RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 TANC1Q9C0D5 1861 aa25.87■■□□□ 1.73
MSH6-202ENST00000411819 SCN5AQ14524 2016 aa25.87■■□□□ 1.73
MSH6-202ENST00000411819 MYH7BA7E2Y1 1941 aa25.87■■□□□ 1.73
MSH6-202ENST00000411819 DLL1O00548 723 aa25.87■■□□□ 1.73
MSH6-202ENST00000411819 CYTH3O43739 400 aa25.87■■□□□ 1.73
MSH6-202ENST00000411819 PBX2P40425 430 aa25.87■■□□□ 1.73
MSH6-202ENST00000411819 RPUSD2Q8IZ73 545 aaKnown RBP25.87■■□□□ 1.73
MSH6-202ENST00000411819 PDCD2LQ9BRP1 358 aa25.87■■□□□ 1.73
MSH6-202ENST00000411819 PNMA6FA0A0J9YX94 578 aa25.86■■□□□ 1.73
MSH6-202ENST00000411819 ZBBXA8MT70 800 aa25.86■■□□□ 1.73
MSH6-202ENST00000411819 GCOM1H8Y6P7 765 aaPredicted RBP25.86■■□□□ 1.73
MSH6-202ENST00000411819 POLR2MP0CAP2 368 aa25.86■■□□□ 1.73
MSH6-202ENST00000411819 PTPN11Q06124 597 aaPredicted RBP25.86■■□□□ 1.73
MSH6-202ENST00000411819 CTCFLQ8NI51 663 aaPredicted RBP25.86■■□□□ 1.73
MSH6-202ENST00000411819 IGDCC4Q8TDY8 1250 aa25.86■■□□□ 1.73
MSH6-202ENST00000411819 MYL10Q9BUA6 226 aa25.86■■□□□ 1.73
MSH6-202ENST00000411819 ZNF576Q9H609 170 aa25.86■■□□□ 1.73
MSH6-202ENST00000411819 DDX41Q9UJV9 622 aaKnown RBP25.86■■□□□ 1.73
MSH6-202ENST00000411819 PRC1O43663 620 aa25.85■■□□□ 1.73
MSH6-202ENST00000411819 CASTP20810 708 aaKnown RBP25.85■■□□□ 1.73
MSH6-202ENST00000411819 GRIN2CQ14957 1233 aa25.85■■□□□ 1.73
MSH6-202ENST00000411819 PGM5Q15124 567 aa25.85■■□□□ 1.73
MSH6-202ENST00000411819 DEFB128Q7Z7B8 93 aa25.85■■□□□ 1.73
MSH6-202ENST00000411819 FCHSD1Q86WN1 690 aa25.85■■□□□ 1.73
MSH6-202ENST00000411819 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.85■■□□□ 1.73
MSH6-202ENST00000411819 ZNF654Q8IZM8 581 aa25.85■■□□□ 1.73
MSH6-202ENST00000411819 SAMD3Q8N6K7 520 aa25.85■■□□□ 1.73
MSH6-202ENST00000411819 ESYT1Q9BSJ8 1104 aa25.85■■□□□ 1.73
MSH6-202ENST00000411819 LSG1Q9H089 658 aaKnown RBP25.85■■□□□ 1.73
MSH6-202ENST00000411819 LY9Q9HBG7 655 aa25.85■■□□□ 1.73
MSH6-202ENST00000411819 DGKDQ16760 1214 aa25.84■■□□□ 1.73
MSH6-202ENST00000411819 NFXL1Q6ZNB6 911 aa25.84■■□□□ 1.73
MSH6-202ENST00000411819 DHX37Q8IY37 1157 aaKnown RBP25.84■■□□□ 1.73
MSH6-202ENST00000411819 IL31RAQ8NI17 732 aa25.84■■□□□ 1.73
MSH6-202ENST00000411819 ANO2Q9NQ90 1003 aa25.84■■□□□ 1.73
MSH6-202ENST00000411819 MSRAQ9UJ68 235 aa25.84■■□□□ 1.73
MSH6-202ENST00000411819 SORBS3O60504 671 aa25.83■■□□□ 1.73
MSH6-202ENST00000411819 DDAH1O94760 285 aa25.83■■□□□ 1.73
MSH6-202ENST00000411819 CCND2P30279 289 aa25.83■■□□□ 1.73
MSH6-202ENST00000411819 RAB30Q15771 203 aa25.83■■□□□ 1.73
MSH6-202ENST00000411819 RETREG2Q8NC44 543 aa25.83■■□□□ 1.73
MSH6-202ENST00000411819 SLC27A2O14975 620 aa25.82■■□□□ 1.72
MSH6-202ENST00000411819 PFKMP08237 780 aa25.82■■□□□ 1.72
MSH6-202ENST00000411819 KIF5BP33176 963 aa25.82■■□□□ 1.72
MSH6-202ENST00000411819 MCM5P33992 734 aa25.82■■□□□ 1.72
MSH6-202ENST00000411819 LAMC2Q13753 1193 aa25.82■■□□□ 1.72
MSH6-202ENST00000411819 PTGISQ16647 500 aa25.82■■□□□ 1.72
MSH6-202ENST00000411819 EMID1Q96A84 441 aaPredicted RBP25.82■■□□□ 1.72
MSH6-202ENST00000411819 ZFP91Q96JP5 570 aaPredicted RBP25.82■■□□□ 1.72
MSH6-202ENST00000411819 SLC4A7Q9Y6M7 1214 aa25.82■■□□□ 1.72
MSH6-202ENST00000411819 CCDC69A6NI79 296 aa25.81■■□□□ 1.72
MSH6-202ENST00000411819 PITPNM1O00562 1244 aa25.81■■□□□ 1.72
MSH6-202ENST00000411819 RGS20O76081 388 aa25.81■■□□□ 1.72
MSH6-202ENST00000411819 ZNF286BP0CG31 522 aa25.81■■□□□ 1.72
MSH6-202ENST00000411819 BFSP2Q13515 415 aa25.81■■□□□ 1.72
MSH6-202ENST00000411819 SKAP1Q86WV1 359 aa25.81■■□□□ 1.72
MSH6-202ENST00000411819 PPTC7Q8NI37 304 aa25.81■■□□□ 1.72
MSH6-202ENST00000411819 KAT2BQ92831 832 aa25.81■■□□□ 1.72
MSH6-202ENST00000411819 RRP36Q96EU6 259 aaKnown RBP25.81■■□□□ 1.72
MSH6-202ENST00000411819 KATNAL1Q9BW62 490 aa25.81■■□□□ 1.72
MSH6-202ENST00000411819 SEC63Q9UGP8 760 aaKnown RBP25.81■■□□□ 1.72
MSH6-202ENST00000411819 TRIP12Q14669 1992 aaPredicted RBP25.8■■□□□ 1.72
MSH6-202ENST00000411819 SH2B2O14492 632 aaPredicted RBP25.8■■□□□ 1.72
MSH6-202ENST00000411819 GGPS1O95749 300 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 CREB3L3Q68CJ9 461 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 GDF6Q6KF10 455 aaPredicted RBP25.8■■□□□ 1.72
MSH6-202ENST00000411819 KCNV1Q6PIU1 500 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 CENPQQ7L2Z9 268 aaPredicted RBP25.8■■□□□ 1.72
MSH6-202ENST00000411819 VSIG10LQ86VR7 867 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 CCDC155Q8N6L0 562 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 TMEM87BQ96K49 555 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 MAP3K14Q99558 947 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 ALG1Q9BT22 464 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 MTA3Q9BTC8 594 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 SPZ1Q9BXG8 430 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 NKX2-4Q9H2Z4 354 aa25.8■■□□□ 1.72
MSH6-202ENST00000411819 ACTN1P12814 892 aa25.79■■□□□ 1.72
MSH6-202ENST00000411819 RXRAP19793 462 aa25.79■■□□□ 1.72
MSH6-202ENST00000411819 RFC2P35250 354 aa25.79■■□□□ 1.72
MSH6-202ENST00000411819 PSEN2P49810 448 aa25.79■■□□□ 1.72
MSH6-202ENST00000411819 SESTD1Q86VW0 696 aa25.79■■□□□ 1.72
MSH6-202ENST00000411819 C7orf31Q8N865 590 aa25.79■■□□□ 1.72
MSH6-202ENST00000411819 VWCEQ96DN2 955 aa25.79■■□□□ 1.72
MSH6-202ENST00000411819 SPATA33Q96N06 139 aa25.79■■□□□ 1.72
MSH6-202ENST00000411819 MYO9BQ13459 2157 aa25.78■■□□□ 1.72
MSH6-202ENST00000411819 IQCF3P0C7M6 154 aa25.78■■□□□ 1.72
MSH6-202ENST00000411819 UBA1P22314 1058 aaKnown RBP25.78■■□□□ 1.72
MSH6-202ENST00000411819 MFSD10Q14728 455 aa25.78■■□□□ 1.72
MSH6-202ENST00000411819 BMP2KLQ5H9B9 411 aa25.78■■□□□ 1.72
MSH6-202ENST00000411819 TMTC2Q8N394 836 aa25.78■■□□□ 1.72
MSH6-202ENST00000411819 GAS2L1Q99501 681 aaPredicted RBP25.78■■□□□ 1.72
MSH6-202ENST00000411819 FTOQ9C0B1 505 aaKnown RBP eCLIP25.78■■□□□ 1.72
MSH6-202ENST00000411819 SLC28A3Q9HAS3 691 aa25.78■■□□□ 1.72
MSH6-202ENST00000411819 PLEKHA8P1O95397 391 aa25.77■■□□□ 1.72
MSH6-202ENST00000411819 F2P00734 622 aa25.77■■□□□ 1.72
MSH6-202ENST00000411819 ATP2A2P16615 1042 aaKnown RBP25.77■■□□□ 1.72
MSH6-202ENST00000411819 RABGGTBP53611 331 aa25.77■■□□□ 1.72
MSH6-202ENST00000411819 COL9A3Q14050 684 aaPredicted RBP25.77■■□□□ 1.72
MSH6-202ENST00000411819 KIAA0753Q2KHM9 967 aa25.77■■□□□ 1.72
MSH6-202ENST00000411819 CELF3Q5SZQ8 465 aaKnown RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms