RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 LDHAP00338 332 aaKnown RBP5.85□□□□□ -1.47
BRCA1-204ENST00000412061 LCP1P13796 627 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 POU3F2P20265 443 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-204ENST00000412061 GUCY2FP51841 1108 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 BNIP3Q12983 259 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 DUSP4Q13115 394 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 SAFB2Q14151 953 aaKnown RBP eCLIP5.85□□□□□ -1.472e-6■□□□□ 10.5
BRCA1-204ENST00000412061 INF2Q27J81 1249 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 KIZQ2M2Z5 673 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 SYCP2LQ5T4T6 812 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 SPTY2D1Q68D10 685 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-204ENST00000412061 UBE2R2Q712K3 238 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-204ENST00000412061 C14orf80Q86SX3 495 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 RNF180Q86T96 592 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 ATL2Q8NHH9 583 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 BCL7CQ8WUZ0 217 aaPredicted RBP5.85□□□□□ -1.47
BRCA1-204ENST00000412061 ALG1Q9BT22 464 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 TERF2IPQ9NYB0 399 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 TNFRSF10DQ9UBN6 386 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 PCDHA8Q9Y5H6 950 aa5.85□□□□□ -1.47
BRCA1-204ENST00000412061 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 SHTN1A0MZ66 631 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 ARVCFO00192 962 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 NPHS1O60500 1241 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 MSCO60682 206 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 NPTXRO95502 500 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 PRNPP04156 253 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 JMJD7P0C870 316 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 ATF3P18847 181 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 CD96P40200 585 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 NEK4P51957 841 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 GTF2A2P52657 109 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.47
BRCA1-204ENST00000412061 ZP2Q05996 745 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 ZNF460Q14592 562 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 MBLAC2Q68D91 279 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 WWC2Q6AWC2 1192 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 C11orf96Q7Z7L8 435 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 TMEM52Q8NDY8 209 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 MAP6Q96JE9 813 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 ARNT2Q9HBZ2 717 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 PCDHA2Q9Y5H9 948 aa5.84□□□□□ -1.47
BRCA1-204ENST00000412061 TIMM13Q9Y5L4 95 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-204ENST00000412061 C7orf72A4D263 438 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 BTBD11A6QL63 1104 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 FADS2P1A8MWK0 482 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 KATNA1O75449 491 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 SCGB1D2O95969 90 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 CD8BP10966 210 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 KIR2DL1P43626 348 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-204ENST00000412061 KIR2DL2P43627 348 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-204ENST00000412061 RAB27AP51159 221 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 MCL1Q07820 350 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 PAK1Q13153 545 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 LSAMPQ13449 338 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 BRD3Q15059 726 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 CFAP100Q494V2 611 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 ZCCHC8Q6NZY4 707 aaKnown RBP5.83□□□□□ -1.48
BRCA1-204ENST00000412061 DDX46Q7L014 1031 aaKnown RBP5.83□□□□□ -1.48
BRCA1-204ENST00000412061 DDX53Q86TM3 631 aaKnown RBP5.83□□□□□ -1.48
BRCA1-204ENST00000412061 VSIG10LQ86VR7 867 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 ZC3H7AQ8IWR0 971 aaKnown RBP5.83□□□□□ -1.48
BRCA1-204ENST00000412061 MYO1HQ8N1T3 1032 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 IL17RAQ96F46 866 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 CHAMP1Q96JM3 812 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 ALPK1Q96QP1 1244 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 GOLGA2P5Q9HBQ8 144 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 SLAMF8Q9P0V8 285 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 PNMA2Q9UL42 364 aa5.83□□□□□ -1.48
BRCA1-204ENST00000412061 A0A1W2PQ45 241 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-204ENST00000412061 A0A1W2PQY0 241 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 FAM83GA6ND36 823 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 KPNA6O60684 536 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 WDHD1O75717 1129 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-204ENST00000412061 SOD2P04179 222 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 MYL1P05976 194 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 ZGLP1P0C6A0 271 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 CPEP16870 476 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 ZFYVE27Q5T4F4 411 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 CDCA2Q69YH5 1023 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-204ENST00000412061 SPRED2Q7Z698 418 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 ANKLE2Q86XL3 938 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 CHPFQ8IZ52 775 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 LEO1Q8WVC0 666 aaPredicted RBP5.82□□□□□ -1.48
BRCA1-204ENST00000412061 LINC01599Q8WXQ3 324 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 SLC39A13Q96H72 371 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 HHIPL1Q96JK4 782 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 G6PC3Q9BUM1 346 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 MAF1Q9H063 256 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 CHST12Q9NRB3 414 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 SAMD15Q9P1V8 674 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 CCDC39Q9UFE4 941 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 TMEM59LQ9UK28 342 aa5.82□□□□□ -1.48
BRCA1-204ENST00000412061 CCDC189A1A4V9 331 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 FAM47E-STBD1D6RA91 191 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 KCNA6P17658 529 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 GRK2P25098 689 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 GRK3P35626 688 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 PDE6BP35913 854 aa5.81□□□□□ -1.48
BRCA1-204ENST00000412061 BCL6P41182 706 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms