RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CDC23Q9UJX2 597 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 CHD1O14646 1710 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 CYP2D6P10635 497 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 NPR1P16066 1061 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 PRDX5P30044 214 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 SH3RF3Q8TEJ3 882 aaPredicted RBP19.87■□□□□ 0.77
COL18A1-204ENST00000400337 COA1Q9GZY4 146 aa19.87■□□□□ 0.77
COL18A1-204ENST00000400337 RXRBP28702 533 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 CNGA1P29973 690 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 SEPT14Q6ZU15 432 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 DGKHQ86XP1 1220 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 STAG1Q8WVM7 1258 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 GMNNO75496 209 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 P3H4Q92791 437 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 POLR2BP30876 1174 aaKnown RBP19.86■□□□□ 0.77
COL18A1-204ENST00000400337 TPD52P55327 224 aaPredicted RBP19.86■□□□□ 0.77
COL18A1-204ENST00000400337 MESDQ14696 234 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 TRIM50Q86XT4 487 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 UHMK1Q8TAS1 419 aaKnown RBP19.86■□□□□ 0.77
COL18A1-204ENST00000400337 PCIF1Q9H4Z3 704 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 LMNB1P20700 586 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 STX2P32856 288 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 MAN1A1P33908 653 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 CAPN12Q6ZSI9 719 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 RETREG2Q8NC44 543 aa19.86■□□□□ 0.77
COL18A1-204ENST00000400337 GIPC1O14908 333 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 MMP10P09238 476 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 PPP2R5AQ15172 486 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 CEP170P1Q96L14 293 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 MINPP1Q9UNW1 487 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 NEDD4P46934 1319 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 RPAP1Q9BWH6 1393 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-204ENST00000400337 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 GUCY2DQ02846 1103 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 KAZNQ674X7 775 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 SDCCAG8Q86SQ7 713 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-204ENST00000400337 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 MCUR1Q96AQ8 359 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 RSRC1Q96IZ7 334 aaKnown RBP19.85■□□□□ 0.77
COL18A1-204ENST00000400337 KMT5AQ9NQR1 393 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 PNMA6FA0A0J9YX94 578 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 CCDC93Q567U6 631 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-204ENST00000400337 ACCSQ96QU6 501 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 LRRN2O75325 713 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 CCDC62Q6P9F0 684 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 TAB3Q8N5C8 712 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-204ENST00000400337 EMILIN3Q9NT22 766 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 TRPM1Q7Z4N2 1603 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 SH3BP5O60239 455 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 PPFIA4O75335 1185 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 CCNE1P24864 410 aa19.85■□□□□ 0.77
COL18A1-204ENST00000400337 HOXA13P31271 388 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-204ENST00000400337 SPOUT1Q5T280 376 aaKnown RBP19.85■□□□□ 0.77
COL18A1-204ENST00000400337 PNMA8AQ86V59 439 aaPredicted RBP19.85■□□□□ 0.77
COL18A1-204ENST00000400337 PLA2G4BP0C869 781 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 SNAP25P60880 206 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 SLC17A8Q8NDX2 589 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 ARHGEF2Q92974 986 aaKnown RBP19.84■□□□□ 0.77
COL18A1-204ENST00000400337 DDX23Q9BUQ8 820 aaKnown RBP19.84■□□□□ 0.77
COL18A1-204ENST00000400337 ATP1A2P50993 1020 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 TMTC3Q6ZXV5 915 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 SRGAP1Q7Z6B7 1085 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 PFDN4Q9NQP4 134 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 DISC1Q9NRI5 854 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 PCDHB4Q9Y5E5 795 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 MYO1FO00160 1098 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 ARHGAP25P42331 645 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 TFDP1Q14186 410 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 CACNB3P54284 484 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 BPIFB4P59827 614 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 GNGT1P63211 74 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 KMT5BQ4FZB7 885 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 DPP9Q86TI2 863 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 ZNF148Q9UQR1 794 aa19.84■□□□□ 0.77
COL18A1-204ENST00000400337 INO80B-WBP1J3KQ70 363 aa19.83■□□□□ 0.77
COL18A1-204ENST00000400337 RNF8O76064 485 aa19.83■□□□□ 0.77
COL18A1-204ENST00000400337 CYB5R4Q7L1T6 521 aa19.83■□□□□ 0.77
COL18A1-204ENST00000400337 ACRBPQ8NEB7 543 aa19.83■□□□□ 0.77
COL18A1-204ENST00000400337 INO80BQ9C086 356 aaPredicted RBP19.83■□□□□ 0.77
COL18A1-204ENST00000400337 APOL6Q9BWW8 343 aa19.83■□□□□ 0.77
COL18A1-204ENST00000400337 MIS12Q9H081 205 aa19.83■□□□□ 0.77
COL18A1-204ENST00000400337 SOWAHDA6NJG2 315 aa19.83■□□□□ 0.76
COL18A1-204ENST00000400337 SLC12A2P55011 1212 aa19.83■□□□□ 0.76
COL18A1-204ENST00000400337 BFSP1Q12934 665 aa19.83■□□□□ 0.76
COL18A1-204ENST00000400337 SUPT20HL1Q3ZLR7 823 aa19.83■□□□□ 0.76
COL18A1-204ENST00000400337 ARL6IP4Q66PJ3 421 aaKnown RBP19.83■□□□□ 0.76
COL18A1-204ENST00000400337 FOXP4Q8IVH2 680 aaPredicted RBP19.83■□□□□ 0.76
COL18A1-204ENST00000400337 ATP2A3Q93084 1043 aa19.83■□□□□ 0.76
COL18A1-204ENST00000400337 IFRD2Q12894 506 aaPredicted RBP19.83■□□□□ 0.76
COL18A1-204ENST00000400337 VSTM4Q8IW00 320 aa19.83■□□□□ 0.76
COL18A1-204ENST00000400337 AFAP1L2Q8N4X5 818 aa19.83■□□□□ 0.76
COL18A1-204ENST00000400337 FAM133AQ8N9E0 248 aa19.83■□□□□ 0.76
COL18A1-204ENST00000400337 NARFQ9UHQ1 456 aa19.83■□□□□ 0.76
COL18A1-204ENST00000400337 GLI2P10070 1586 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 THAP12O43422 761 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 ATP1A3P13637 1013 aa19.82■□□□□ 0.76
COL18A1-204ENST00000400337 CELF1Q92879 486 aaKnown RBP19.82■□□□□ 0.76
COL18A1-204ENST00000400337 PALM3A6NDB9 673 aaPredicted RBP19.82■□□□□ 0.76
COL18A1-204ENST00000400337 SARNPP82979 210 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms