RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 IGDCC4Q8TDY8 1250 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 SCLYQ96I15 445 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 GAS2L1Q99501 681 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-210ENST00000409954 SLC28A3Q9HAS3 691 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 CXXC1Q9P0U4 656 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-210ENST00000409954 MRVI1Q9Y6F6 885 aa16.84■□□□□ 0.29
MCF2L-210ENST00000409954 OPLAHO14841 1288 aa16.83■□□□□ 0.28
MCF2L-210ENST00000409954 MMP3P08254 477 aa16.83■□□□□ 0.28
MCF2L-210ENST00000409954 IQCF3P0C7M6 154 aa16.83■□□□□ 0.28
MCF2L-210ENST00000409954 PBX2P40425 430 aa16.83■□□□□ 0.28
MCF2L-210ENST00000409954 TMEM67Q5HYA8 995 aa16.83■□□□□ 0.28
MCF2L-210ENST00000409954 CHST3Q7LGC8 479 aa16.83■□□□□ 0.28
MCF2L-210ENST00000409954 CCDC155Q8N6L0 562 aa16.83■□□□□ 0.28
MCF2L-210ENST00000409954 PIGSQ96S52 555 aa16.83■□□□□ 0.28
MCF2L-210ENST00000409954 PDCD2LQ9BRP1 358 aa16.83■□□□□ 0.28
MCF2L-210ENST00000409954 PPP1R11O60927 126 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-210ENST00000409954 PARNO95453 639 aaKnown RBP16.82■□□□□ 0.28
MCF2L-210ENST00000409954 MYCLP12524 364 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-210ENST00000409954 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-210ENST00000409954 PTGISQ16647 500 aa16.82■□□□□ 0.28
MCF2L-210ENST00000409954 HOMER1Q86YM7 354 aa16.82■□□□□ 0.28
MCF2L-210ENST00000409954 PPTC7Q8NI37 304 aa16.82■□□□□ 0.28
MCF2L-210ENST00000409954 CAGE1Q8TC20 777 aa16.82■□□□□ 0.28
MCF2L-210ENST00000409954 PHOSPHO2Q8TCD6 241 aa16.82■□□□□ 0.28
MCF2L-210ENST00000409954 LZTS2Q9BRK4 669 aa16.82■□□□□ 0.28
MCF2L-210ENST00000409954 KATNAL1Q9BW62 490 aa16.82■□□□□ 0.28
MCF2L-210ENST00000409954 PCDHA11Q9Y5I1 949 aa16.82■□□□□ 0.28
MCF2L-210ENST00000409954 ZBBXA8MT70 800 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 CYTH3O43739 400 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 ATP2A2P16615 1042 aaKnown RBP16.81■□□□□ 0.28
MCF2L-210ENST00000409954 CCND2P30279 289 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 KIF5BP33176 963 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 CHMP4BP1P59074 171 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 PGM5Q15124 567 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 MYSM1Q5VVJ2 828 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 CASC1Q6TDU7 716 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 DEFB128Q7Z7B8 93 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 C7orf31Q8N865 590 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 KAT2BQ92831 832 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 VWCEQ96DN2 955 aa16.81■□□□□ 0.28
MCF2L-210ENST00000409954 RBM8AQ9Y5S9 174 aaKnown RBP16.81■□□□□ 0.28
MCF2L-210ENST00000409954 COL6A3P12111 3177 aa16.8■□□□□ 0.28
MCF2L-210ENST00000409954 STAM2O75886 525 aa16.8■□□□□ 0.28
MCF2L-210ENST00000409954 HOXA13P31271 388 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-210ENST00000409954 GNAQP50148 359 aa16.8■□□□□ 0.28
MCF2L-210ENST00000409954 CELF3Q5SZQ8 465 aaKnown RBP16.8■□□□□ 0.28
MCF2L-210ENST00000409954 MB21D2Q8IYB1 491 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-210ENST00000409954 CTCFLQ8NI51 663 aaPredicted RBP16.8■□□□□ 0.28
MCF2L-210ENST00000409954 AFAP1L1Q8TED9 768 aa16.8■□□□□ 0.28
MCF2L-210ENST00000409954 FTOQ9C0B1 505 aaKnown RBP eCLIP16.8■□□□□ 0.28
MCF2L-210ENST00000409954 KIF28PB7ZC32 967 aa16.79■□□□□ 0.28
MCF2L-210ENST00000409954 RGS20O76081 388 aa16.79■□□□□ 0.28
MCF2L-210ENST00000409954 MCM5P33992 734 aa16.79■□□□□ 0.28
MCF2L-210ENST00000409954 PSEN2P49810 448 aa16.79■□□□□ 0.28
MCF2L-210ENST00000409954 SLC35G1Q2M3R5 365 aa16.79■□□□□ 0.28
MCF2L-210ENST00000409954 FCHSD1Q86WN1 690 aa16.79■□□□□ 0.28
MCF2L-210ENST00000409954 SYMPKQ92797 1274 aaKnown RBP16.79■□□□□ 0.28
MCF2L-210ENST00000409954 RRP36Q96EU6 259 aaKnown RBP16.79■□□□□ 0.28
MCF2L-210ENST00000409954 TMEM87BQ96K49 555 aa16.79■□□□□ 0.28
MCF2L-210ENST00000409954 COL25A1Q9BXS0 654 aaPredicted RBP16.79■□□□□ 0.28
MCF2L-210ENST00000409954 NKX2-4Q9H2Z4 354 aa16.79■□□□□ 0.28
MCF2L-210ENST00000409954 SENP2Q9HC62 589 aa16.79■□□□□ 0.28
MCF2L-210ENST00000409954 GTF2IRD1Q9UHL9 959 aa16.79■□□□□ 0.28
MCF2L-210ENST00000409954 LCTP09848 1927 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 HAS3O00219 553 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 DDAH1O94760 285 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 CALM1P0DP23 149 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 CALM2P0DP24 149 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 CALM3P0DP25 149 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 HOXD8P13378 290 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-210ENST00000409954 ANTXR2P58335 489 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 RBL2Q08999 1139 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 GNPTABQ3T906 1256 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 GDF6Q6KF10 455 aaPredicted RBP16.78■□□□□ 0.28
MCF2L-210ENST00000409954 XRRA1Q6P2D8 792 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 SPATA33Q96N06 139 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 SLC9A7Q96T83 725 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 SPZ1Q9BXG8 430 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 PRDM12Q9H4Q4 367 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 MLXIPQ9HAP2 919 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 HDAC6Q9UBN7 1215 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 TAF6LQ9Y6J9 622 aa16.78■□□□□ 0.28
MCF2L-210ENST00000409954 LRRC37A2A6NM11 1700 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 CCDC69A6NI79 296 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 PRC1O43663 620 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 BAIAP3O94812 1187 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 GGPS1O95749 300 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 F2P00734 622 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 SELPP16109 830 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 LIFRP42702 1097 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 PTK7Q13308 1070 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 NEDD9Q14511 834 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 MFSD10Q14728 455 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 KIAA0753Q2KHM9 967 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 NFXL1Q6ZNB6 911 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 ZNF654Q8IZM8 581 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 PPP1R13LQ8WUF5 828 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 CUL5Q93034 780 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 ALG1Q9BT22 464 aa16.77■□□□□ 0.28
MCF2L-210ENST00000409954 LY9Q9HBG7 655 aa16.77■□□□□ 0.28
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