RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 FGFR1OPO95684 399 aaKnown RBP16.62■□□□□ 0.25
TTC39A-208ENST00000413473 MYBL2P10244 700 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 ATP2B4P23634 1241 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 IRX5P78411 483 aaPredicted RBP16.62■□□□□ 0.25
TTC39A-208ENST00000413473 CCNI2Q6ZMN8 369 aaPredicted RBP16.62■□□□□ 0.25
TTC39A-208ENST00000413473 GSPT2Q8IYD1 628 aaKnown RBP16.62■□□□□ 0.25
TTC39A-208ENST00000413473 SH2D4AQ9H788 454 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 SNX12Q9UMY4 172 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 LRRC53A6NM62 1247 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 MOCS3O95396 460 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 SYF2O95926 243 aaKnown RBP16.62■□□□□ 0.25
TTC39A-208ENST00000413473 TNNI2P48788 182 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 LRRC63Q05C16 580 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 PRR5LQ6MZQ0 368 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 CREG2Q8IUH2 290 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 CLEC10AQ8IUN9 316 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
TTC39A-208ENST00000413473 COG1Q8WTW3 980 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 C8orf37Q96NL8 207 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 HPCAL4Q9UM19 191 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 AARSP49588 968 aaKnown RBP eCLIP16.61■□□□□ 0.25
TTC39A-208ENST00000413473 PICALMQ13492 652 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 LEKR1Q6ZMV7 388 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 LRRC55Q6ZSA7 311 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 FNBP4Q8N3X1 1017 aaPredicted RBP16.61■□□□□ 0.25
TTC39A-208ENST00000413473 FAM204AQ9H8W3 233 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 RNF40O75150 1001 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 ECM1Q16610 540 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 FAM196AQ6ZSG2 479 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 SLF2Q8IX21 1173 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 CCDC155Q8N6L0 562 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 GJA10Q969M2 543 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 LCA5LO95447 670 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 AKR1B1P15121 316 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 VPS72Q15906 364 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 UBE2SQ16763 222 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 ASPRV1Q53RT3 343 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 IQCEQ6IPM2 695 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 BAP1Q92560 729 aa16.61■□□□□ 0.25
TTC39A-208ENST00000413473 CWC15Q9P013 229 aaKnown RBP16.61■□□□□ 0.25
TTC39A-208ENST00000413473 GAKO14976 1311 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 ABCB11O95342 1321 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 MAGEA1P43355 309 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 EHHADHQ08426 723 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 ANKRD13CQ8N6S4 541 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 RIN2Q8WYP3 895 aaPredicted RBP16.6■□□□□ 0.25
TTC39A-208ENST00000413473 TANGO6Q9C0B7 1094 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 POLLQ9UGP5 575 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 ZC3H4Q9UPT8 1303 aaKnown RBP16.6■□□□□ 0.25
TTC39A-208ENST00000413473 TMEM119Q4V9L6 283 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 DPP8Q6V1X1 898 aaPredicted RBP16.6■□□□□ 0.25
TTC39A-208ENST00000413473 TSG101Q99816 390 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 JMJD4Q9H9V9 463 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 RIC8AQ9NPQ8 531 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 BTAF1O14981 1849 aa16.6■□□□□ 0.25
TTC39A-208ENST00000413473 PSMD2Q13200 908 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 EZH2Q15910 746 aaKnown RBP16.59■□□□□ 0.25
TTC39A-208ENST00000413473 CACNA2D4Q7Z3S7 1137 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 MYOCDQ8IZQ8 938 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 PSMB7Q99436 277 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 SELENOOQ9BVL4 669 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 LRRC27Q9C0I9 530 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 SALL4Q9UJQ4 1053 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 DAGLAQ9Y4D2 1042 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 SNHG28P0DPA3 235 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 CXCR5P32302 372 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 KCNMA1Q12791 1236 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 NFRKBQ6P4R8 1299 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 ADGRF4Q8IZF3 695 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 MMGT1Q8N4V1 131 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 TBC1D22AQ8WUA7 517 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 HDAC7Q8WUI4 952 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 HAS1Q92839 578 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 DNAJC19Q96DA6 116 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 OSBPL9Q96SU4 736 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 LRRC1Q9BTT6 524 aa16.59■□□□□ 0.25
TTC39A-208ENST00000413473 PNMA6FA0A0J9YX94 578 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 MARCH6O60337 910 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 PPP1R11O60927 126 aaPredicted RBP16.58■□□□□ 0.25
TTC39A-208ENST00000413473 PRPF6O94906 941 aaKnown RBP16.58■□□□□ 0.25
TTC39A-208ENST00000413473 PRLRP16471 622 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 MATR3P43243 847 aaKnown RBP eCLIP16.58■□□□□ 0.25
TTC39A-208ENST00000413473 MRPS25P82663 173 aaKnown RBP16.58■□□□□ 0.25
TTC39A-208ENST00000413473 GFPT1Q06210 699 aaPredicted RBP16.58■□□□□ 0.25
TTC39A-208ENST00000413473 GABPAQ06546 454 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 PPP4R3AQ6IN85 833 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 TTBK2Q6IQ55 1244 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 CCDC70Q6NSX1 233 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 PDXDC1Q6P996 788 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 SPATA4Q8NEY3 305 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 TBC1D16Q8TBP0 767 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 UIMC1Q96RL1 719 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 CRACR2AQ9BSW2 395 aa16.58■□□□□ 0.25
TTC39A-208ENST00000413473 DDX25Q9UHL0 483 aaKnown RBP16.58■□□□□ 0.25
TTC39A-208ENST00000413473 DMGDHQ9UI17 866 aaKnown RBP16.58■□□□□ 0.25
TTC39A-208ENST00000413473 A0A0U1RQG5 324 aaPredicted RBP16.58■□□□□ 0.24
TTC39A-208ENST00000413473 C6orf229H3BNL8 230 aa16.58■□□□□ 0.24
TTC39A-208ENST00000413473 TRAF5O00463 557 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms