RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 GRAPLQ8TC17 118 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-205ENST00000398978 CUEDC2Q9H467 287 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 POLD4Q9HCU8 107 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 CNTNAP4Q9C0A0 1308 aa21.69■■□□□ 1.06
COL13A1-205ENST00000398978 NPHP3-ACAD11A0A0J9YXS1 232 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 MYO1CO00159 1063 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 PPP4CP60510 307 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 TUBB4BP68371 445 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 CKAP4Q07065 602 aaKnown RBP21.68■■□□□ 1.06
COL13A1-205ENST00000398978 TDRD12Q587J7 1177 aaKnown RBP21.68■■□□□ 1.06
COL13A1-205ENST00000398978 CCNI2Q6ZMN8 369 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-205ENST00000398978 ROBO3Q96MS0 1386 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 COL5A3P25940 1745 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-205ENST00000398978 RFC4P35249 363 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 TTC19Q6DKK2 380 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-205ENST00000398978 LRRC31Q6UY01 552 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 SND1Q7KZF4 910 aaKnown RBP eCLIP21.68■■□□□ 1.06
COL13A1-205ENST00000398978 DNAAF5Q86Y56 855 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 RETREG2Q8NC44 543 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 C8orf37Q96NL8 207 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 SNX12Q9UMY4 172 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 PLAGL2Q9UPG8 496 aa21.68■■□□□ 1.06
COL13A1-205ENST00000398978 ZC3H4Q9UPT8 1303 aaKnown RBP21.68■■□□□ 1.06
COL13A1-205ENST00000398978 PDHBP11177 359 aa21.67■■□□□ 1.06
COL13A1-205ENST00000398978 PTPROQ16827 1216 aa21.67■■□□□ 1.06
COL13A1-205ENST00000398978 DNAJC21Q5F1R6 531 aaKnown RBP21.67■■□□□ 1.06
COL13A1-205ENST00000398978 MTMR9Q96QG7 549 aa21.67■■□□□ 1.06
COL13A1-205ENST00000398978 PURBQ96QR8 312 aaKnown RBP21.67■■□□□ 1.06
COL13A1-205ENST00000398978 SH2D4AQ9H788 454 aa21.67■■□□□ 1.06
COL13A1-205ENST00000398978 LDHCP07864 332 aa21.67■■□□□ 1.06
COL13A1-205ENST00000398978 AKR1B1P15121 316 aa21.67■■□□□ 1.06
COL13A1-205ENST00000398978 SLC1A4P43007 532 aa21.67■■□□□ 1.06
COL13A1-205ENST00000398978 CACNA2D4Q7Z3S7 1137 aa21.67■■□□□ 1.06
COL13A1-205ENST00000398978 EHD4Q9H223 541 aa21.67■■□□□ 1.06
COL13A1-205ENST00000398978 RRP15Q9Y3B9 282 aaKnown RBP21.67■■□□□ 1.06
COL13A1-205ENST00000398978 AGPSO00116 658 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 MARCH6O60337 910 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 TACC1O75410 805 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 MAGEA1P43355 309 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 PPARDQ03181 441 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 LZTS2Q9BRK4 669 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 USO1O60763 962 aaKnown RBP21.66■■□□□ 1.06
COL13A1-205ENST00000398978 DPP8Q6V1X1 898 aaPredicted RBP21.66■■□□□ 1.06
COL13A1-205ENST00000398978 UNC13DQ70J99 1090 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 AFAP1L1Q8TED9 768 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 MTMR8Q96EF0 704 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 MXD3Q9BW11 206 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 ACBD3Q9H3P7 528 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 TNRC6CQ9HCJ0 1690 aaKnown RBP21.66■■□□□ 1.06
COL13A1-205ENST00000398978 PRPF6O94906 941 aaKnown RBP21.66■■□□□ 1.06
COL13A1-205ENST00000398978 RHBDL3P58872 404 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 CNBD1Q8NA66 436 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 OSBPL9Q96SU4 736 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 ZHX3Q9H4I2 956 aa21.66■■□□□ 1.06
COL13A1-205ENST00000398978 PACSIN2Q9UNF0 486 aaPredicted RBP21.66■■□□□ 1.06
COL13A1-205ENST00000398978 RIMBP2O15034 1052 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 ADCY7P51828 1080 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 MAN2A1Q16706 1144 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 MAP9Q49MG5 647 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 MAGEF1Q9HAY2 307 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 CWC15Q9P013 229 aaKnown RBP21.65■■□□□ 1.06
COL13A1-205ENST00000398978 LEMD3Q9Y2U8 911 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 TRAF5O00463 557 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 BARGINQ6ZT62 677 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 GOLGA6L1Q8N7Z2 621 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 SPATA4Q8NEY3 305 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 RAD54LQ92698 747 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 MED4Q9NPJ6 270 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 NAV1Q8NEY1 1877 aa21.65■■□□□ 1.06
COL13A1-205ENST00000398978 KCNMA1Q12791 1236 aa21.64■■□□□ 1.06
COL13A1-205ENST00000398978 LRRC55Q6ZSA7 311 aa21.64■■□□□ 1.06
COL13A1-205ENST00000398978 KCTD1Q719H9 257 aa21.64■■□□□ 1.06
COL13A1-205ENST00000398978 BBXQ8WY36 941 aaPredicted RBP21.64■■□□□ 1.06
COL13A1-205ENST00000398978 JRKLQ9Y4A0 524 aa21.64■■□□□ 1.06
COL13A1-205ENST00000398978 ZSCAN5CA6NGD5 496 aaPredicted RBP21.64■■□□□ 1.05
COL13A1-205ENST00000398978 E9PMD0 336 aa21.64■■□□□ 1.05
COL13A1-205ENST00000398978 PPP1R11O60927 126 aaPredicted RBP21.64■■□□□ 1.05
COL13A1-205ENST00000398978 CCDC181Q5TID7 509 aa21.64■■□□□ 1.05
COL13A1-205ENST00000398978 SRLQ86TD4 932 aa21.64■■□□□ 1.05
COL13A1-205ENST00000398978 TRIM58Q8NG06 486 aa21.64■■□□□ 1.05
COL13A1-205ENST00000398978 BAP1Q92560 729 aa21.64■■□□□ 1.05
COL13A1-205ENST00000398978 ZNF287Q9HBT7 754 aa21.64■■□□□ 1.05
COL13A1-205ENST00000398978 GPR75-ASB3A0A0A6YYF3 556 aa21.64■■□□□ 1.05
COL13A1-205ENST00000398978 ESYT3A0FGR9 886 aa21.64■■□□□ 1.05
COL13A1-205ENST00000398978 TMEM266Q2M3C6 531 aa21.64■■□□□ 1.05
COL13A1-205ENST00000398978 KRT79Q5XKE5 535 aa21.64■■□□□ 1.05
COL13A1-205ENST00000398978 RPGRQ92834 1020 aaKnown RBP21.64■■□□□ 1.05
COL13A1-205ENST00000398978 A0A1W2PQJ5 194 aa21.63■■□□□ 1.05
COL13A1-205ENST00000398978 ANO9A1A5B4 782 aa21.63■■□□□ 1.05
COL13A1-205ENST00000398978 CCDC40Q4G0X9 1142 aa21.63■■□□□ 1.05
COL13A1-205ENST00000398978 DDX60LQ5H9U9 1706 aaKnown RBP21.63■■□□□ 1.05
COL13A1-205ENST00000398978 C6orf229H3BNL8 230 aa21.63■■□□□ 1.05
COL13A1-205ENST00000398978 TUBBP07437 444 aa21.63■■□□□ 1.05
COL13A1-205ENST00000398978 FAM196AQ6ZSG2 479 aa21.63■■□□□ 1.05
COL13A1-205ENST00000398978 FTCDO95954 541 aa21.62■■□□□ 1.05
COL13A1-205ENST00000398978 GTF2IP78347 998 aa21.62■■□□□ 1.05
COL13A1-205ENST00000398978 SHROOM1Q2M3G4 852 aaPredicted RBP21.62■■□□□ 1.05
COL13A1-205ENST00000398978 RIOX1Q9H6W3 641 aa21.62■■□□□ 1.05
COL13A1-205ENST00000398978 RBM12Q9NTZ6 932 aaKnown RBP21.62■■□□□ 1.05
COL13A1-205ENST00000398978 TARSL2A2RTX5 802 aaKnown RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms