■■■□□ 2.21
HLA-C-204ENST00000415537 COL9A3Q14050 684 aaPredicted RBP28.84■■■□□ 2.21
HLA-C-204ENST00000415537 SRBD1Q8N5C6 995 aaKnown RBP28.84■■■□□ 2.21
HLA-C-204ENST00000415537 SLC17A8Q8NDX2 589 aa28.84■■■□□ 2.21
HLA-C-204ENST00000415537 IL31RAQ8NI17 732 aa28.84■■■□□ 2.21
HLA-C-204ENST00000415537 SMARCC2Q8TAQ2 1214 aa28.84■■■□□ 2.21
HLA-C-204ENST00000415537 WNT8AQ9H1J5 351 aa28.84■■■□□ 2.21
HLA-C-204ENST00000415537 RGS20O76081 388 aa28.83■■■□□ 2.21
HLA-C-204ENST00000415537 CMTR1Q8N1G2 835 aaKnown RBP28.83■■■□□ 2.21
HLA-C-204ENST00000415537 PPTC7Q8NI37 304 aa28.83■■■□□ 2.21
HLA-C-204ENST00000415537 SCLYQ96I15 445 aa28.83■■■□□ 2.21
HLA-C-204ENST00000415537 COL6A3P12111 3177 aa28.83■■■□□ 2.2
HLA-C-204ENST00000415537 TMEM265A0A087WTH1 108 aa28.82■■■□□ 2.2
HLA-C-204ENST00000415537 TGFB3P10600 412 aa28.82■■■□□ 2.2
HLA-C-204ENST00000415537 RAB11FIP4Q86YS3 637 aa28.82■■■□□ 2.2
HLA-C-204ENST00000415537 FANCBQ8NB91 859 aa28.82■■■□□ 2.2
HLA-C-204ENST00000415537 HERVK_113Q902F9 699 aa28.82■■■□□ 2.2
HLA-C-204ENST00000415537 KATNAL1Q9BW62 490 aa28.82■■■□□ 2.2
HLA-C-204ENST00000415537 DNAJB2P25686 324 aa28.81■■■□□ 2.2
HLA-C-204ENST00000415537 GNPTABQ3T906 1256 aa28.81■■■□□ 2.2
HLA-C-204ENST00000415537 RASIP1Q5U651 963 aa28.81■■■□□ 2.2
HLA-C-204ENST00000415537 SGMS1Q86VZ5 419 aa28.81■■■□□ 2.2
HLA-C-204ENST00000415537 MICU3Q86XE3 530 aa28.81■■■□□ 2.2
HLA-C-204ENST00000415537 RETREG2Q8NC44 543 aa28.81■■■□□ 2.2
HLA-C-204ENST00000415537 ZFP91Q96JP5 570 aaPredicted RBP28.81■■■□□ 2.2
HLA-C-204ENST00000415537 TTYH1Q9H313 450 aaPredicted RBP28.81■■■□□ 2.2
HLA-C-204ENST00000415537 SORBS3O60504 671 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 STAM2O75886 525 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 GGPS1O95749 300 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 KRT32Q14532 448 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 PTGISQ16647 500 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 CELF3Q5SZQ8 465 aaKnown RBP28.8■■■□□ 2.2
HLA-C-204ENST00000415537 MYSM1Q5VVJ2 828 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 OTOP2Q7RTS6 562 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 CCDC82Q8N4S0 544 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 KAT2BQ92831 832 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 SPATA33Q96N06 139 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 CDX2Q99626 313 aaPredicted RBP28.8■■■□□ 2.2
HLA-C-204ENST00000415537 MLXIPQ9HAP2 919 aa28.8■■■□□ 2.2
HLA-C-204ENST00000415537 BFSP2Q13515 415 aa28.79■■■□□ 2.2
HLA-C-204ENST00000415537 TSGA10IPQ3SY00 556 aa28.79■■■□□ 2.2
HLA-C-204ENST00000415537 USP17L6PQ6QN14 398 aa28.79■■■□□ 2.2
HLA-C-204ENST00000415537 DHX32Q7L7V1 743 aaKnown RBP28.79■■■□□ 2.2
HLA-C-204ENST00000415537 FRMPD4Q14CM0 1322 aa28.78■■■□□ 2.2
HLA-C-204ENST00000415537 PITPNM1O00562 1244 aa28.78■■■□□ 2.2
HLA-C-204ENST00000415537 PFKMP08237 780 aa28.78■■■□□ 2.2
HLA-C-204ENST00000415537 SESTD1Q86VW0 696 aa28.78■■■□□ 2.2
HLA-C-204ENST00000415537 CCDC155Q8N6L0 562 aa28.78■■■□□ 2.2
HLA-C-204ENST00000415537 C7orf31Q8N865 590 aa28.78■■■□□ 2.2
HLA-C-204ENST00000415537 TIFAQ96CG3 184 aa28.78■■■□□ 2.2
HLA-C-204ENST00000415537 ALG1Q9BT22 464 aa28.78■■■□□ 2.2
HLA-C-204ENST00000415537 TRIP12Q14669 1992 aaPredicted RBP28.78■■■□□ 2.2
HLA-C-204ENST00000415537 SCN5AQ14524 2016 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 GRXCR1A8MXD5 290 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 PIK3CDO00329 1044 aa28.77■■■□□ 2.2
HLA-C-204ENST00000415537 PPFIA4O75335 1185 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms