RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 PPP1R11O60927 126 aaPredicted RBP4.85□□□□□ -1.63
SMC6-203ENST00000402989 RHOBTB3O94955 611 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 MOCS3O95396 460 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 MMP10P09238 476 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 ARHGAP25P42331 645 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 DNM2P50570 870 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 PPP4CP60510 307 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 HERVK_113P62684 666 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 PLS1Q14651 629 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 SEPT2Q15019 361 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 ECM1Q16610 540 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 HERC4Q5GLZ8 1057 aaPredicted RBP4.85□□□□□ -1.63
SMC6-203ENST00000402989 CDC42EP5Q6NZY7 148 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 CNNM4Q6P4Q7 775 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 TMED8Q6PL24 325 aaPredicted RBP4.85□□□□□ -1.63
SMC6-203ENST00000402989 GIMAP8Q8ND71 665 aaPredicted RBP4.85□□□□□ -1.63
SMC6-203ENST00000402989 QTRT2Q9H974 415 aaKnown RBP4.85□□□□□ -1.63
SMC6-203ENST00000402989 JMJD4Q9H9V9 463 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 BMP2KQ9NSY1 1161 aaPredicted RBP4.85□□□□□ -1.63
SMC6-203ENST00000402989 BCS1LQ9Y276 419 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 PCDHA1Q9Y5I3 950 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 CLRN2A0PK11 232 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 BICDL2A1A5D9 508 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 POTEFA5A3E0 1075 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 SFI1A8K8P3 1242 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 M0R2N6 131 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 TTLL1O95922 423 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 TUBB4AP04350 444 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 POTEIP0CG38 1075 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 CYLC1P35663 651 aaPredicted RBP4.85□□□□□ -1.63
SMC6-203ENST00000402989 ZNF76P36508 570 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 EIF4A3P38919 411 aaKnown RBP4.85□□□□□ -1.63
SMC6-203ENST00000402989 PABPC4Q13310 644 aaKnown RBP eCLIP4.85□□□□□ -1.63
SMC6-203ENST00000402989 WDR59Q6PJI9 974 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 POTEGQ6S5H5 508 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 POTEEQ6S8J3 1075 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 CCDC84Q86UT8 332 aaPredicted RBP4.85□□□□□ -1.63
SMC6-203ENST00000402989 GPBP1Q86WP2 473 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 CEP112Q8N8E3 955 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 RABGGTAQ92696 567 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 CUL5Q93034 780 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 TEKT1Q969V4 418 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 PNMA5Q96PV4 448 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 MMS19Q96T76 1030 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 CCSER1Q9C0I3 900 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 PCDHA12Q9UN75 941 aa4.85□□□□□ -1.63
SMC6-203ENST00000402989 EEF2P13639 858 aaKnown RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 EEF1GP26641 437 aaKnown RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 CHRNA5P30532 468 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 SLC7A5Q01650 507 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 GABPB1Q06547 395 aaPredicted RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 PDE4CQ08493 712 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 KIF5AQ12840 1032 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 RAPGEF1Q13905 1077 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 DCAF17Q5H9S7 520 aaPredicted RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 CCDC174Q6PII3 467 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 MAEAQ7L5Y9 396 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 TBC1D22AQ8WUA7 517 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 CCDC51Q96ER9 411 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 LZTS2Q9BRK4 669 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 RAB34Q9BZG1 259 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 THAP9Q9H5L6 903 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 BCAS3Q9H6U6 928 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 TDRD3Q9H7E2 651 aaKnown RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 ANKZF1Q9H8Y5 726 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 BLOC1S4Q9NUP1 217 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 PANK4Q9NVE7 773 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 IRS2Q9Y4H2 1338 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 LRRC53A6NM62 1247 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 TCP10L2B9ZVM9 353 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 H3BQF6 201 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 KRT86O43790 486 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 BBOX1O75936 387 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 HSPA1LP34931 641 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 CRKP46108 304 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 RASSF7Q02833 373 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 ZNF543Q08ER8 600 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 TRIM14Q14142 442 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 QRICH1Q2TAL8 776 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 CERKLQ49MI3 558 aaPredicted RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 CCDC181Q5TID7 509 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 RSRC2Q7L4I2 434 aaKnown RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 FAM114A1Q8IWE2 563 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 PROCA1Q8NCQ7 364 aaPredicted RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 TSG101Q99816 390 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 LSM14BQ9BX40 385 aaKnown RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 IFIH1Q9BYX4 1025 aaKnown RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 IKZF4Q9H2S9 585 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 NDST4Q9H3R1 872 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 MYH10P35580 1976 aa4.84□□□□□ -1.63
SMC6-203ENST00000402989 PDS5AQ29RF7 1337 aaKnown RBP4.84□□□□□ -1.63
SMC6-203ENST00000402989 KIF13BQ9NQT8 1826 aa4.84□□□□□ -1.64
SMC6-203ENST00000402989 NAV1Q8NEY1 1877 aa4.84□□□□□ -1.64
SMC6-203ENST00000402989 DDTLA6NHG4 134 aaPredicted RBP4.84□□□□□ -1.64
SMC6-203ENST00000402989 DDX39AO00148 427 aaKnown RBP4.84□□□□□ -1.64
SMC6-203ENST00000402989 POLRMTO00411 1230 aaKnown RBP4.84□□□□□ -1.64
SMC6-203ENST00000402989 ERLIN1O75477 346 aa4.84□□□□□ -1.64
SMC6-203ENST00000402989 IL1R1P14778 569 aa4.84□□□□□ -1.64
SMC6-203ENST00000402989 SHMT1P34896 483 aa4.84□□□□□ -1.64
SMC6-203ENST00000402989 MRPL12P52815 198 aaKnown RBP4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms