RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 HERVK_113Q902F9 699 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 ZFP91Q96JP5 570 aaPredicted RBP18.04■□□□□ 0.48
ACTB-202ENST00000414620 ZNF576Q9H609 170 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 RIOX1Q9H6W3 641 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 MRVI1Q9Y6F6 885 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 MYO9BQ13459 2157 aa18.04■□□□□ 0.48
ACTB-202ENST00000414620 SUPT20HL2P0C7V6 817 aa18.03■□□□□ 0.48
ACTB-202ENST00000414620 TROAPQ12815 778 aa18.03■□□□□ 0.48
ACTB-202ENST00000414620 NFRKBQ6P4R8 1299 aa18.03■□□□□ 0.48
ACTB-202ENST00000414620 CATIPQ7Z7H3 387 aa18.03■□□□□ 0.48
ACTB-202ENST00000414620 FCHSD1Q86WN1 690 aa18.03■□□□□ 0.48
ACTB-202ENST00000414620 IL31RAQ8NI17 732 aa18.03■□□□□ 0.48
ACTB-202ENST00000414620 PDCD2LQ9BRP1 358 aa18.03■□□□□ 0.48
ACTB-202ENST00000414620 MTIF3Q9H2K0 278 aaKnown RBP18.03■□□□□ 0.48
ACTB-202ENST00000414620 DDX41Q9UJV9 622 aaKnown RBP18.03■□□□□ 0.48
ACTB-202ENST00000414620 ZBBXA8MT70 800 aa18.02■□□□□ 0.48
ACTB-202ENST00000414620 EIF3JO75822 258 aaKnown RBP18.02■□□□□ 0.48
ACTB-202ENST00000414620 GHRHRQ02643 423 aa18.02■□□□□ 0.48
ACTB-202ENST00000414620 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.02■□□□□ 0.487e-13■■■■□ 19.9
ACTB-202ENST00000414620 ZNF654Q8IZM8 581 aa18.02■□□□□ 0.48
ACTB-202ENST00000414620 IGDCC4Q8TDY8 1250 aa18.02■□□□□ 0.48
ACTB-202ENST00000414620 LSG1Q9H089 658 aaKnown RBP18.02■□□□□ 0.48
ACTB-202ENST00000414620 NOD1Q9Y239 953 aa18.02■□□□□ 0.48
ACTB-202ENST00000414620 GCOM1H8Y6P7 765 aaPredicted RBP18.01■□□□□ 0.47
ACTB-202ENST00000414620 POLR2MP0CAP2 368 aa18.01■□□□□ 0.47
ACTB-202ENST00000414620 ZNF286BP0CG31 522 aa18.01■□□□□ 0.47
ACTB-202ENST00000414620 COL9A3Q14050 684 aaPredicted RBP18.01■□□□□ 0.47
ACTB-202ENST00000414620 PGM5Q15124 567 aa18.01■□□□□ 0.47
ACTB-202ENST00000414620 CASC1Q6TDU7 716 aa18.01■□□□□ 0.47
ACTB-202ENST00000414620 RAB11FIP4Q86YS3 637 aa18.01■□□□□ 0.47
ACTB-202ENST00000414620 RPUSD2Q8IZ73 545 aaKnown RBP18.01■□□□□ 0.47
ACTB-202ENST00000414620 VWCEQ96DN2 955 aa18.01■□□□□ 0.47
ACTB-202ENST00000414620 ESYT1Q9BSJ8 1104 aa18.01■□□□□ 0.47
ACTB-202ENST00000414620 NKX2-4Q9H2Z4 354 aa18.01■□□□□ 0.47
ACTB-202ENST00000414620 LY9Q9HBG7 655 aa18.01■□□□□ 0.47
ACTB-202ENST00000414620 PNMA6FA0A0J9YX94 578 aa18■□□□□ 0.47
ACTB-202ENST00000414620 PRC1O43663 620 aa18■□□□□ 0.47
ACTB-202ENST00000414620 RXRAP19793 462 aa18■□□□□ 0.47
ACTB-202ENST00000414620 CASTP20810 708 aaKnown RBP18■□□□□ 0.47
ACTB-202ENST00000414620 RABGGTBP53611 331 aa18■□□□□ 0.47
ACTB-202ENST00000414620 PTPN11Q06124 597 aaPredicted RBP18■□□□□ 0.47
ACTB-202ENST00000414620 PTGISQ16647 500 aa18■□□□□ 0.47
ACTB-202ENST00000414620 GDF6Q6KF10 455 aaPredicted RBP18■□□□□ 0.47
ACTB-202ENST00000414620 DHX37Q8IY37 1157 aaKnown RBP18■□□□□ 0.47
ACTB-202ENST00000414620 CTCFLQ8NI51 663 aaPredicted RBP18■□□□□ 0.47
ACTB-202ENST00000414620 KAT2BQ92831 832 aa18■□□□□ 0.47
ACTB-202ENST00000414620 GPKOWQ92917 476 aaPredicted RBP eCLIP18■□□□□ 0.47
ACTB-202ENST00000414620 ALG1Q9BT22 464 aa18■□□□□ 0.47
ACTB-202ENST00000414620 MSRAQ9UJ68 235 aa18■□□□□ 0.47
ACTB-202ENST00000414620 YBX2Q9Y2T7 364 aaKnown RBP18■□□□□ 0.47
ACTB-202ENST00000414620 SLC27A2O14975 620 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 RGS20O76081 388 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 CCND2P30279 289 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 RAB30Q15771 203 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 DGKDQ16760 1214 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 NFXL1Q6ZNB6 911 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 RETREG2Q8NC44 543 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 LRRC2Q9BYS8 371 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 ANO2Q9NQ90 1003 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 MAP3K20Q9NYL2 800 aaKnown RBP17.99■□□□□ 0.47
ACTB-202ENST00000414620 SLC4A7Q9Y6M7 1214 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 CDH23Q9H251 3354 aa17.99■□□□□ 0.47
ACTB-202ENST00000414620 RBAK-RBAKDNI3L0D1 243 aa17.98■□□□□ 0.47
ACTB-202ENST00000414620 SH2B2O14492 632 aaPredicted RBP17.98■□□□□ 0.47
ACTB-202ENST00000414620 DDAH1O94760 285 aa17.98■□□□□ 0.47
ACTB-202ENST00000414620 PLEKHA8P1O95397 391 aa17.98■□□□□ 0.47
ACTB-202ENST00000414620 GGPS1O95749 300 aa17.98■□□□□ 0.47
ACTB-202ENST00000414620 IQCF3P0C7M6 154 aa17.98■□□□□ 0.47
ACTB-202ENST00000414620 PSEN2P49810 448 aa17.98■□□□□ 0.47
ACTB-202ENST00000414620 TRAF1Q13077 416 aa17.98■□□□□ 0.47
ACTB-202ENST00000414620 LAMC2Q13753 1193 aa17.98■□□□□ 0.47
ACTB-202ENST00000414620 CREB3L3Q68CJ9 461 aa17.98■□□□□ 0.47
ACTB-202ENST00000414620 PRDM12Q9H4Q4 367 aa17.98■□□□□ 0.47
ACTB-202ENST00000414620 CCDC69A6NI79 296 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 PFKMP08237 780 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 MYOGP15173 224 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 UBA1P22314 1058 aaKnown RBP17.97■□□□□ 0.47
ACTB-202ENST00000414620 MCM5P33992 734 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 BFSP2Q13515 415 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 MFSD10Q14728 455 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 VSIG10LQ86VR7 867 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 CMTR1Q8N1G2 835 aaKnown RBP17.97■□□□□ 0.47
ACTB-202ENST00000414620 SAMD3Q8N6K7 520 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 PPTC7Q8NI37 304 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 EMID1Q96A84 441 aaPredicted RBP17.97■□□□□ 0.47
ACTB-202ENST00000414620 CTAGE1Q96RT6 745 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 FTOQ9C0B1 505 aaKnown RBP eCLIP17.97■□□□□ 0.471e-22■■□□□ 11.6
ACTB-202ENST00000414620 HDAC6Q9UBN7 1215 aa17.97■□□□□ 0.47
ACTB-202ENST00000414620 KAT6AQ92794 2004 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 PITPNM1O00562 1244 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 KIF5BP33176 963 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 SP2Q02086 613 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 KIAA0753Q2KHM9 967 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 HSDL1Q3SXM5 330 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 CELF3Q5SZQ8 465 aaKnown RBP17.96■□□□□ 0.47
ACTB-202ENST00000414620 SESTD1Q86VW0 696 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 C7orf31Q8N865 590 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 USP38Q8NB14 1042 aa17.96■□□□□ 0.47
ACTB-202ENST00000414620 DHX38Q92620 1227 aaKnown RBP17.96■□□□□ 0.47
ACTB-202ENST00000414620 RRP36Q96EU6 259 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms